EY659937

Overview
NameEY659937
Unique NameEY659937
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length917
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7204 contig Csv1_Contig7204:1..921. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_RAT (Phosphatidylcholine-sterol acyltransferase OS=Rattus norvegicus GN=Lcat PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.347e-22
Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = 2
Query:   86 SRGLHPLILVPGNGGNQLEARLTSDYKPSSL--LCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPV 613
            S    P+ILVPG  GN+LEA+L    KP+ +  LC R       +E +F +W D ++ LP    C+ D   + Y+       N+PGV+ RVP FG T S+ YLD N    ++ GY+ +LV++L   GYV  ET+  APYD+R          R   ++ Q L  L+E+   +  GKPV
Sbjct:   43 SNHTRPVILVPGCMGNRLEAKLD---KPNVVNWLCYR------KTEDFFTIWLDFNMFLPLGVDCWIDNTRVVYNRSSGHMSNAPGVQIRVPGFGKTYSVEYLDDN----KLAGYLNTLVQNLVNNGYVRDETVRAAPYDWRLA-------PRQQDEYYQKLAGLVEEMYAAY-GKPV 199          

HSP 2 Score: 30.0314 bits (66), Expect = 2.347e-22
Identity = 12/31 (38.71%), Postives = 18/31 (58.06%), Query Frame = 1
Query:  667 EPFXLAQEFIKHFVALSAPWGGTVERMLTFA 759
            +P      FI  F++L APWGG+++ M   A
Sbjct:  218 QPQSWKDHFIDGFISLGAPWGGSIKPMRILA 248          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_RABIT (Phosphatidylcholine-sterol acyltransferase OS=Oryctolagus cuniculus GN=LCAT PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 3.973e-22
Identity = 67/176 (38.07%), Postives = 95/176 (53.98%), Query Frame = 2
Query:   86 SRGLHPLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPV 613
            S    P+ILVPG  GNQLEA+L    KPS +    W    + +E +F +W D ++ LP    C+ D   + Y+        SPGV+ RVP FG T S+ YLD N    ++ GYM +LV++L   GYV  ET+  APYD+R        PS+   ++   L  L+E+  ++  GKPV
Sbjct:   43 SNHTRPVILVPGCLGNQLEAKLD---KPSVV---NWM-CYRKTEDFFTIWLDLNMFLPLGVDCWIDNTRVVYNRSSGRVVISPGVQIRVPGFGKTYSVEYLDNN----KLAGYMHTLVQNLVNNGYVRDETVRAAPYDWRL------EPSQ-QEEYYGKLAGLVEE-MHAAYGKPV 199          

HSP 2 Score: 32.7278 bits (73), Expect = 3.973e-22
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  667 EPFXLAQEFIKHFVALSAPWGGTVERMLTFA 759
            +P      FI  F++L APWGG+++ ML  A
Sbjct:  218 QPQSWKDRFIDGFISLGAPWGGSIKPMLVLA 248          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: PAG15_HUMAN (Group XV phospholipase A2 OS=Homo sapiens GN=PLA2G15 PE=1 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 1.140e-21
Identity = 64/172 (37.21%), Postives = 92/172 (53.49%), Query Frame = 2
Query:  101 PLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPVI 616
            P++LVPG+ GNQLEA+L    KP+ +     Y   K +E +F +W +  +LLP    C+ D + L Y+          GV+ RVP FG T SL +LDP+     +  Y  ++VESL   GY  GE + GAPYD+R        P+  G  FL  L+++IE+     GG  V+
Sbjct:   39 PVVLVPGDLGNQLEAKLD---KPTVV----HYLCSKKTESYFTIWLNLELLLPVIIDCWIDNIRLVYNKTSRATQFPDGVDVRVPGFGKTFSLEFLDPS--KSSVGSYFHTMVESLVGWGYTRGEDVRGAPYDWRRA------PNENGPYFLA-LREMIEEMYQLYGGPVVL 194          

