EY659878

Overview
NameEY659878
Unique NameEY659878
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length932
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 5.674e-86
Identity = 150/209 (71.77%), Postives = 166/209 (79.43%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA*RY*WVRLTT*SMIIALDNHDTQYPHREC 634
            ++IKL P  SAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN  +    +P +QPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYY+DFDIEGCPVPGP  C SNP NWWE   YQ+L A+EA RY WVR+         D      P  EC
Sbjct:   82 MKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPEC 290          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 305.834 bits (782), Expect = 2.231e-82
Identity = 142/212 (66.98%), Postives = 167/212 (78.77%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPANCASNPGNWWEANNYQALTAMEA*RY*WVRLTT*SMIIALDNHDTQYPHRECLPG 643
            ++IKL P  SAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGDREQRVNLWFDP+ D+H Y I WNH  IVFYVD+VPIRVYKN  + + P+P  QPMGVYSTLWEADDWATRGG+EKI+WS+APFYAYY+DFDIEGCPVPGPA+C +N  NWWE + Y  L+ +EA  Y WVR+         D      P  EC  G
Sbjct:   81 MKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAG 292          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 3.688e-61
Identity = 107/188 (56.91%), Postives = 132/188 (70.21%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            + IK+    SAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G+REQR+NLWFDP+ DYH Y++LWN + IVF+VDDVPIRV+KNS      FP NQPM +YS+LW ADDWATRGGLEK +W KAPF A YR F ++GC     A  C +    WW+   +Q L A +  R  WVR
Sbjct:   79 MHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVR 265          

HSP 2 Score: 30.4166 bits (67), Expect = 3.688e-61
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYPVPPP 627
            + IY+YCT   R+PVPPP
Sbjct:  268 YTIYNYCTDRVRFPVPPP 285          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 1.513e-59
Identity = 109/186 (58.60%), Postives = 131/186 (70.43%), Query Frame = 2
Query:   20 IKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            IKL P  SAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVFYVDD PIRV+KNS      FP NQPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A +  +  WVR
Sbjct:   80 IKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWQKLAWVR 264          

HSP 2 Score: 24.2534 bits (51), Expect = 1.513e-59
Identity = 10/26 (38.46%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  550 KILMGSSHHMIYDYCTG*SRYPVPPP 627
            K+    + + IY+YCT   RY   PP
Sbjct:  259 KLAWVRNKYTIYNYCTDRKRYSQVPP 284          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 1.263e-58
Identity = 105/190 (55.26%), Postives = 129/190 (67.89%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            +++KL    SAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN   IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK DWS APF A Y  F ++GC    P     C +    WW+   +Q L A++  R  WVR
Sbjct:   79 MKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTDWSNAPFTASYTSFHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVR 267          

HSP 2 Score: 27.335 bits (59), Expect = 1.263e-58
Identity = 10/18 (55.56%), Postives = 12/18 (66.67%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYPVPPP 627
            + IY+YCT   RYP  PP
Sbjct:  270 YTIYNYCTDRKRYPTLPP 287          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 1.264e-58
Identity = 107/188 (56.91%), Postives = 131/188 (69.68%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            + IKL    SAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  DYH Y++LWN + I F+VDD PIRV+KNS      +P +QPM +YS+LW ADDWATRGG EK DWSKAPF A YR F ++GC     A  CA+    WW+   +Q L A +  R  WVR
Sbjct:   79 MHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFVASYRGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVR 265          

HSP 2 Score: 23.8682 bits (50), Expect = 1.264e-58
Identity = 9/18 (50.00%), Postives = 10/18 (55.56%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYPVPPP 627
            H IY+YCT   RY    P
Sbjct:  268 HTIYNYCTDHDRYAAMAP 285          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 1.647e-58
Identity = 107/186 (57.53%), Postives = 132/186 (70.97%), Query Frame = 2
Query:   20 IKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            IK+ P  SAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +YH Y+ILWN + IVF+VD+VPIRV+KNS      FP +QPM +Y++LW ADDWATRGGLEK DWSKAPF A Y+ F I+GC     A  C +    WW+   ++ L A +  R  WVR
Sbjct:   82 IKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWWDQPEFRDLDAAQWRRLRWVR 266          

HSP 2 Score: 24.6386 bits (52), Expect = 1.647e-58
Identity = 10/19 (52.63%), Postives = 13/19 (68.42%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYP-VPPP 627
            + IY+YCT   RYP + PP
Sbjct:  269 YTIYNYCTDTKRYPHISPP 287          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.800e-58
Identity = 101/190 (53.16%), Postives = 130/190 (68.42%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN---CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            ++++L    SAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR+ LWFDP   YH Y++LWN + IV +VDDVPIR +KNS      FP NQPM +YS+LW+ADDWATRGGLEK +W+ APF A Y  F ++GC    P     C +    WW+   +Q L A++  R  WVR
Sbjct:   80 MKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVR 268          

