EY710857

Overview
NameEY710857
Unique NameEY710857
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length768
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY710857_ssr43 microsatellite EY710857_ssr43:43..54. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS1_CITUN (Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 3.275e-46
Identity = 107/167 (64.07%), Postives = 115/167 (68.86%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXL-VRKAA*GRAAQRWGNVVL-NVKEPEGSHC*LSEDLSEGKKGTWQGG-SAPGDSLEADFLKY-LW*CNGTWIIQQKEKAFF 549
            MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV   ATRSPQERNT LENMCWRIW     +K   G AAQR     L   +    +   +SEDLSEG+KG      SA GDS  +   +        TWI QQK K  +
Sbjct:    1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLY 167          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_BETVU (Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 6.177e-45
Identity = 104/166 (62.65%), Postives = 113/166 (68.07%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXL-VRKAA*GRAAQRWGNVVLNVKE-PEGSHC*LSEDLSEGKKGTWQGGSAPGDSLEADFLKY-LW*CNGTWIIQQKEKAFF 549
            MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV   ATRSPQERNT LENMCWRIW     +K      AQR     + ++     +   +SEDLSEG+K      SA GDS      +        TWI QQKEK  +
Sbjct:    1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVRAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRKTKRRMELERGRREATADMSEDLSEGEKDI----SAHGDSTRPRLPRINSLDAMETWISQQKEKKLY 162          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_SOLTU (Sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.747e-42
Identity = 89/130 (68.46%), Postives = 96/130 (73.85%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXLVRKAA*GRAAQRWGNVVLNVKEPEGSH----C*LSEDLSEGKKG 438
            MAGNDWINSYLEAILDVGPGLDD KSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW+   ATRSPQ RNT LENMCWRIW    +K        +W  +    +E E         +SEDLSEG+KG
Sbjct:    1 MAGNDWINSYLEAILDVGPGLDDKKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWIRAQATRSPQRRNTRLENMCWRIWNLARQKKQLEGEQAQW--MAKRRQERERGRREAVADMSEDLSEGEKG 128          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS1_CRAPL (Sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.424e-41
Identity = 87/128 (67.97%), Postives = 97/128 (75.78%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXL-VRKAA*GRAAQRWGNVVL-NVKEPEGSHC*LSEDLSEGKKG 438
            MAGNDWINSYLEAILDVGPG+D+AK SLLLRERGRFSPTRYFVEEV++GFDETDLHRSW+   ATRSPQERNT LENMCWRIW     +K      AQR     L   +    +   +SEDLSEG+KG
Sbjct:    1 MAGNDWINSYLEAILDVGPGIDEAKGSLLLRERGRFSPTRYFVEEVVSGFDETDLHRSWIRAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRMAKRRLERERGRREAVADMSEDLSEGEKG 128          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_VICFA (Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.685e-40
Identity = 99/176 (56.25%), Postives = 114/176 (64.77%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXL-VRKAA*GRAAQRWGNVVL-NVKEPEGSHC*LSEDLSEGKKG-------TWQGGSAPGDSL----EADFLKYLW*CNGTWIIQQKEKAFF 549
            MAGNDW+NSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVI GFDETDL+RSWV  S++RSPQERNT LENMCWRIW     +K     A QR     L   +    +   +SEDLSEG++G       T  GG +    L     AD ++       TW+  QK K  +
