EY659839

Overview
NameEY659839
Unique NameEY659839
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: QORL_ARATH (Quinone oxidoreductase-like protein At1g23740, chloroplastic OS=Arabidopsis thaliana GN=At1g23740 PE=1 SV=2)

HSP 1 Score: 286.574 bits (732), Expect = 1.290e-76
Identity = 141/207 (68.12%), Postives = 174/207 (84.06%), Query Frame = -3
Query:  195 GSLAEYTAVKRSI-ALKPKNLSFVEAASLPLATETAYEGLERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKALKAVKEGGRVVSIIGSVTPPASSFVLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHPIP 812
            GSLAEYTAV+  + ALKPKN+ F +AA LPLA ETA EGL R+ FSAGKSILVL GAGGVG++VIQLAKHV+G           KL+L+RSLGADLAIDYTKENIEDLP+K+DVVFDA+G CDKA+K +KEGG+VV++ G+VTPP   FV+TS+G +L+KLNPY+ESGKVK ++DPKGPFPFS+  +AFS+LE++ ATGKVV++PIP
Sbjct:  180 GSLAEYTAVEEKLLALKPKNIDFAQAAGLPLAIETADEGLVRTEFSAGKSILVLNGAGGVGSLVIQLAKHVYGASKVAATASTEKLELVRSLGADLAIDYTKENIEDLPDKYDVVFDAIGMCDKAVKVIKEGGKVVALTGAVTPPGFRFVVTSNGDVLKKLNPYIESGKVKPVVDPKGPFPFSRVADAFSYLETNHATGKVVVYPIP 386          
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: RT4I1_DANRE (Reticulon-4-interacting protein 1 homolog, mitochondrial OS=Danio rerio GN=rtn4ip1 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.701e-16
Identity = 76/245 (31.02%), Postives = 117/245 (47.76%), Query Frame = -3
Query:  207 GSLAEYTAVK-RSIALKPKNLSFVEAASLPLATETAYEGLERSAF-----SAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAIDYTKENIEDL---PEKFDVVFDAV-GQCDK-ALKAVK--EGGRVVSII----------GSVTPPASSFV--------------------LTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 812
            GSLAE+  V    ++ KPK+L   EAAS+P    TA+  +  +       SA K +L+LGG+GGVGT  IQ+ K  +G           +  L+R LGAD  +DYT   +E      EKFD++ D++ G+ +K AL  +K   G + V++I          G       S V                        GS L++++  +++GKV+ +++    F F+Q  EAF  +E   A GK V+
Sbjct:  139 GSLAEFVVVSGNEVSHKPKSLRHDEAASIPYVAATAWSAIVNTGGLNKDNSAKKRVLILGGSGGVGTFAIQMVK-AWGAHVTVTCSQNAE-RLVRDLGADDVVDYTAGPVEKQLKNLEKFDLILDSIGGETEKWALDLLKPWSGAKFVTLITPFLQNTDRLGLADGMMQSAVTVGCKVVKNLRKGVHYRWGFFAPSGSALDEVSEMVDAGKVRPVVEE--VFSFAQVPEAFQKVEQGHARGKTVV 379          
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: QORL2_NEMVE (Quinone oxidoreductase-like protein 2 homolog OS=Nematostella vectensis GN=v1g238856 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.717e-12
Identity = 67/238 (28.15%), Postives = 113/238 (47.48%), Query Frame = -3
Query:  204 GSLAEYTAVKRSIALK-PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAIDYTKENIEDLPEKF------DVVFDAVG-----QCDKALKAVKEGGRVVSI---IGSVTPPASSFVLTSDGS-------------------MLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIH 812
            G +AE   + ++   K P +LSF +AA+L ++  TAY GL+  A    G+++LV   AG +G   + LA +VFG           KL +++ +GA   IDYT+ENI+D  ++       +V+ +AVG     QC   LK +   G ++ +    G +    ++ +L  + S                    ++K   Y ++GK+K        F   +  EAF  +   ++TGKVVI+
Sbjct:  130 GGMAEECVLPQTALWKIPSSLSFTQAAALAISYGTAYIGLKHKANLQPGQTVLVTAAAGALGLASVDLAANVFG-AKVIGASRKEKLVIVQEIGATATIDYTRENIKDKVKELTDGHGANVIMEAVGGDVFKQC---LKCIAWNGYIIPVGFASGEIPQIPANILLVKNCSAVGLYWGAHSKHDPQLLRESVDKTLEYFKNGKLKGPY-ISASFGLDKVNEAFQMILQRKSTGKVVIN 362          
