EY659951

Overview
NameEY659951
Unique NameEY659951
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7068 contig Csv1_Contig7068:93..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.453e-17
Identity = 50/112 (44.64%), Postives = 73/112 (65.18%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNYDC-NICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +++L  LC+ ++PV++ + SYIV EG  +D+M+F+++G LLT  + G      N++     + CGEEL+ WA D       SSS LPIST T++AL +VEAF L ADDLK V
Sbjct:  492 EQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNSEYLGAGDFCGEELLTWALD-----PHSSSNLPISTRTVRALMEVEAFALKADDLKFV 598          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.590e-16
Identity = 46/112 (41.07%), Postives = 74/112 (66.07%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNYDCN-ICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +++L  +C+ ++PV++ +NSY++ EG  + +M+FV++G L++  + G  +   N  N   +  CGE+L+ WA D       SSS  PIST T+QALT+VEAF L A+DLK+V
Sbjct:  479 EQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVNLKASDFCGEDLLPWALDP-----QSSSHFPISTRTVQALTEVEAFALTAEDLKSV 585          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 7.890e-16
Identity = 47/112 (41.96%), Postives = 71/112 (63.39%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNY-DCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +++L  +C+ +KPV++ +NSY + EG  +++M+FV++G L++  + G      N       + CGE+L+ WA D       SSS  PIST T+QALT+VEAF L ADDLK V
Sbjct:  480 EQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNAVYLKPSDFCGEDLLTWALD-----PQSSSHFPISTRTVQALTEVEAFALAADDLKLV 586          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.916e-15
Identity = 45/112 (40.18%), Postives = 72/112 (64.29%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNY-DCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +R+L  +CE +KP +F + SY+V EG  +++M+F+++G L +  ++G  +   N     + + CG+EL+ WA D       S S LP ST T++ALT+VEAF L+AD+LK V
Sbjct:  520 ERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALD-----PKSGSNLPSSTRTVKALTEVEAFALIADELKFV 626          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.139e-14
Identity = 45/112 (40.18%), Postives = 72/112 (64.29%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNY-DCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +R+L  +CE +KP ++ ++SY+V EG  +++M+F+++G L +  ++G  +   N     + + CGEEL+ WA D       S S LP ST T +ALT+VEAF L+AD+LK V
Sbjct:  519 ERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGDFCGEELLTWALD-----PKSGSNLPSSTRTAKALTEVEAFALIADELKFV 625          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.654e-14
Identity = 44/112 (39.29%), Postives = 72/112 (64.29%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNY-DCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +R+L  +CE +KP +F +++YIV EG  +++M+F+++G L +  ++G  +   N     + + CGEEL+ WA D       + S LP ST T++ALT+VEAF L A++LK V
Sbjct:  508 ERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALD-----PKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 614          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.260e-13
Identity = 43/112 (38.39%), Postives = 72/112 (64.29%), Query Frame = 1
Query:   73 KRVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNY-DCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            +R+L  +CE +KP ++ +++YIV EG  +++M+F+++G L +  ++G  +   N     + + CGEEL+ WA D       + S LP ST T++ALT+VEAF L A++LK V
Sbjct:  514 ERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALD-----PKAGSNLPSSTRTVKALTEVEAFALEAEELKFV 620          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC3_ARATH (Probable cyclic nucleotide-gated ion channel 3 OS=Arabidopsis thaliana GN=CNGC3 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.787e-13
