EY710872

Overview
NameEY710872
Unique NameEY710872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length929
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1813 contig Csv1_Contig1813:141..1069. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY710872 vs. ExPASy Swiss-Prot
Match: BOR2_ARATH (Putative boron transporter 2 OS=Arabidopsis thaliana GN=At3g62270 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 5.296e-76
Identity = 143/221 (64.71%), Postives = 171/221 (77.38%), Query Frame = 1
Query:   13 VLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAISYNMTFEERAIDIDG-----GEILDEMITRSRGEIRHSQSPKITSSTPTSLEDKRSPHSPSMQRAYSPRVRELRVERSPSLSGKGLEVKKVPSPGPSNLGQSS 660
            VLWGYFAFMAIE+LPGNQFWERILLLFTAPSRR+KVLE+NHATF+ETVPFK+IA FT+FQT YLL CFG+TWIPIAGV+FPLLIM L+PVRQY+LP+FFK+ HLQDLDAAEYEEAPA+ +++   E  +          EILDE ITRSRGE RH+ SPK+TSST T +      ++ ++ + +SPRV +LR E SP LSGKG   +  P P P N   SS
Sbjct:  491 VLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDNHATFVETVPFKTIAMFTIFQTTYLLTCFGLTWIPIAGVMFPLLIMFLIPVRQYILPRFFKSAHLQDLDAAEYEEAPALPFHLAVPEAEMGSTASYPCDSEILDEFITRSRGEFRHTCSPKVTSSTSTPV------YNRNLSQVFSPRVIDLRGEMSPRLSGKG---QNSPKPSPLNPSSSS 702          
BLAST of EY710872 vs. ExPASy Swiss-Prot
Match: BOR1_ARATH (Boron transporter 1 OS=Arabidopsis thaliana GN=BOR1 PE=1 SV=1)

HSP 1 Score: 269.626 bits (688), Expect = 1.763e-71
Identity = 140/222 (63.06%), Postives = 170/222 (76.58%), Query Frame = 1
Query:   13 VLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAISYNMTFEER---AIDIDGG-EILDEMITRSRGEIRHSQSPKITSSTPTSLEDKRSPHSPSMQRAYSPRVRELRV-ERSPSLSGKGLEVKKVPSPGPSNLGQSSN 663
            VLWGYFAFMAIE+LPGNQFWERILLLFTAPSRR+KVLE+ HATF+ETVPFK+IA FTLFQT YLL+CFG+TWIPIAGV+FPL+IM L+PVRQYLLP+FFK  HLQDLDAAEYEEAPA+ +N+  E          G  EILDE++TRSRGE RH+ SPK+TSS+ T + ++      S+ + +SPRV  +R+ + SP + G      K  S G S L QSS+
Sbjct:  491 VLWGYFAFMAIESLPGNQFWERILLLFTAPSRRFKVLEDYHATFVETVPFKTIAMFTLFQTTYLLICFGLTWIPIAGVMFPLMIMFLIPVRQYLLPRFFKGAHLQDLDAAEYEEAPALPFNLAAETEIGSTTSYPGDLEILDEVMTRSRGEFRHTSSPKVTSSSSTPVNNR------SLSQVFSPRVSGIRLGQMSPRVVGNS---PKPASCGRSPLNQSSS 703          
BLAST of EY710872 vs. ExPASy Swiss-Prot
Match: BORL1_ARATH (Boron transporter-like protein 1 OS=Arabidopsis thaliana GN=At3g06450 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 1.145e-62
Identity = 132/217 (60.83%), Postives = 153/217 (70.51%), Query Frame = 1
Query:   13 VLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPAI-SYNMTFE---ERAIDI-DGGEILDEMITRSRGEIRHSQSPKITSSTPTSLEDKRSPHSPSMQRA----YSPRVRELRVERSPSLSGKGLEVKKVPSPG 636
            VLWGYFA+MAIE+LPGNQFWERI+LLFTAPSRR+KVLE+NHA FIETVPFK++A FTLFQT YLL+CFGITW+P+AGVLFPL+IM LVPVRQY+LP FFK  HLQDLDAAEYEEAPAI S+N+  E    RA    D GE++D M TRSRGEIR   S K+      S     +     + R      +PRV E    RS S    G E+    S G
Sbjct:  490 VLWGYFAYMAIESLPGNQFWERIVLLFTAPSRRFKVLEDNHAVFIETVPFKTMAMFTLFQTAYLLVCFGITWVPVAGVLFPLMIMFLVPVRQYVLPNFFKGAHLQDLDAAEYEEAPAILSFNLKPEGEVSRATSFADSGEVMDGMFTRSRGEIRKVSSLKLGGGGSGSTVGSPAGGGVELMRRVVSFQNPRVSEKVYIRSLSDFRGGGEISPRSSAG 706          
BLAST of EY710872 vs. ExPASy Swiss-Prot
Match: BORL3_ARATH (Putative boron transporter-like protein 3 OS=Arabidopsis thaliana GN=At1g74810 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.170e-45
Identity = 89/156 (57.05%), Postives = 116/156 (74.36%), Query Frame = 1
Query:   13 VLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPA-------ISYNMTFEERAIDIDGGEILDEMITRSRGEIR 459
            +LWGYFA+MAI++LP NQF+ER +LLF  P+RR+KVLE  HA+F+E VP KSIAAFTLFQ +Y  LC+G+TWIP+AG++FP+L  LLV +RQYLLPK FK  +L++LDAAEYEE P        +S+      R +     EILDE +T SRGE++
