EY659976

Overview
NameEY659976
Unique NameEY659976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length750
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2159 contig Csv1_Contig2159:73..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659976 vs. ExPASy Swiss-Prot
Match: Y2179_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0282179 OS=Dictyostelium discoideum GN=DDB_G0282179 PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 43/138 (31.16%), Postives = 74/138 (53.62%), Query Frame = 1
Query:   46 LMLFACFLLLVSSSHAIGVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYF------GVPVHQETRDVCEEVSCPIAAGDFVLSHTQTLPSFTPPGSYTLKMTMEDKNNEELTCFSF 441
            L+L   F+L++  +  I   YCD   N    I ++ ++PDP + GK  T ++     + +  G  + NVA+F       +P      D+C+ +SCP++AG F  S +  +P FTP G Y  ++T+ D++N  +TC +F
Sbjct:    6 LLLLINFMLILIVNGDIW-NYCDGNINPTFKINKLTLLPDPPLVGKEVTISLEGSLNEQITSGSSIFNVAFFINGGWRQLPTFHN--DICKVLSCPVSAGPFTYSTSIKVPIFTPHGQYKGQLTLTDQSNRNVTCLTF 140          
BLAST of EY659976 vs. ExPASy Swiss-Prot
Match: Y8295_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0278295 OS=Dictyostelium discoideum GN=DDB_G0278295 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.279e-11
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 1
Query:  139 IQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVC---EEVSCPIAAGDFVLSHTQTLPSFTPPGSYTLKMTMEDKNNEELTCFSFNFKI 453
            I  V + P   V G+  T + S +  + V GG V + V Y  + +  E   +C   + ++CPIAAGD+  + T+ +PS  P G YT  + + D+NN E+ C   +  +
Sbjct:   34 ITNVVLDPPTPVKGQDITISASGILDETVTGGNVAVKVKYGFITLINENVSICSSQDPLACPIAAGDYQKNMTEMIPSDAPSGKYTGNVVITDQNNAEIACIDVDINL 141          
BLAST of EY659976 vs. ExPASy Swiss-Prot
Match: NPC22_DICDI (Putative phosphatidylglycerol/phosphatidylinositol transfer protein 2 OS=Dictyostelium discoideum GN=DDB_G0282109 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11
Identity = 39/131 (29.77%), Postives = 66/131 (50.38%), Query Frame = 1
Query:   52 LFACFLLLVSSSHAIGVKYCDKKKNYAVTIQQVKIIPDPVVTGKPATFNISAVTGQAVYGGKVVINVAYFGVPVHQETRDVC----EEVSCPIAAGDFVLSHTQTLPSFTPPGSYTLKMTMEDKNNEELTC 432
            L+   LL++ +S + G  + +   N    I  V I+PDP V GK  T + S V G+ +  G+V I V +  + +  E +D+C        CPI  G++  +   T+P   P G YT  +++ D+ + E+ C
Sbjct:    5 LYLSILLILLTSTSFGDIWSNCGPNEKFKITSVSIVPDPPVKGKLITISGSGVLGENLTSGQVAILVKFGLITLINEKKDICTLPGSPYKCPIKEGEYSHTINFTIPEAAPNGKYTGHVSVTDQESSEIAC 135          
The following BLAST results are available for this feature:
BLAST of EY659976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
Y2179_DICDI2.864e-1531.16Putative phosphatidylglycerol/phosphatidylinositol... [more]
Y8295_DICDI4.279e-1131.48Putative phosphatidylglycerol/phosphatidylinositol... [more]
NPC22_DICDI7.299e-1129.77Putative phosphatidylglycerol/phosphatidylinositol... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-017-B07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659976 ID=EY659976; Name=EY659976; organism=Citrus sinensis; type=EST; length=750bp
TTCAAACACGGACGCGTCCGCTTCGCTTTACCATAGAACCGTCAGTTGAT
GCTGTTCGCTTGTTTTCTTCTTCTAGTTTCTTCCTCTCACGCCATAGGTG
TCAAATACTGCGATAAGAAGAAAAACTACGCTGTAACGATTCAGCAAGTT
AAGATAATTCCTGATCCCGTAGTCACAGGCAAGCCAGCCACCTTTAACAT
CTCAGCTGTTACAGGTCAAGCTGTCTATGGTGGGAAAGTGGTGATAAATG
TTGCTTACTTTGGGGTACCTGTCCATCAAGAAACCCGTGACGTTTGTGAG
GAGGTATCGTGTCCCATTGCAGCAGGAGACTTTGTACTGTCCCACACCCA
GACTCTGCCTAGTTTCACTCCTCCGGGCTCCTACACACTTAAGATGACAA
TGGAGGACAAGAACAATGAAGAACTGACTTGCTTTAGCTTCAACTTCAAA
ATTGGCTTTCATTCTCTGGTCTCTGATAGTTAAAAGTGCCCGGTACCGTA
TTATGATCTCTTGCGTTTCGAATGGTCAAGTTCATCCTTAACACCAACCC
AATGTAAACAAGTGTGCGCTCTATGTGGCTGCTTGTATATTATTTTAGTT
CTGTGTTCGATGGTGTTTGATGTTGTAATATTCTTGTAAGATTCGTATCT
GTAATCTGTGTTCTGTCTGTGTGTTGAATTTCTTCTCAAGGGTAAAGACG
TCAATGGACTTGATTCGCGAATGGTGACTATTGCTCTTGTGATCCCTGAA
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