EY659931

Overview
NameEY659931
Unique NameEY659931
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7329 contig Csv1_Contig7329:1..735. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659931 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.270e-36
Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 3 
Query:  231 RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 566
            ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:   54 QKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164
The following BLAST results are available for this feature:
BLAST of EY659931 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH2.270e-3669.64Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-F10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659931 ID=EY659931; Name=EY659931; organism=Citrus sinensis; type=EST; length=756bp
AGTGGACGCCTGCAGTACGGTCCGGAATCCTTCCAAAAAGGGGCGTCCGG
AAAAAACTCCCAAAAAAAGTATCAATGGCAGCGACGGCGTACGCGGCGGT
GTTAACTCCACTTGTCCCCTCAACCACCACCGTCAAAGTCAAATCTTCTC
ACTGCTTTGCTCTTCCCTGCCTCCCTCCTCGTTCGTCAACGTCACCATTC
TCTTCTTCCATTAAACAAGTTTCAGAGTCGAGAAGGTTTCCTTTGCTTCA
GGTTAGAGCCTCTTCCTCAGAAGAGACATCCACAGTTGATGCAGATGAAC
TTTTTTCAGACTTGAAGGAAAAGTGGGATGCCGTTGAAAACAAGTCCACG
GTACTTCTCTATGGAGGCGGGGCAATAGTGGCTGTTTGGTTATCCTCAAC
TATTGTTGGTGCCATCAATTCAGTGCCTTTGCTTCCCAAACTCTTGGAGT
TGATTGGACTTGGTTATACTGGATGGTTTGTCTACAGATACCTTCTCTTC
AAGTCAAGCAGAAAAGAACTAGCCACGGATATTGAAGCACTGAAGAAGAA
GATTGCTGGAACTGAATAGATTGTACATTCTGGAGGCAATTCATGTTTGT
CCCTGATAGTCATTTATTTTGGTCCTCTATCATTGCATATGAGGCACTTG
TATCCTGTAGAGTAGGCTGCGTACGGATTCGTTTTATCCCTGTATTTTCC
AGTATATCCCTGGAATAAGAGATTTGACAAGTTATGTGTAAAAAAAAAAA
AAAAAA
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