HSP 2 Score: 32.7278 bits (73), Expect = 2.800e-58
Identity = 11/18 (61.11%), Postives = 15/18 (83.33%), Query Frame = 1
Query:  574 HMIYDYCTG*SRYPVPPP 627
            + +Y+YCT  +RYPVPPP
Sbjct:  271 YTVYNYCTDKARYPVPPP 288          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 1.793e-57
Identity = 103/188 (54.79%), Postives = 130/188 (69.15%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVR 568
            + IK+ P  SAGTVTAF ++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVF VD++PIRV+KN       FP NQPM VY++LW ADDWATRGGLEK DWSKAPF A Y+ F ++GC     +  CA+    WW+   ++ L + +  R  WVR
Sbjct:   79 MNIKMVPGDSAGTVTAFCLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKAYHRYSVLWNMYQIVFLVDNIPIRVFKNLKELGVKFPFNQPMKVYNSLWNADDWATRGGLEKTDWSKAPFVAEYKGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVR 265          

HSP 2 Score: 26.5646 bits (57), Expect = 1.793e-57
Identity = 10/16 (62.50%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  580 IYDYCTG*SRYPVPPP 627
            IY+YCT  +RYP  PP
Sbjct:  270 IYNYCTDRTRYPQLPP 285          
BLAST of EY659878 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 8.805e-57
Identity = 104/189 (55.03%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   14 VRIKLCP*RSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMNQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYRDFDIEGCPVPGPAN-CASNPGNWWEANNYQALTAMEA*RY*WVRL 571
            + IKL    +AG VTAFY++S T N  DE+DFEFLGNRTGQP  +QTN++  GKG+REQR+ LWFDP+  YH Y++LWN + IVF+VD++PIRV+KN+      FP NQPM +YS+LW ADDWATRGGLEK +W+ APF A YR F I+GC     A  CA+    WW+ N ++ L A +  R  WVR+
Sbjct:   81 MHIKLPAGDTAGVVTAFYLSS-TNNEHDEIDFEFLGNRTGQPVILQTNVFTGGKGNREQRIYLWFDPSKAYHTYSVLWNLYQIVFFVDNIPIRVFKNAKDLGVRFPFNQPMKLYSSLWNADDWATRGGLEKTNWANAPFIASYRGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRM 268          

HSP 2 Score: 25.0238 bits (53), Expect = 8.805e-57
Identity = 9/15 (60.00%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  580 IYDYCTG*SRYPVPP 624
            IY+YCT  +R+PV P
Sbjct:  272 IYNYCTDRTRFPVMP 286          
The following BLAST results are available for this feature:
BLAST of EY659878 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH6_ARATH5.674e-8671.77Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH2.231e-8266.98Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH3.688e-6156.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.513e-5958.60Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH_TOBAC1.263e-5855.26Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT1.264e-5856.91Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN1.647e-5857.53Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC2.800e-5853.16Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHB_PHAAN1.793e-5754.79Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB8.805e-5755.03Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-016-B01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659878 ID=EY659878; Name=EY659878; organism=Citrus sinensis; type=EST; length=932bp
TCCTAAAAGACGCGTCCGGATCAAGCTCTGCCCCTGAAGATCTGCTGGAA
CTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTCCGAGACGAG
CTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGGTCCA
GACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTGAACC
TCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTGGAAC
CATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTTACAA
AAACAGTGGAAGGGCTCCATTTCCAATGAACCAACCCATGGGGGTGTATT
CGACGCTGTGGGAAGCAGATGACTGGGCAACAAGAGGTGGTCTAGAGAAA
ATAGATTGGAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGATAT
TGAGGGCTGCCCAGTTCCTGGACCAGCAAACTGTGCCTCGAACCCAGGTA
ACTGGTGGGAGGCTAATAATTATCAAGCCCTCACCGCCATGGAAGCATGA
AGATACTGATGGGTTCGTCTCACCACATGATCTATGATTATTGCACTGGA
TAATCACGATACCCAGTACCCCCACCGAGAATGCTTGCCGGGATATCAAT
TCGACCGTCGATTAATTCAGCAGATGGACGGTAGCTCATATCCGGATGCT
ATCATGCATATTACTTCACGTACACGTCCTTTGGAGTCATCCTATTCAGG
GGAAAGACTTTACGCATATCCAGGGAAGGGCAGGAGGAAAATAAACAGTG
TGGGCTTTTAATGCAATATTGGAGTGGAAAAATGTGGGAATTCGATCCCT
TCGTCAAAATAAGCCGGATTTCCGCCCAGATCCGGGCAAATAAAACCGTT
CTATTGGGATAACCAAATGGGTCAAAAAAAGG
back to top