HSP 2 Score: 28.8758 bits (63), Expect = 1.140e-21
Identity = 11/31 (35.48%), Postives = 18/31 (58.06%), Query Frame = 1
Query:  667 EPFXLAQEFIKHFVALSAPWGGTVERMLTFA 759
            +P     ++I+ FV+L APWGG  + +   A
Sbjct:  211 QPQAWKDKYIRAFVSLGAPWGGVAKTLRVLA 241          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_HUMAN (Phosphatidylcholine-sterol acyltransferase OS=Homo sapiens GN=LCAT PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.481e-21
Identity = 64/176 (36.36%), Postives = 95/176 (53.98%), Query Frame = 2
Query:   86 SRGLHPLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPV 613
            S    P+ILVPG  GNQLEA+L    KP  +    W    + +E +F +W D ++ LP    C+ D   + Y+       N+PGV+ RVP FG T S+ YLD +    ++ GY+ +LV++L   GYV  ET+  APYD+R  L  G        ++ + L  L+E+  ++  GKPV
Sbjct:   43 SNHTRPVILVPGCLGNQLEAKLD---KPDVV---NWM-CYRKTEDFFTIWLDLNMFLPLGVDCWIDNTRVVYNRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSS----KLAGYLHTLVQNLVNNGYVRDETVRAAPYDWR--LEPGQQ-----EEYYRKLAGLVEE-MHAAYGKPV 199          

HSP 2 Score: 32.7278 bits (73), Expect = 1.481e-21
Identity = 13/31 (41.94%), Postives = 19/31 (61.29%), Query Frame = 1
Query:  667 EPFXLAQEFIKHFVALSAPWGGTVERMLTFA 759
            +P      FI  F++L APWGG+++ ML  A
Sbjct:  218 QPQAWKDRFIDGFISLGAPWGGSIKPMLVLA 248          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: PAG15_MOUSE (Group XV phospholipase A2 OS=Mus musculus GN=Pla2g15 PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.509e-21
Identity = 63/172 (36.63%), Postives = 92/172 (53.49%), Query Frame = 2
Query:  101 PLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPVI 616
            P++LVPG+ GNQLEA+L    K    LC+      K ++ +F LW +  +LLP    C+ D + L Y+          GV+ RVP FG T S+ +LDP+   + +  Y  ++VESL   GY  GE + GAPYD+R        P+  G  FL  L+++IE+     GG  V+
Sbjct:   39 PVVLVPGDLGNQLEAKLDKP-KVVHYLCS------KKTDSYFTLWLNLELLLPVIIDCWIDNIRLVYNRTSRATQFPDGVDVRVPGFGETFSMEFLDPSK--RNVGSYFYTMVESLVGWGYTRGEDVRGAPYDWRRA------PNENGPYFLA-LREMIEEMYQMYGGPVVL 194          

HSP 2 Score: 27.7202 bits (60), Expect = 2.509e-21
Identity = 11/31 (35.48%), Postives = 17/31 (54.84%), Query Frame = 1
Query:  667 EPFXLAQEFIKHFVALSAPWGGTVERMLTFA 759
            +P     ++I  FV+L APWGG  + +   A
Sbjct:  211 QPQVWKDKYIHAFVSLGAPWGGVAKTLRVLA 241          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_CHICK (Phosphatidylcholine-sterol acyltransferase (Fragment) OS=Gallus gallus GN=LCAT PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 9.956e-20
Identity = 58/161 (36.02%), Postives = 86/161 (53.42%), Query Frame = 2
Query:  101 PLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEK 583
            P  LVPG  GNQLEA+L    KP  +    W    + +E +F +W + +  LP    C+ D   + Y+       N+PGV  RVP FG T S+ YLD +    ++ GY+ +LV++L   GYV  +T+  APYD+R G        +   ++ Q+LK LIE+
Sbjct:   46 PWCLVPGFLGNQLEAKLD---KPDVV---NWM-CYRKTEDYFTIWLNLNTFLPVGVDCWIDNTRVVYNRTARKMTNAPGVHIRVPGFGKTYSVEYLDQS----KLAGYLHTLVQNLVNNGYVRDQTVRAAPYDWRVG-------PQEQPEYFQNLKALIEE 188          

