EY659821

Overview
NameEY659821
Unique NameEY659821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig113 contig Csv1_Contig113:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DER22_ARATH (Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 8.217e-57
Identity = 108/133 (81.20%), Postives = 116/133 (87.22%), Query Frame = 3 
Query:   51 LIVAIIRDLXESFAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPANVRFAPPPAEEVHQD 449
            LI  +I  L  SFAKIIFLSN L  MMVYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+ VGASAWVDLLGMIAGHAYYFL +VYPRMT RRPLKTPSF+KALFADE VVVARP +VRFA  P +E+HQD
Sbjct:  112 LIGGMIPYLSASFAKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGMIAGHAYYFLAEVYPRMTNRRPLKTPSFLKALFADEPVVVARPEDVRFAAAPFDEIHQD 244
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DER21_ARATH (Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=2)

HSP 1 Score: 211.46 bits (537), Expect = 3.817e-54
Identity = 104/133 (78.20%), Postives = 113/133 (84.96%), Query Frame = 3 
Query:   51 LIVAIIRDLXESFAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPANVRFAPPPAEEVHQD 449
            LI  +I  L  SF+KIIFLSN L  MMVYVWSKQNP+IHMSFLGLFTFTAAYLPWVLLGFS+ VGASAW D LGMIAGHAYYFL  VYPRMT RRPLKTPSF+KALFADE VV+ARP +VRFA  P +E+HQD
Sbjct:  112 LIGGMIPYLSVSFSKIIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGMIAGHAYYFLAFVYPRMTDRRPLKTPSFLKALFADEPVVIARPEDVRFAHAPFDEIHQD 244
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DERL2_ORYSJ (Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 3.950e-51
Identity = 97/119 (81.51%), Postives = 105/119 (88.24%), Query Frame = 3 
Query:   51 LIVAIIRDLXESFAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPAN 407
            LI  +I  + E+FA+I+FLSN L  MMVYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+ VG+S WVDLLGMIAGH YYFLEDVYPRMTGRRPLKTPSFIKALFAD+ VVVARP N
Sbjct:  112 LIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVARPPN 230
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DER22_MAIZE (Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.149e-50
Identity = 96/119 (80.67%), Postives = 105/119 (88.24%), Query Frame = 3 
Query:   51 LIVAIIRDLXESFAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPAN 407
            LI  +I  + E+FA+I+FLSN L  MMVYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+ VG+S WVDLLGMIAGH YYFLEDVYPRMTGRRPLKTPSFIKALFAD+ VVVA+P N
Sbjct:  112 LIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVAQPPN 230
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DER21_MAIZE (Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.149e-50
Identity = 96/119 (80.67%), Postives = 105/119 (88.24%), Query Frame = 3 
Query:   51 LIVAIIRDLXESFAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKALFADEAVVVARPAN 407
            LI  +I  + E+FA+I+FLSN L  MMVYVWSK NPFIHMSFLGLFTFTAAYLPWVLLGFS+ VG+S WVDLLGMIAGH YYFLEDVYPRMTGRRPLKTPSFIKALFAD+ VVVA+P N
Sbjct:  112 LIGGMIPYISETFARILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGMIAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFADDNVVVAQPPN 230
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DERL2_PONAB (Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 3 
Query:   87 FAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGR-RPLKTPSFIKALF 371
            F  ++FL     +M+VYVWS++NP++ M+F GL  F A +LPWVL+GFS+ +G S  VDLLG+  GH Y+FLEDV+P   G  R LKTPS +KA+F
Sbjct:  114 FVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPSILKAIF 209
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DERL2_HUMAN (Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 51/96 (53.12%), Postives = 69/96 (71.88%), Query Frame = 3 
Query:   87 FAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGR-RPLKTPSFIKALF 371
