EY679617

Overview
NameEY679617
Unique NameEY679617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length956
Libraries
Library NameType
Sweet orange leaf, young greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY679617 vs. ExPASy Swiss-Prot
Match: MTPC3_ARATH (Putative metal tolerance protein C3 OS=Arabidopsis thaliana GN=MTPC3 PE=3 SV=2)

HSP 1 Score: 239.195 bits (609), Expect = 2.671e-62
Identity = 114/158 (72.15%), Postives = 132/158 (83.54%), Query Frame = 1 
Query:    7 VRAYAKDHYFDXXXXXXXXXXXXXXDSFYWWIDPAGAILLAVYTITNWSETVMENAVSLVGQSAPPEILQKLTYLVIRH--PEVKRIDTVRAYTFGVLYFVEVDIELPEELPLKEAHAIGESLQNKIEKLPEVERAFVHLDYECDHKPEHTVLNKLPS 474
            VRAYAKDH+FD              ++FYWW+DP GAILLA+YTI NWS TVMENAVSL+GQSAPPE+LQKLTYLV+R     +K +DTVRAYTFGVLYFVEVDIELPE+LPLKEAHAIGESLQ K+E+LPEVERAFVHLD+EC HKPEH+VL+ +P+
Sbjct:  252 VRAYAKDHHFDVVTNVLGLVAAVLANAFYWWLDPTGAILLAIYTIVNWSGTVMENAVSLIGQSAPPEVLQKLTYLVMRQGGDNIKHVDTVRAYTFGVLYFVEVDIELPEDLPLKEAHAIGESLQIKLEELPEVERAFVHLDFECHHKPEHSVLSTIPN 409
The following BLAST results are available for this feature:
BLAST of EY679617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MTPC3_ARATH2.671e-6272.15Putative metal tolerance protein C3 OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-650-002-B09-CT.F Sweet orange leaf, young greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY679617 ID=EY679617; Name=EY679617; organism=Citrus sinensis; type=EST; length=956bp
CCACGCGTCCGCGCATATGCTAAGGATCACTATTTTGATGTGGTAACAAA
TGTAGTAGGATTAGTTGCTGCTGTTCTTGGTGATAGTTTCTATTGGTGGA
TTGATCCTGCAGGTGCCATTCTTCTGGCAGTTTACACAATTACAAATTGG
TCCGAAACTGTTATGGAAAATGCAGTTTCACTTGTGGGACAATCGGCTCC
TCCTGAAATCTTGCAGAAATTGACATATCTTGTCATAAGGCACCCTGAAG
TCAAGCGTATCGACACAGTTCGAGCTTACACTTTCGGCGTTCTTTATTTT
GTAGAGGTTGACATTGAGCTACCAGAAGAGTTACCGTTAAAAGAAGCACA
TGCAATAGGAGAGAGCTTGCAGAACAAGATTGAGAAACTCCCTGAAGTTG
AACGAGCATTTGTTCATCTTGACTATGAATGCGATCATAAGCCAGAGCAC
ACAGTTCTCAACAAGCTGCCCAGCAGTCAGCCCTGATTTTTGGCTACCCA
TTGCAAGCTTTCACTCAAGTTCCACGAGTATTTTCTTTCTTCCATCGCTT
AAGTTGTTTGTATTGAGAAACAATCCAATTTTGTTGTTGAAAAGATGTGC
TGGTGAAGCATTTATGTTCCTGTTGAGTGAATCAGGTACATGACGAAGAG
AAATGGCACAACGTATGTTGTAAATCAAAAGCTTCCCAGCATATACAAAA
ATTACTTGGGGTATATATATTGATTTAATCCCCTTGAAATACCAAATGAA
AATGAAAACATAAGTTGGCTGGTTCCCNNAGGAACAAAGTAAGAGAAAGA
AAAAAAAAAAAAAAATCACAACAAGAGAAAAAAGAAATGAGAAAAAGAGA
CAACCGGCCCCCCGATCATAACAACAAAAAGGGAAGACGGCCGCACGGGG
ACAGTCTACTAGCAACCTCATTCCGGTGCGCAGCCGAAACAGACATCCCC
CCCAGT
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