HSP 2 Score: 28.1054 bits (61), Expect = 9.956e-20
Identity = 10/24 (41.67%), Postives = 17/24 (70.83%), Query Frame = 1
Query:  688 EFIKHFVALSAPWGGTVERMLTFA 759
            ++I  F++L APWGG+V+ +   A
Sbjct:  223 QYIGGFISLGAPWGGSVKPLRVLA 246          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_MOUSE (Phosphatidylcholine-sterol acyltransferase OS=Mus musculus GN=Lcat PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.980e-18
Identity = 54/140 (38.57%), Postives = 80/140 (57.14%), Query Frame = 2
Query:   86 SRGLHPLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFR 505
            S    P+ILVPG  GN+LEA+L    KP  +    W    + +E +F +W D ++ LP    C+ D   + Y+       N+PGV+ RVP FG T+S+ Y+D N    ++ GY+ +LV++L   GYV  ET+  APYD+R
Sbjct:   43 SNHTRPVILVPGCLGNRLEAKLD---KPDVV---NWM-CYRKTEDFFTIWLDFNLFLPLGVDCWIDNTRIVYNHSSGRVSNAPGVQIRVPGFGKTESVEYVDDN----KLAGYLHTLVQNLVNNGYVRDETVRAAPYDWR 171          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_PAPAN (Phosphatidylcholine-sterol acyltransferase OS=Papio anubis GN=LCAT PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.109e-17
Identity = 55/140 (39.29%), Postives = 79/140 (56.43%), Query Frame = 2
Query:   86 SRGLHPLILVPGNGGNQLEARLTSDYKPSSLLCNRWYPIVKDSEGWFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFR 505
            S    P+ILVPG  GNQLEA+L    KP  +    W    + +E +F +W D ++ LP    C+ D   + Y+       N+PGV+ RVP FG T S+ YLD +    ++ GY+ +LV++L   GYV  ET+  APYD+R
Sbjct:   43 SNHTRPVILVPGCLGNQLEAKLD---KPDVV---NWM-CYRKTEDFFTIWLDLNMFLPLGVDCWIDNTRVVYNRSSGLVSNAPGVQIRVPGFGKTYSVEYLDSS----KLAGYLHTLVQNLVNNGYVRDETVRAAPYDWR 171          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_MICMN (Phosphatidylcholine-sterol acyltransferase (Fragment) OS=Micromys minutus GN=LCAT PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.442e-14
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 2
Query:  221 WFRLWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPV 613
            +F +W D ++ LP    C+ D   + Y+       N+PGV+ RVP FG T S+ YLD N    ++ GY+ +LV++L    YV  ET+  APYD+R        PS+   ++ Q L +L+E+  ++  GKPV
Sbjct:    1 FFTIWLDINMFLPLGVDCWIDNTRVVYNRSSGRMSNAPGVQIRVPGFGKTYSVEYLDDN----KLAGYLHTLVQNLVNNAYVRDETVRAAPYDWRLA------PSQ-QDEYYQKLAELVEEMYDAY-GKPV 119          
BLAST of EY659937 vs. ExPASy Swiss-Prot
Match: LCAT_TATKG (Phosphatidylcholine-sterol acyltransferase (Fragment) OS=Tatera kempi gambiana GN=LCAT PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.097e-12
Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 2