Identity = 47/111 (42.34%), Postives = 67/111 (60.36%), Query Frame = 1
Query:   76 RVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLL-TYNSEGITAAPPNTDNYDCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            R+L  LC  +K V++ + SYIV EG  ++ M+F+++GNL+ T    G T    + D    + CG +L+ WA       D  SS  PIS+ T+QALT+VE F+L ADDLK V
Sbjct:  484 RLLDALCARLKTVLYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLVAGDFCG-DLLTWA------LDPLSSQFPISSRTVQALTEVEGFLLSADDLKFV 587          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.393e-12
Identity = 41/111 (36.94%), Postives = 68/111 (61.26%), Query Frame = 1
Query:   76 RVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLLTYNSEGITAAPPNTDNY-DCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            ++L  +C  +KP +F +++Y+V EG  +D+M+F+++G L +  ++G  +   N     +   CGEEL+ WA D       S   LP ST T++ALT+VEAF L +++LK V
Sbjct:  505 KLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRSLLKEGEFCGEELLTWALD-----PKSGVNLPSSTRTVKALTEVEAFALTSEELKFV 610          
BLAST of EY659951 vs. ExPASy Swiss-Prot
Match: CNG11_ARATH (Cyclic nucleotide-gated ion channel 11 OS=Arabidopsis thaliana GN=CNGC11 PE=2 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.627e-11
Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 1
Query:   76 RVLXDLCEFVKPVVFMDNSYIVPEGGSIDKMVFVVQGNLL-TYNSEGITAAPPNTDNYDCNICGEELVAWAQDACTRTDSSSSALPISTITIQALTKVEAFILMADDLKNV 405
            ++L  LC  +K V + + SYIV EG  ++ M+F+++GNL+ T    G T    + D    + CG+ L+ WA        S SS  PIS+ T+QALT+VE F++ ADDLK V
Sbjct:  442 QLLDALCARLKTVHYTEKSYIVREGEPVEDMLFIMRGNLISTTTYGGRTGFFNSVDLIAGDSCGD-LLTWA------LYSLSSQFPISSRTVQALTEVEGFVISADDLKFV 545          
The following BLAST results are available for this feature:
BLAST of EY659951 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
CNGC1_ARATH2.453e-1744.64Cyclic nucleotide-gated ion channel 1 OS=Arabidops... [more]
CNG10_ARATH1.590e-1641.07Probable cyclic nucleotide-gated ion channel 10 OS... [more]
CNG13_ARATH7.890e-1641.96Putative cyclic nucleotide-gated ion channel 13 OS... [more]
CNGC6_ARATH3.916e-1540.18Probable cyclic nucleotide-gated ion channel 6 OS=... [more]
CNGC9_ARATH1.139e-1440.18Putative cyclic nucleotide-gated ion channel 9 OS=... [more]
CNGC7_ARATH5.654e-1439.29Putative cyclic nucleotide-gated ion channel 7 OS=... [more]
CNGC8_ARATH1.260e-1338.39Putative cyclic nucleotide-gated ion channel 8 OS=... [more]
CNGC3_ARATH4.787e-1342.34Probable cyclic nucleotide-gated ion channel 3 OS=... [more]
CNGC5_ARATH1.393e-1236.94Probable cyclic nucleotide-gated ion channel 5 OS=... [more]
CNG11_ARATH2.627e-1140.54Cyclic nucleotide-gated ion channel 11 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-H06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659951 ID=EY659951; Name=EY659951; organism=Citrus sinensis; type=EST; length=775bp
TTNNNNNNNNTATGGTAGCCTGCAGTACGGTCCGGAATTTTTCATATGGG
GGNGNNNGGNTTGGTTTCCTAAAAAAGGGTATTGGANGATCTGTGTGAAT
TTGTAAAACCAGTTGTCTTTATGGACAACTCTTATATTGTCCCCGAGGGA
GGCTCAATTGATAAGATGGTCTTCGTGGTGCAAGGCAACCTACTGACTTA
CAACTCCGAGGGCATAACAGCTGCCCCTCCAAACACTGATAATTATGATT
GCAACATTTGTGGGGAAGAACTTGTTGCTTGGGCTCAGGACGCTTGCACT
AGAACTGACTCTTCTTCATCTGCCCTCCCCATCTCAACCATCACTATTCA
AGCTCTCACAAAAGTTGAAGCATTTATTCTTATGGCTGATGACTTGAAAA
ATGTATTACTCATCAAGCACAATCGGGCAGCTCCATTTATTCAAGCAGCT
CGATTCATTACAATAGTCATGGGTGCTATAAAAGGAACTTTCTTGCCTTC
CACAAGGACTGCAGAAACATCAACACAGGAGCAAGTACCTCCAACAATAA
GGTCTAAGCAGCTGGTGGAAACTCAGATTATTGCAAAAGAGAAATAGGCG
GCTCACTCTTTTTTTGGGTCGCATGATGAGCTCACAGCTATTGTTTATCT
TTTAATTGCAAATTACATCTTGTTTCCAGGTTATTGCATAAATCTCCTAA
AAGTAATTTGTATACTGTACATTTATTTGGAAATTTAGAGAACTACTGAC
GGCTTAAAAAAAAAAAAAAAAAAAA
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