Sbjct:    1 MAGNDWLNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVI-GFDETDLYRSWVRASSSRSPQERNTRLENMCWRIWNLARQKKQLESEAVQRVNKRRLERERGRREATADMSEDLSEGERGDPVSDVSTHGGGDSVKSRLPRISSADAME-------TWVNSQKGKKLY 168          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_SPIOL (Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.397e-35
Identity = 84/138 (60.87%), Postives = 97/138 (70.29%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVG-PGLD-------DAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXL-VRKAA*GRAAQRWGNVVLNVKEPEG---SHC*LSEDLSEGKKG 438
            MAGNDWINSYLEAILDVG  G+D        A  SLLLRERG FSP+RYFVEEVI+GFDETDLHRSWV  ++TRSPQERNT LEN+CWRIW     +K   G  AQR      +V+   G   +   +SEDLSEG++G
Sbjct:    1 MAGNDWINSYLEAILDVGGQGIDASTGKTSTAPPSLLLRERGHFSPSRYFVEEVISGFDETDLHRSWVRAASTRSPQERNTRLENLCWRIWNLARKKKQIEGEEAQRLAK--RHVERERGRREATADMSEDLSEGERG 136          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS2_CRAPL (Sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.602e-24
Identity = 67/145 (46.21%), Postives = 85/145 (58.62%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGPGLDDAKSS---LLLRERGR-----FSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXLVRKA-------A*GRAAQRWGNVVLNVKEPEGSHC*LSEDLSEGKKGTWQG 450
            MAGN+WIN YLEAILD G    D  S        ++GR     F+PT+YFVEEV++G DE+DLHR+W+   ATR+ +ER++ LENMCWRIW  L RK            AA++W          E     +SEDLSEG+KG   G
Sbjct:    1 MAGNEWINGYLEAILDTGASAIDENSGGGKTAAAQKGRHHDHHFNPTKYFVEEVVSGVDESDLHRTWIKVVATRNTRERSSRLENMCWRIW-HLTRKKKQLEWEDLQRLAARKWEREQGRKDVTED----MSEDLSEGEKGDVMG 140          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_MAIZE (Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.645e-23
Identity = 72/182 (39.56%), Postives = 95/182 (52.20%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDV----------GPGLDDAKSSLLLRERG---RFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXLVRKAA*GRAAQRWGNVVLNVKEPEGSHC------*LSEDLSEGKKGTWQGGSAPGDSLEADFLKYLW*CNGTWIIQQKEKAFF 549
            MAGN+WIN YLEAILD           G G D    +     RG    F+P+ YFVEEV+ G DE+DLHR+W+   ATR+ +ER+T LENMCWRIW  L RK    +  +  G   ++ +  E           L+EDLSEG+KG   G  AP ++ +  F +        W    KEK  +
Sbjct:    1 MAGNEWINGYLEAILDSHTSSRGAGGGGGGGDPRSPTKAASPRGAHMNFNPSHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIW-HLARKK---KQLELEGIQRISARRKEQEQVRREATEDLAEDLSEGEKGDTIGELAPVETTKKKFQRNFSDLT-VWSDDNKEKKLY 177          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_ORYSJ (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. japonica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.265e-20
Identity = 71/199 (35.68%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGP-------------------------GLDDAKSSL-LLRERG---RFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXLVRKAA*GRAAQRWGNVVLNVKEPEGSHC------*LSEDLSEGKKGTWQGGSAPGDS-LEADFLKYLW*CNGTWIIQQKEKAFF 549
            MAGN+WIN YLEAILD G                          G+D    +      RG    F+PT YFVEEV+ G DE+DLHR+W+   ATR+ +ER+T LENMCWRIW  L RK    +  +  G + ++ +  E           L+EDL EG+K    G  A  D+ ++  F +       +W  + KEK  +