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: QORH_ARATH (Putative quinone-oxidoreductase homolog, chloroplastic OS=Arabidopsis thaliana GN=At4g13010 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.995e-12
Identity = 65/231 (28.14%), Postives = 99/231 (42.86%), Query Frame = -3
Query:  201 GSLAEYTAVKRSIALK-PKNLSFVEAASLPLATETAYEGLERSAF----SAGK--SILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAIDYTKENIEDLPEKFDVVFDAVGQCDKAL------KAVKEGGRVVSI-----------IGSVTPPASSFV---LTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 812
            G LAE+      + +K P+ +   EAA+LP+A  TA + L   A       GK  +ILV   +GGVG   +QLAK                ++ ++SLGAD  +DY       L       +DAV  C   +        + E G+V+ I           +  +T      V   L      LE +   ++ GKVK +ID K   P S+  +A++      ATGK+++ P
Sbjct:  103 GGLAEFAVATEKLTVKRPQEVGAAEAAALPVAGLTALQALTNPAGLKLDGTGKKANILVTAASGGVGHYAVQLAK--LANAHVTATCGARNIEFVKSLGADEVLDYKTPEGAALKSPSGKKYDAVVHCANGIPFSVFEPNLSENGKVIDITPGPNAMWTYAVKKITMSKKQLVPLLLIPKAENLEFMVNLVKEGKVKTVIDSK--HPLSKAEDAWAKSIDGHATGKIIVEP 329          
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: YBI2_SCHPO (Zinc-type alcohol dehydrogenase-like protein C16A3.02c OS=Schizosaccharomyces pombe GN=SPBC16A3.02c PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.898e-11
Identity = 66/216 (30.56%), Postives = 93/216 (43.06%), Query Frame = -3
Query:  207 PKNLSFVEAASLPLATETAYEGLERSA-FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAIDYTKEN-IEDLPE--KFDVVFDAVGQCDKAL-----KAVKEGGRVVSIIGSVT---------------------PPASSFVLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 764
            P  +SF E A   +A  TA+E L R      G  +++ G +GGVGT  + LAK +              LDL +SLGA   +DY K+N +E L +   +D VFD V   D  L     K VK  G    I G +T                         + +L  D  ML     ++    +K +ID    + F  T+EAF+ L + R  GKV+I
Sbjct:  135 PDGVSFNEGAGFGIAGLTAWEVLVRQMKVKPGTKLVIEGASGGVGTFAVALAKAL--ECEVTTISSTENLDLCKSLGATHTLDYKKDNLVERLADLGPYDFVFDCVN--DNVLYRASSKFVKPDGAFFGIGGDITLSYVGSRLSRTLRPRVLGGSSHSYYNILLHVDQEMLRDFVDFVMKHNIKTVID--SVYDFEDTVEAFNRLMTHRCKGKVII 344          
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: QORH_SPIOL (Quinone-oxidoreductase homolog, chloroplastic OS=Spinacia oleracea GN=QOR PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.479e-11
Identity = 65/231 (28.14%), Postives = 103/231 (44.59%), Query Frame = -3
Query:  201 GSLAEYTAVKRSIAL-KPKNLSFVEAASLPLATETAYEGLERSA------FSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAIDYTKENIEDLP----EKFD-VVFDAVGQCDKALKA-VKEGGRVVSIIGSVTPPAS--------------SFVLTSDGSMLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVIHP 812
            G+LAEY   K ++ + +P  +S  E A+LP+A  TA++ L + A          K+IL+   +GGVG   +QLAK   G            LD ++ LGAD  +DY       L     +K+D VV  A G      +  + E G+V+ +    T   +                +L       E +   ++  K+K +ID K   P S+  +A+S +    ATGK++I P
