EY659755

Overview
NameEY659755
Unique NameEY659755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659755 vs. ExPASy Swiss-Prot
Match: GME1_ORYSJ (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. japonica GN=GME-1 PE=1 SV=1)

HSP 1 Score: 401.364 bits (1030), Expect = 3.675e-111
Identity = 200/230 (86.96%), Postives = 206/230 (89.57%), Query Frame = 3
Query:   87 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLCSXELCKHYTKDFGIECRVGRSTNIMGPFEHGK-VEGKSSCCFCRKALTS 764
            MGS+E  GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL + ELCKHYTKDFGIECRVGR  NI GPF   K    K+   FCRKA TS
Sbjct:    1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTS 230          
BLAST of EY659755 vs. ExPASy Swiss-Prot
Match: GME1_ORYSI (GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp. indica GN=OsI_032456 PE=2 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 1.824e-110
Identity = 199/230 (86.52%), Postives = 205/230 (89.13%), Query Frame = 3
Query:   87 MGSTE--GT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLCSXELCKHYTKDFGIECRVGRSTNIMGPFEHGK-VEGKSSCCFCRKALTS 764
            MGS+E  GT YG YTY ELERE YWPSEKLRIS+TGAGGFI SHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT  VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKL + ELCKHYTKDFGIECRVGR  NI GPF   K    K+   FCRKA TS
Sbjct:    1 MGSSEKNGTAYGEYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTNSVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKAQTS 230          
BLAST of EY659755 vs. ExPASy Swiss-Prot
Match: GME2_ORYSJ (GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp. japonica GN=GME-2 PE=2 SV=2)

HSP 1 Score: 392.119 bits (1006), Expect = 2.230e-108
Identity = 191/217 (88.02%), Postives = 198/217 (91.24%), Query Frame = 3
Query:  117 YTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLCSXELCKHYTKDFGIECRVGRSTNIMGPFEHGK-VEGKSSCCFCRKALTS 764
            YTY ELE+EPYWP EKLRIS+TGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA+RI+GVKRFFYASSACIYPEFKQL+T VSLKESDAWPAEPQDAYGLEKL + ELCKHYTKDFGIECRVGR  NI GPF   K    K+   FCRKALTS
Sbjct:    7 YTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGGREKAPAAFCRKALTS 223          
BLAST of EY659755 vs. ExPASy Swiss-Prot
Match: GME_ARATH (GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana GN=At5g28840 PE=1 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 4.967e-108
Identity = 191/229 (83.41%), Postives = 205/229 (89.52%), Query Frame = 3
Query:   87 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLE-TNVSLKESDAWPAEPQDAYGLEKLCSXELCKHYTKDFGIECRVGRSTNIMGPFEHGK-VEGKSSCCFCRKALTS 764
            MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWKKNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM+EA+RI+G+KRFFYASSACIYPEFKQLE TNVSLKESDAWPAEPQDAYGLEKL + ELCKHY KDFGIECR+GR  NI GPF   K    K+   FCRKA TS
Sbjct:    1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTS 229          
BLAST of EY659755 vs. ExPASy Swiss-Prot
Match: FCL_ECOLI (GDP-L-fucose synthetase OS=Escherichia coli (strain K12) GN=fcl PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.486e-11
Identity = 44/184 (23.91%), Postives = 84/184 (45.65%), Query Frame = 3
Query:  162 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF-KQLETNVSLKESDAWPAEPQDAYGLEKLCSXELCKHYTKDFGIECRVGRSTNIMGPFEH 710
            K R+ + G  G + S I R+L+  G   +    +   ++ +    H+F              ++ +D V+  AA +GG+    +  +  +Y N MI  N++ A+  + V +  +  S+CIYP+  KQ      L +    P    + Y + K+   +LC+ Y + +G + R    TN+ GP ++
Sbjct:    3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFF------------ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPT--NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDN 172          
The following BLAST results are available for this feature:
BLAST of EY659755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GME1_ORYSJ3.675e-11186.96GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp.... [more]
GME1_ORYSI1.824e-11086.52GDP-mannose 3,5-epimerase 1 OS=Oryza sativa subsp.... [more]
GME2_ORYSJ2.230e-10888.02GDP-mannose 3,5-epimerase 2 OS=Oryza sativa subsp.... [more]
GME_ARATH4.967e-10883.41GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana ... [more]
FCL_ECOLI1.486e-1123.91GDP-L-fucose synthetase OS=Escherichia coli (strai... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659755 ID=EY659755; Name=EY659755; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGTCCAAAGCCAGCCATTCTCCTCCTCCTTTATCTTCTCCT
CTTCATTAAACTCTCAAAGTTCAGGTGTTTTTCAGAATGGGAAGTACTGA
AGGAACCTATGGTGCATACACCTATGAGGAGCTTGAGAGGGAACCTTACT
GGCCTTCCGAGAAGCTCCGAATTTCTGTCACTGGGGCAGGTGGTTTTATT
GCCTCCCACATTGCTCGGCGTCTGAAGAGTGAAGGCCATTACATTATTGC
TTCTGACTGGAAGAAGAATGAGCACATGACTGAGGATATGTTCTGTCATG
AATTCCACCTTGTTGACCTTAGGGTCATGGACAATTGCTTGAAAGTTACT
AAGGGGGTTGACCATGTGTTTAACCTTGCTGCTGATATGGGTGGTATGGG
CTTTATTCAGTCCAACCACTCTGTCATCATGTATAACAATACCATGATCA
GCTTCAACATGCTTGAGGCTTCTAGGATCAGTGGAGTAAAGAGGTTTTTC
TATGCCTCTAGTGCCTGCATCTATCCCGAATTTAAGCAGCTGGAAACTAA
CGTAAGCTTGAAGGAGTCTGATGCCTGGCCCGCTGAGCCTCAAGATGCTT
ATGGCTTGGAGAAGCTTTGCAGTGANGAGTTGTGTAAGCACTACACGAAA
GACTTTGGAATTGAGTGTCGTGTTGGAAGATCCACNAATATTATGGGCCC
TTTTGAACATGGGAAGGTGGAAGGGAAAAGCTCCTGCTGCTTTTGCCGAA
AGGCTCTTACTTCACTGACAGTTTGAGATGGGGGGAGATGGACTTCAAAT
CCATCTTTCACCTCATTGATGAATGGGTGAAAATGACAANGCAGACTTCC
GTGAGCAANGAACATGGAAGGGATGAAATGGTACCATGAACAA
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