Sbjct:  497 LLWGYFAYMAIDSLPDNQFFERTVLLFVPPTRRFKVLEGAHASFVEKVPHKSIAAFTLFQILYFGLCYGVTWIPVAGIMFPVLFFLLVAIRQYLLPKLFKPAYLRELDAAEYEEIPGTPRNPLELSFRSNNSARGVQECDAEILDE-LTTSRGELK 651          
BLAST of EY710872 vs. ExPASy Swiss-Prot
Match: BORL2_ARATH (Boron transporter-like protein 2 OS=Arabidopsis thaliana GN=At1g15460 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.407e-44
Identity = 85/156 (54.49%), Postives = 114/156 (73.08%), Query Frame = 1
Query:   13 VLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEEAPA-------ISYNMTFEERAIDIDGGEILDEMITRSRGEIR 459
            +LWGYFA+MAI++LPGNQF+ER+ LLF   SRR+KVLE  HA+F+E VP+KS+AAFTL Q  Y  LC+G+TWIP+AG++FP+   LL+ +RQY+LPK F   HL++LDAAEYEE P        +S+     +R +     EILDE +T SRGE++
Sbjct:  497 ILWGYFAYMAIDSLPGNQFFERLTLLFVPTSRRFKVLEGAHASFVEKVPYKSMAAFTLLQIFYFGLCYGVTWIPVAGIMFPVPFFLLIAIRQYILPKLFNPAHLRELDAAEYEEIPGTPRNPLELSFRSNDSKRGVQEGDAEILDE-LTTSRGELK 651          
BLAST of EY710872 vs. ExPASy Swiss-Prot
Match: BORL4_ARATH (Putative boron transporter-like protein 4 OS=Arabidopsis thaliana GN=At4g32510 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.456e-41
Identity = 85/168 (50.60%), Postives = 112/168 (66.67%), Query Frame = 1
Query:   13 VLWGYFAFMAIENLPGNQFWERILLLFTAPSRRYKVLEENHATFIETVPFKSIAAFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYLLPKFFKAVHLQDLDAAEYEE---APAISYNMTF---------------EERAIDIDGGEILDEMITRSRGEIRH 462
            VLWGYF +MA+++LPGNQFWER+ LLF  P RR+KVLE  HA+F+E VP+KSI  FTLFQ +Y L+C+G+TWIP+ G+LFPL   +L+ +RQY+L + F   HLQ LD++EYEE   AP  + +  F               E    +    EILDE IT SRGE++H
Sbjct:  525 VLWGYFTYMAVDSLPGNQFWERLQLLFITPGRRFKVLEGLHASFVEIVPYKSIVMFTLFQLLYFLICYGVTWIPVGGILFPLPFFILIALRQYILQRLFDPSHLQVLDSSEYEEMVGAPQRNSSFGFNGELREAHNIPLSVVENSEDEFYDAEILDE-ITTSRGELKH 691          
The following BLAST results are available for this feature:
BLAST of EY710872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
BOR2_ARATH5.296e-7664.71Putative boron transporter 2 OS=Arabidopsis thalia... [more]
BOR1_ARATH1.763e-7163.06Boron transporter 1 OS=Arabidopsis thaliana GN=BOR... [more]
BORL1_ARATH1.145e-6260.83Boron transporter-like protein 1 OS=Arabidopsis th... [more]
BORL3_ARATH2.170e-4557.05Putative boron transporter-like protein 3 OS=Arabi... [more]
BORL2_ARATH1.407e-4454.49Boron transporter-like protein 2 OS=Arabidopsis th... [more]
BORL4_ARATH1.456e-4150.60Putative boron transporter-like protein 4 OS=Arabi... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-B10-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710872 ID=EY710872; Name=EY710872; organism=Citrus sinensis; type=EST; length=929bp
CCACGCGTCCGTGTTCTTTGGGGCTACTTTGCCTTCATGGCCATTGAGAA
CTTGCCTGGAAATCAATTTTGGGAGAGGATATTATTGCTTTTCACTGCTC
CAAGCCGCAGATACAAGGTTTTGGAGGAGAATCATGCAACATTCATTGAG
ACTGTTCCCTTCAAATCAATTGCTGCCTTTACTTTGTTCCAGACAGTCTA
CCTGCTTCTTTGCTTTGGCATAACATGGATTCCCATAGCTGGCGTCCTTT
TCCCACTGTTGATCATGCTTCTTGTCCCTGTGCGGCAATATTTGCTCCCA
AAGTTTTTCAAAGCTGTTCATCTTCAAGATTTGGATGCTGCAGAATATGA
GGAAGCTCCTGCCATTTCTTACAATATGACATTTGAAGAAAGAGCCATCG
ACATTGATGGAGGGGAAATTCTAGATGAAATGATCACACGAAGCCGTGGT
GAGATTCGCCACTCACAGAGTCCTAAAATTACTAGTTCAACTCCAACTTC
ACTTGAGGATAAAAGATCTCCTCACAGTCCATCGATGCAAAGGGCATATA
GTCCCCGTGTTAGAGAACTGAGGGTGGAAAGAAGCCCCAGCTTGAGCGGA
AAAGGGCTAGAAGTAAAGAAAGTTCCCAGTCCCGGGCCATCTAACCTTGG
ACAAAGCAGTAACGGGTCATCTCCATGCTAAAGTCTTGAATGCATAATCC
ACATGAGTTTATTTGTCAATGGTGCTCGAGAGGTCTTGTACTAAGTTCAT
GTTACTACGTGTTAGATGTGCTTCTCTTCCTATTTCTAACCATCGGATGT
CTTCAGTGATTGCTGNTATATTTCAAAATATGGGCAGGTAGAGTTTTATG
TAATAAAAGCATGCTTTATATATCACCAATGAATTTCATTATGTGTGATT
ATAAGGACAGTGAAGATATCTGGGAAACT
back to top