EY744204

Overview
NameEY744204
Unique NameEY744204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange flower, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY744204 vs. ExPASy Swiss-Prot
Match: APL_ARATH (Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL PE=2 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.478e-21
Identity = 49/70 (70.00%), Postives = 56/70 (80.00%), Query Frame = 1 
Query:  499 KQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDVDKKE 708
            K RLRWT ELHERFVDAVAQLGGPD+ATPK ++RVMGV+GLT+YH+KSHLQK+RL K       D   KE
Sbjct:   34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEYGDHSTKE 103
[Close]
BLAST of EY744204 vs. ExPASy Swiss-Prot
Match: MYBF_ARATH (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana GN=At1g14600 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.587e-12
Identity = 36/52 (69.23%), Postives = 40/52 (76.92%), Query Frame = 1 
Query:  505 RLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYR 660
            RLRWT ELH  FV AV  LGG  +ATPK VL++M V+GLTI HVKSHLQ YR
Sbjct:   25 RLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYR 76
The following BLAST results are available for this feature:
BLAST of EY744204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
APL_ARATH2.478e-2170.00Myb family transcription factor APL OS=Arabidopsis... [more]
MYBF_ARATH3.587e-1269.23Putative Myb family transcription factor At1g14600... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C5-003-001-A09-CT.F Sweet orange flower, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY744204 ID=EY744204; Name=EY744204; organism=Citrus sinensis; type=EST; length=847bp
ACTTTTGTTGCATTACGCAGGTTATGTTGGATTACAGCCATGATTGGCTG
ATTGTAGTATATGATCAAAACCTAATATCAGGAGTGTCTAGGTCAGATAA
TGAGTTTACATCATGAATTAGACTGGATGCTGAGTTGGAATTGTCAAGTT
TTGCTGCTATTGAAGAAATGATCTGTGGCATCTCTTGAGCTATAATAAAG
TTTTACCCCTTTTTCACCAACCCAAAATGTTATCTAAGGAAGTACTATGG
CTTTTCTAATTTGATATTGTTGTTAAGGATGAAAACTGTAAAATACATTT
TCTTGTTTATGTTCTTGATGAGTTTCTGCTTTCTTGTATGTAGATGAATG
ACAGATGTATCAACCAAATAGTGTTCCAAGTTCAAGTTTAGTCCGCAGCA
ACTCATTAGTTCATGGTCAGCATTTAGATTGTGGTTCTAGTCAGATGGAC
CCTATGAATGGAGGGAACAGTCTCAACAACAACCCTAGTCTTGCTTCAAA
GCAAAGATTGCGTTGGACGCATGAACTTCATGAACGCTTTGTTGATGCTG
TAGCACAGCTTGGTGGGCCAGATCGGGCTACTCCTAAAGGTGTGCTTAGA
GTCATGGGTGTGCAAGGTTTAACAATATACCATGTCAAGAGCCATTTACA
GAAATATCGACTTGCAAAATACCTCCCTGACTCCTCCTCGGATGTTGACA
AGAAAGAAACTGGGGAAATGCTTTCCAGCTGGAATGGGTCATCTGGGAAT
GCAATTACTGGAACCCCTAAAGCTTCAAAAGGGAGGTGGAAAAACAAAAT
GGCTGGACCAACTGGGAGGGGCCAAAACCCCTTTCCATTTACGGAAT
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