EY710879

Overview
NameEY710879
Unique NameEY710879
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY710879_ssr296 microsatellite EY710879_ssr296:296..307. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
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BLAST of EY710879 vs. ExPASy Swiss-Prot
Match: IQD32_ARATH (Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQD32 PE=1 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 6.273e-13
Identity = 38/57 (66.67%), Postives = 46/57 (80.70%), Query Frame = 1 
Query:  595 QAAVRGILAQRELLKLKNVVXFAAAVRGHLVRRHAVGTLRCGQAIGKMQTLVRARYA 765
            QAAVRG LA+RELL+ K V+   AAVRGHLVR  A+G+LRC QAI KMQ +VRAR++
Sbjct:  222 QAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQAIVKMQAMVRARHS 278
The following BLAST results are available for this feature:
BLAST of EY710879 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IQD32_ARATH6.273e-1366.67Protein IQ-DOMAIN 32 OS=Arabidopsis thaliana GN=IQ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-C05-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710879 ID=EY710879; Name=EY710879; organism=Citrus sinensis; type=EST; length=918bp
CCACGCGTCCGCTTGTCTCCGCGAGACGGAGTGAGGTGTGTGCGCCAGGA
GGACCAGATAAGGAGAACAAACTAACCAAACAAAATGGGAAGATCAAATT
CTTGTTTCAAAATTATCACCTGCGGTAGCGACTCAGCTGGCAACGATGAT
CTTGATGTCTCCGAGGGTTAATTAGTATTTGAATATCTTTGTAGAGCAAG
GGCTCAAATGACAAACGTGGGTGGAGTTTCCGGAAGAAATCTGCCCGGCA
TCGAGTGCTAAGCAACAGTGTGGTAACAGAAACTGCTTCATCTGTAAAGA
AAGAAAGTCTGGAGACGGCTGATGTTAACTTCCAAACCCCTTCATCTGTA
AAGCAGAGTCTGGAGTCCACTGATGTTAGCTTCCAAACTCCTTCATCTGC
AAAGAAGGAGAGTCTGGAGTTGACTAATGTTAATTTTCAACCACCCAATA
TCTCCAATGTTCCAGAGAAATCCCCACCATACAGTGCATTGATGAGAAAC
CCCAGTTTCCAACTCCTGTGGAACCGAAACATCTGAGACATTATTGAGAC
AGATGCAGATGATTCCCCCTAGATGAGTCTGTTGTTATTGTCATCAGGCA
GCTGTCAGAGGGATCTTGGCTCAAAGAGAACTCTTAAAGCTTAAGAATGT
GGTTANGTTTGCAGCTGCTGTACGAGGACACTTGGTTCGGAGGCACGCTG
TGGGAACCCTACGGTGTGGTCAAGCCATTGGTAAGATGCAAACTCTTGTC
CGGGCTCGCTATGCTTGGTCTTGAAAAGGACCAAAATGGAAGGCAGAGGG
GAAACCTGCATTTTGGCCCCTCCAAGGGAACCTTAGTAACTAACCCAGTG
GACCCCCCCTTCTTTTTCAAACTGGTTAAAAAAGGTGTGCTCCCCCTTAT
GGGCCACCCCCAAAAAAA
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