EY679606
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 353.984 bits (907), Expect = 7.441e-97 Identity = 181/216 (83.80%), Postives = 188/216 (87.04%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLL 637 INPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNVADDDIVKLVDTFPGQSIDFFGALRARVY DEVR+ W + + K P EQP+MT++KLL Sbjct: 184 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRK-----WVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLL 394
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 350.132 bits (897), Expect = 1.074e-95 Identity = 176/217 (81.11%), Postives = 188/217 (86.64%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKE+NPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTR+DR+GVCKGIFR DNV D+DIVK+VD+FPGQSIDFFGALRARVYDDEVR+ W E + P EQP+MT+EKL+E Sbjct: 175 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRK-----WVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLME 386
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 3.126e-95 Identity = 177/217 (81.57%), Postives = 188/217 (86.64%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++DIVK+VD FPGQSIDFFGALRARVYDDEVR+ W + + K P EQP+MT++KLL+ Sbjct: 184 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRK-----WVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQ 395
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 6.964e-95 Identity = 178/213 (83.57%), Postives = 187/213 (87.79%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELKGNTPQHSEQPRMTLEKLLE 640 I+PIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMC L INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVC GIFR+DNVA +DIVKLVDTFPGQSIDFFGALRARVYDDEVR+ ++ K P EQP+MT+EKLLE Sbjct: 184 ISPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTF-EQPKMTIEKLLE 395
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA_CUCSA (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 346.665 bits (888), Expect = 1.188e-94 Identity = 174/213 (81.69%), Postives = 187/213 (87.79%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELKGNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGNAGEPAKLIRQRYREAADII+KGKMCCL INDLDAGAGR+GGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRM+KFYWAPTREDRIG+C GIFR D V +DIVKLVDTFPGQSIDFFGALRARVYDDEVR+ + + + K +P +QP+MT+EKLLE Sbjct: 181 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSK-ESPPTFDQPKMTIEKLLE 392
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.313e-93 Identity = 173/217 (79.72%), Postives = 187/217 (86.18%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNK ENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+ DNV+D+ +VK+VDTFPGQSIDFFGALRARVYDDEVR+ W E + + P EQP+MT+EKLLE Sbjct: 174 INPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRK-----WVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLE 385
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA_SOLPN (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Solanum pennellii PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 2.926e-93 Identity = 176/217 (81.11%), Postives = 186/217 (85.71%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG MCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ +VK+VD+FPGQSIDFFGALRARVYDDEVR+ W E K + P EQP+MTLEKLLE Sbjct: 183 INPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRK-----WVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLE 394
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 342.043 bits (876), Expect = 2.926e-93 Identity = 185/279 (66.31%), Postives = 206/279 (73.84%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELKGNTPQHSEQPRMTLEKLLELRKHDLCRTKKM*KKFIWVTVI*VGPLLVKQCRFLSKWEIFFGKPPPQMNFPISLKGVPVPHAKKF 838 INPIMMSAGELESGNAGEPAKLIRQRYREAAD+I+KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNKEEN RVPII TGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR D + D+DIV LVD FPGQSIDFFGALRARVYDDEVR+ K + + P EQP MT EKL+E + + + + + T + L + + F+GK Q+N P+ +G P A+ F Sbjct: 184 INPIMMSAGELESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVF-EQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGR-GTFYGKGAQQVNLPVP-EGCTDPVAENF 459
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCA2_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Nicotiana tabacum GN=RCA PE=2 SV=1) HSP 1 Score: 340.502 bits (872), Expect = 8.513e-93 Identity = 174/217 (80.18%), Postives = 186/217 (85.71%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGNAGEPAKLIRQRYREAA+IIRKG +CCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPT VQLPGMYNK+EN RVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV ++ ++K+VDTFPGQSIDFFGALRARVYDDEVR+ W E K + P EQP+MT+EKLLE Sbjct: 188 INPIMMSAGELESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRK-----WVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLE 399
BLAST of EY679606 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 340.117 bits (871), Expect = 1.112e-92 Identity = 175/217 (80.65%), Postives = 185/217 (85.25%), Query Frame = 2 Query: 2 INPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLMINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTCVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRNDNVADDDIVKLVDTFPGQSIDFFGALRARVYDDEVRELDLWYWCWKHWQEPCELK----GNTPQHSEQPRMTLEKLLE 640 INPIMMSAGELESGN GEPAKLIRQRYREAADII KGKMCCL INDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PT VQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR DNV D+ +V+LVDTFPGQSIDFFGALRARVYDDEVR+ W + E + P +QP+MT+EKL+E Sbjct: 172 INPIMMSAGELESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRK-----WVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLME 382 The following BLAST results are available for this feature:
BLAST of EY679606 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY679606 ID=EY679606; Name=EY679606; organism=Citrus sinensis; type=EST; length=957bpback to top |