            F  ++FL     +M+VYVWS++NP++ M+F GL  F A +LPWVL+GFS+ +G S  VDLLG+  GH Y+FLEDV+P   G  R LKTPS +KA+F
Sbjct:  114 FVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDVFPNQPGGIRILKTPSILKAIF 209
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DERL2_DICDI (Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.350e-25
Identity = 51/92 (55.43%), Postives = 67/92 (72.83%), Query Frame = 3 
Query:   93 KIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGRRPLKTPSFIKAL 368
            K++FL+  +  M++YVWS++NP +H+SFLGLFTF+A YLPWV+L            DLLG +AGHAYYFLED YP ++ RR LKTP F+K L
Sbjct:  122 KVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLLGAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNL 213
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DERL2_MOUSE (Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 5.375e-24
Identity = 48/96 (50.00%), Postives = 68/96 (70.83%), Query Frame = 3 
Query:   87 FAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYPRMTGR-RPLKTPSFIKALF 371
            F  ++FL     +M+VYVWS++NP++ M+F GL  F A +LPWVL+GFS+ +G S  VDLLG+  GH Y+FLED++P   G  R LKTPS ++ +F
Sbjct:  114 FVSLVFLGQAFTIMLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLEDIFPNQPGGIRILKTPSILRTIF 209
[Close]
BLAST of EY659821 vs. ExPASy Swiss-Prot
Match: DERL2_CAEEL (Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 7.021e-24
Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 3 
Query:   51 LIVAIIRDLXESFAKIIFLSNFLPLMMVYVWSKQNPFIHMSFLGLFTFTAAYLPWVLLGFSVFVGASAWVDLLGMIAGHAYYFLEDVYP-RMTGRRPLKTPSFIKALF 371
            L  A++  L   F +I+FL     +M+VY+WS++NP I M+F G+ TFTA YLPWVLL FS+ +G +A VD +G+  GH Y+FLEDV+P +  G+R LKTP ++  LF
Sbjct:  100 LFGAVLMILSGIFVQILFLGQAFTIMLVYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDVFPFQEHGKRFLKTPQWLVYLF 207
The following BLAST results are available for this feature:
BLAST of EY659821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
DER22_ARATH8.217e-5781.20Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 ... [more]
DER21_ARATH3.817e-5478.20Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 ... [more]
DERL2_ORYSJ3.950e-5181.51Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 P... [more]
DER22_MAIZE1.149e-5080.67Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1[more]
DER21_MAIZE1.149e-5080.67Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2[more]
DERL2_PONAB6.350e-2553.13Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1[more]
DERL2_HUMAN6.350e-2553.13Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1[more]
DERL2_DICDI6.350e-2555.43Probable derlin-2 homolog OS=Dictyostelium discoid... [more]
DERL2_MOUSE5.375e-2450.00Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2[more]
DERL2_CAEEL7.021e-2449.07Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-015-E01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659821 ID=EY659821; Name=EY659821; organism=Citrus sinensis; type=EST; length=727bp
GTCATCTTATGATACGGNCCGGAATTCCCTCGAAAAAGAGGCGTCCGGNT
CTTATTGTGGCGATAATAAGGGACTTGNCAGAATCATTTGCAAAAATCAT
TTTCCTTAGCAATTTTTTGCCCCTCATGATGGTTTATGTATGGAGCAAAC
AAAATCCTTTCATCCACATGAGTTTTTTGGGCCTTTTTACATTTACAGCA
GCTTACTTACCATGGGTGCTCTTGGGATTCTCAGTCTTCGTTGGCGCTAG
CGCTTGGGTGGATTTGCTGGGGATGATAGCCGGTCATGCCTACTATTTTC
TCGAAGATGTTTATCCTAGGATGACAGGTCGCCGGCCCTTAAAAACACCA
TCTTTTATCAAAGCACTGTTTGCGGATGAGGCTGTAGTGGTAGCACGGCC
TGCAAATGTGAGATTTGCTCCACCACCTGCAGAGGAAGTTCACCAAGACT
AATGAGAACCTTTGAGGGATGGGACTCTCTTGAGGGCTCACTTTTGGTTT
GTATTGATCTGTATGGGAAATCTGCGACCTGCAGAAGTGTTGTTTGACCA
TGTCTTGAAAGTATTTATGTGAACTAACTAATTATGGTGTTTATGTCATA
CGTACATTACAGATTAACTTTGGATATGGTAAATCCTGTTGGTGGTAAAT
CTGTCTGGAATTTGAAAATGAATTTTGTAATCTATACCTAGAGGAATGAA
AGATTGTAGTTAGTACAAAAAAAAAAA
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