Sbjct:    1 MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRGPHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIW-HLARKK---KQLELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSELTVSWSDENKEKKLY 195          
BLAST of EY710857 vs. ExPASy Swiss-Prot
Match: SPS_ORYSI (Probable sucrose-phosphate synthase OS=Oryza sativa subsp. indica GN=SPS1 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 5.265e-20
Identity = 71/199 (35.68%), Postives = 97/199 (48.74%), Query Frame = 1
Query:   61 MAGNDWINSYLEAILDVGP-------------------------GLDDAKSSL-LLRERG---RFSPTRYFVEEVITGFDETDLHRSWVXGSATRSPQERNTXLENMCWRIWTXLVRKAA*GRAAQRWGNVVLNVKEPEGSHC------*LSEDLSEGKKGTWQGGSAPGDS-LEADFLKYLW*CNGTWIIQQKEKAFF 549
            MAGN+WIN YLEAILD G                          G+D    +      RG    F+PT YFVEEV+ G DE+DLHR+W+   ATR+ +ER+T LENMCWRIW  L RK    +  +  G + ++ +  E           L+EDL EG+K    G  A  D+ ++  F +       +W  + KEK  +
Sbjct:    1 MAGNEWINGYLEAILDSGGAAGGGGGGGGGGGGGGGGGGGGGGGGVDPRSPAAGAASPRGPHMNFNPTHYFVEEVVKGVDESDLHRTWIKVVATRNARERSTRLENMCWRIW-HLARKK---KQLELEGILRISARRKEQEQVRRETSEDLAEDLFEGEKADTVGELAQQDTPMKKKFQRNFSELTVSWSDENKEKKLY 195          
The following BLAST results are available for this feature:
BLAST of EY710857 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
SPS1_CITUN3.275e-4664.07Sucrose-phosphate synthase 1 OS=Citrus unshiu GN=S... [more]
SPS_BETVU6.177e-4562.65Sucrose-phosphate synthase OS=Beta vulgaris GN=SPS... [more]
SPS_SOLTU3.747e-4268.46Sucrose-phosphate synthase OS=Solanum tuberosum GN... [more]
SPS1_CRAPL1.424e-4167.97Sucrose-phosphate synthase 1 OS=Craterostigma plan... [more]
SPS_VICFA2.685e-4056.25Sucrose-phosphate synthase OS=Vicia faba GN=SPS PE... [more]
SPS_SPIOL3.397e-3560.87Sucrose-phosphate synthase OS=Spinacia oleracea GN... [more]
SPS2_CRAPL4.602e-2446.21Sucrose-phosphate synthase 2 OS=Craterostigma plan... [more]
SPS_MAIZE6.645e-2339.56Sucrose-phosphate synthase OS=Zea mays GN=SPS PE=1... [more]
SPS_ORYSJ5.265e-2035.68Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
SPS_ORYSI5.265e-2035.68Probable sucrose-phosphate synthase OS=Oryza sativ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-702-001-A06-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY710857 ID=EY710857; Name=EY710857; organism=Citrus sinensis; type=EST; length=768bp
CCACGCGTCCGATATATTTGGTTCTAGAATCAACTTCTCAACAAGAAGAA
GAAGAGGAGGATGGCAGGAAACGATTGGATAAACAGTTATCTCGAAGCAA
TACTTGATGTGGGCCCCGGTCTCGACGACGCTAAATCCTCGTTGCTCTTG
CGAGAGAGAGGGAGGTTCAGTCCGACGAGGTACTTCGTCGAGGAAGTCAT
CACCGGATTCGATGAGACCGATCTCCACCGTTCCTGGGTTAANGGCTCAG
CGACGAGGAGTCCGCAAGAGAGGAATACGNCGCTGGAGAATATGTGTTGG
AGGATTTGGACTTNGCTCGTCAGAAAAGCAGCTTGAGGGAGAGCAGCTCA
GAGATGGGGAAACGTCGTCTTGAACGTGAAAGAGCCGGAGGGGAGCCACT
GCTGATTGTCTGAAGACTTGTCTGAGGGAAAAAAGGGGACATGGCAGGGA
GGATCGGCTCCTGGGGATAGTCTAGAAGCCGACTTCCTAAAATACCTCTG
GTGATGCAATGGAACCTGGATTATCCAACAAAAGGAAAAAGCTTTTTTTG
GGCTATAAGATTCAGGGGCCCACCAGGGGAAATATGGAGTTGGGGCGGAT
TTTATACCGGGGGCCGGTAAAATTTTTGGAACTTTAAAACCTTGGGCCCT
TCCGGATTTTTCGATGGTTTTGCCCTAAAAAATTTGCCCCCAATTTAATT
GGGGTTTGGGACCCCAAAATGGTCCCCCCCCACCCCAATTTTCCTGGCAA
TTGGGGGAAAACGGGGTT
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