EY659917

Overview
NameEY659917
Unique NameEY659917
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7545 contig Csv1_Contig7545:131..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY659917 vs. ExPASy Swiss-Prot
Match: YIHQ_ECOLI (Alpha-glucosidase yihQ OS=Escherichia coli (strain K12) GN=yihQ PE=3 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 4.298e-15
Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 3 
Query:   12 VYRAWKFYRIKLVIVAPQKGLPVCRHLFLHYPDDDKVQRLSYQQFLVGTEILVVPILDKGKKKVRVYFPVGETSTWQHIWTEKIFTGQGSEAWVEAPIGYPAVFVKADS 338
            V+   K Y  + V +  + GLPV R LFLHY DD     L Y Q+L+G +ILV P+ ++G+    +Y P      W H WT + F  +G E  V APIG P VF +ADS
Sbjct:  564 VFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAHTYTLKY-QYLLGRDILVAPVHEEGRSDWTLYLP---EDNWVHAWTGEAF--RGGEVTVNAPIGKPPVFYRADS 666
The following BLAST results are available for this feature:
BLAST of EY659917 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YIHQ_ECOLI4.298e-1542.20Alpha-glucosidase yihQ OS=Escherichia coli (strain... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-E07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659917 ID=EY659917; Name=EY659917; organism=Citrus sinensis; type=EST; length=540bp
CTAAAAAATAGGTATATAGAGCATGGAAATTCTACAGAATCAAACTTGTA
ATTGTGGCCCCTCAGAAAGGTCTTCCTGTATGCCGTCACCTATTTCTCCA
CTACCCAGATGATGACAAGGTGCAGAGATTGAGTTACCAGCAGTTTTTGG
TGGGTACTGAGATCTTAGTTGTGCCAATCCTAGACAAAGGAAAGAAGAAA
GTCAGAGTTTATTTTCCAGTTGGAGAAACCAGCACTTGGCAACATATTTG
GACGGAAAAGATATTTACAGGGCAAGGTTCTGAAGCTTGGGTGGAAGCTC
CAATTGGCTATCCTGCTGTATTTGTTAAGGCTGATTCCATTGTTGGAGAA
ACTTTTAGGAAAAACCTAAGAAATTCAGACATTCTTTAAGAAAGCAGCTC
AAAAGGGAGGGCTGGTTTCTTAATTCTGTTTCAATGAGTAGACTGATTTC
TGCAATAACATTTAACTTAGAATAGTAATNNNNNNNANNNANANNNNAAN
AANAANAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAA
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