Query:  230 LWFDPSVLLPPFTKCFADRMMLYYDPDLDDFHNSPGVETRVPHFGSTQSLLYLDPNFIWKEITGYMASLVESLERVGYVTGETLFGAPYDFRYGLAAGGHPSRVGSKFLQDLKDLIEKASNSNGGKPV 613
            +W D ++ L     C+ D   + Y+       N+PGVE RVP FG T S+ YLD N    ++  YM +LV++L   GYV  ET+  APYD+R        PS+    + Q L  LIE+   +  GKPV
Sbjct:    2 IWLDLNMFLSLGVDCWIDNTRVVYNRSSGRVSNAPGVEIRVPGFGKTYSVEYLDDN----KLAEYMHTLVQNLVNNGYVRDETVRAAPYDWRL------EPSQ-QDDYYQKLAGLIEEMYAAY-GKPV 117          
The following BLAST results are available for this feature:
BLAST of EY659937 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
LCAT_RAT2.347e-2237.08Phosphatidylcholine-sterol acyltransferase OS=Ratt... [more]
LCAT_RABIT3.973e-2238.07Phosphatidylcholine-sterol acyltransferase OS=Oryc... [more]
PAG15_HUMAN1.140e-2137.21Group XV phospholipase A2 OS=Homo sapiens GN=PLA2G... [more]
LCAT_HUMAN1.481e-2136.36Phosphatidylcholine-sterol acyltransferase OS=Homo... [more]
PAG15_MOUSE2.509e-2136.63Group XV phospholipase A2 OS=Mus musculus GN=Pla2g... [more]
LCAT_CHICK9.956e-2036.02Phosphatidylcholine-sterol acyltransferase (Fragme... [more]
LCAT_MOUSE4.980e-1838.57Phosphatidylcholine-sterol acyltransferase OS=Mus ... [more]
LCAT_PAPAN1.109e-1739.29Phosphatidylcholine-sterol acyltransferase OS=Papi... [more]
LCAT_MICMN7.442e-1435.88Phosphatidylcholine-sterol acyltransferase (Fragme... [more]
LCAT_TATKG9.097e-1237.50Phosphatidylcholine-sterol acyltransferase (Fragme... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-G04-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659937 ID=EY659937; Name=EY659937; organism=Citrus sinensis; type=EST; length=917bp
ACACGGGCGTNCGGNGAAAAAATTTCCAGAAGAAAGGATTGCGTTTCATA
GTAGCAATGTCGTTGTTTTGCACGTGTCTTGCACCAGTCGCGGTCTCCAC
CCTCTGATCTTGGTACCCGGCAACGGCGGAAACCAGCTAGAAGCGCGGCT
GACCAGTGATTACAAGCCCTCGAGCCTGCTGTGCAACCGTTGGTACCCAA
TTGTGAAGGACAGTGAAGGGTGGTTCAGGCTGTGGTTCGACCCCAGTGTT
TTGTTACCTCCGTTTACTAAGTGCTTTGCCGACCGCATGATGCTTTACTA
TGATCCTGATTTGGATGATTTTCACAATTCCCCTGGCGTCGAAACTAGAG
TCCCTCACTTTGGTTCCACTCAGTCCCTTCTCTACCTCGACCCCAATTTT
ATTTGGAAGGAAATTACAGGGTACATGGCATCTTTAGTGGAGTCTCTAGA
ACGAGTTGGCTATGTCACTGGTGAAACTCTCTTCGGAGCTCCATACGATT
TCCGATACGGATTGGCAGCAGGAGGTCATCCGTCCCGCGTTGGCTCCAAG
TTTTTGCAGGACCTGAAGGATTTGATAGAAAAAGCAAGCAATTCCAATGG
TGGGAAGCCAGTTATACTTGTTTCACACAGCTTGGGAGGGCTTTGCGTCC
TACNACTTCTTAACCCGAACCCTTTANCCTGGCGCAAGAATTTATCAAAC
ACTTTGTCGCTCTGTCTGCTCCGTGGGGTGGCACCGTCGAAAGAATGCTC
ACTTTTGCTCAGGCAGTACGCTAGGAAGTCCATTCGNTGATCCATTGGAT
GTGAGACAGAGCAGAAGAGCTCTGAAAGCAATCTATGCTCATGCCTATCC
CAAAGTGGTTGGGAGGCAAAAACGGTGGTTTTACCCCGATGCTACTTATC
AGCGATGATATCCTGAA
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