Sbjct:  103 GALAEYAVAKENLTVARPPEVSAAEGAALPVAALTAHQALTQFANIKLDGSGERKNILITAASGGVGHYAVQLAK--LGNTHVTATCGARNLDFVKGLGADEVLDYKTPEGASLTSPSGKKYDYVVHGASGIPWSTFEPNLSEAGKVIDLTPGPTAMMTFAWKKLTFSKKQLVPLLLIPKIPNFEYVVNLVKEKKLKTVIDSK--HPLSKGEDAWSRIMGGHATGKIIIEP 329          
BLAST of EY659839 vs. ExPASy Swiss-Prot
Match: YOGA_BACSU (Uncharacterized zinc-type alcohol dehydrogenase-like protein yogA OS=Bacillus subtilis GN=yogA PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.212e-11
Identity = 62/221 (28.05%), Postives = 104/221 (47.06%), Query Frame = -3
Query:  207 NGSLAEYTAVKRSIALK-PKNLSFVEAASLPLATETAYEGL-ERSAFSAGKSILVLGGAGGVGTMVIQLAKHVFGXXXXXXXXXXXKLDLLRSLGADLAID-YTKENIEDLPEKFDVVFDAVGQC--DKALKAVKEGGRVVSI-----------IGSVTPPASSFVLTSDGS--MLEKLNPYLESGKVKAIIDPKGPFPFSQTLEAFSHLESSRATGKVVI 815
            +G+LAEY  +    A+K P  LS+ EA  LPL+  TAY  L  +     G+ +L+ G   GV T  + +AK +             +   L+ LGAD A D Y+  + +   +K DVV D++G     +  + VK  GR+VS            + S+  P  + + TS GS    + +  +++  K++ +ID    +P  +  EA+  ++  R  G + I
Sbjct:  109 DGTLAEYVIIPSQNAIKKPAYLSWEEAGVLPLSALTAYRALFTKGQLKKGEHLLIPGIGSGVATYALFMAKAIGATVSVTSRSEEKRKKALK-LGADYAFDSYSNWDEQLQGKKIDVVLDSIGPALFSEYFRHVKPNGRIVSFGASSGDNLSFPVRSLFFPQVNVLGTSMGSGEEFQAMLAFIDKHKLRPVID--RIYPLEKACEAYKRMQEGRQFGNIGI 326          
The following BLAST results are available for this feature:
BLAST of EY659839 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
QORL_ARATH1.290e-7668.12Quinone oxidoreductase-like protein At1g23740, chl... [more]
RT4I1_DANRE5.701e-1631.02Reticulon-4-interacting protein 1 homolog, mitocho... [more]
QORL2_NEMVE1.717e-1228.15Quinone oxidoreductase-like protein 2 homolog OS=N... [more]
QORH_ARATH4.995e-1228.14Putative quinone-oxidoreductase homolog, chloropla... [more]
YBI2_SCHPO1.898e-1130.56Zinc-type alcohol dehydrogenase-like protein C16A3... [more]
QORH_SPIOL2.479e-1128.14Quinone-oxidoreductase homolog, chloroplastic OS=S... [more]
YOGA_BACSU7.212e-1128.05Uncharacterized zinc-type alcohol dehydrogenase-li... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-F08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659839 ID=EY659839; Name=EY659839; organism=Citrus sinensis; type=EST; length=883bp
TTTCAAAAACCACGCGTCCGGCGAGCGTTCCAAAAAAAGGTTTTTTTTTT
TTTTATTAAAACTCCCTTAAGCATCTTTTTAGTTTTACCATCAATTGACC
ACACTCTTATTTATTGCCAAGCATATAGTCTAATCGATTACATAATTTAG
GTAGTCACACACATTATATCCAGCATTCATTTGTTTTCCGCTCATGGGAT
TGGATGTATGACAACTTTTCCAGTAGCTCTGCTGGATTCAAGGTGGGAAA
ATGCTTCTAAGGTCTGAGAGAATGGAAACGGACCTTTTGGGTCAATAATT
GCTTTCACTTTCCCACTCTCCAAATAAGGATTTAATTTCTCCAACATAGA
TCCATCCGAAGTCAACACAAACGAGGAAGCTGGTGGAGTTACTGAACCAA
TAATTGAAACGACTCTCCCGCCTTCTTTCACTGCCTTCAATGCCTTGTCA
CATTGCCCAACTGCATCAAACACTACATCAAATTTCTCAGGCAGGTCTTC
AATGTTTTCCTTGGTGTAATCAATAGCCAAATCAGCACCCAAGCTCCTTA
ACAAGTCCAGCTTTGCAGTGCTAGAGGTAGCTGCTACTTTAGATGCACCA
AAGACATGCTTAGCTAGCTGAATCACCATGGTGCCAACTCCACCAGCTCC
ACCTAAAACAAGAATAGATTTACCGGCGGAAAAGGCAGAACGTTCAAGAC
CTTCATAGGCAGTCTCAGTGGCAAGGGGAAGGCTTGCAGCCTCAACAAAA
CTCAGGTTTTTGGGCTTGAGAGCAATAGATCTCTTCACAGCAGTGTACTC
AGCTAAGGAGCCATTCGNTTAGGATGATCCATGGCTTCTCATTATATCTC
ATAAACTCATCTCTACCTAAACTTCTTACTTGC
back to top