EY659743

Overview
NameEY659743
Unique NameEY659743
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659743_ssr228 microsatellite EY659743_ssr228:228..239. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7604 contig Csv1_Contig7604:59..981. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 314.694 bits (805), Expect = 4.704e-85
Identity = 151/225 (67.11%), Postives = 174/225 (77.33%), Query Frame = 3
Query:  165 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQVLDQQLC-LEPRYWWGANNYQA 830
            RPATF+EDFK  WS++H+RQ+E G+AIQLVLDQ++GCGFASKR+YLFGRVSMKIKL+PGDSAGTVTAFYMNS+T  VRDELDFEFLGNR+GQPY+VQTNI+A+GKGDREQRVNLWFDP+ DYH YTILW+H HIVFYVDDVPIR YKN  +    +P    MGVYSTLWEADDW  RGGLEK   +K  F    +   +    V     C   P  WW    YQ+
Sbjct:   31 RPATFVEDFKAAWSESHIRQMEDGKAIQLVLDQSTGCGFASKRKYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTATVRDELDFEFLGNRSGQPYSVQTNIFAHGKGDREQRVNLWFDPSMDYHTYTILWSHKHIVFYVDDVPIREYKNNEAKNIAYPTSQPMGVYSTLWEADDWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPTFCPSNPHNWWEGYAYQS 255          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 1.084e-81
Identity = 149/245 (60.82%), Postives = 178/245 (72.65%), Query Frame = 3
Query:  165 RPATFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKN--SGRAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQVLDQQLC-LEPRYWWGANNYQASPP*SKRIDG--SSHHMTYD 884
            RPA F +DF++ WSD H+ QI+GGRAIQL LD +SGCGFASK+QYLFGRVSMKIKL+PGDSAGTVTAFYMNS+T++VRDELDFEFLGNR+GQPYTVQTN++A+GKGDREQRVNLWFDP+ D+H Y I WNH  IVFYVD+VPIRVYKN  + + P+P    MGVYSTLWEADDW  RGG+EK   ++  F    +   +    V     C    + WW  + Y    P   R       +HM YD
Sbjct:   30 RPAKFEDDFRIAWSDTHITQIDGGRAIQLKLDPSSGCGFASKKQYLFGRVSMKIKLIPGDSAGTVTAFYMNSDTDSVRDELDFEFLGNRSGQPYTVQTNVFAHGKGDREQRVNLWFDPSRDFHEYAISWNHLRIVFYVDNVPIRVYKNNEARKVPYPRFQPMGVYSTLWEADDWATRGGIEKINWSRAPFYAYYKDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYD 274          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 7.828e-61
Identity = 103/178 (57.87%), Postives = 131/178 (73.60%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            F ++++ +W+  H++ + GG  + LVLD++SG GF SK+ YLFG  SMK+KLV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN   IV +VDDVPIR +KNS      FP    M +YS+LW+ADDW  RGGLEK
Sbjct:   32 FWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEK 208          

HSP 2 Score: 29.261 bits (64), Expect = 7.828e-61
Identity = 12/27 (44.44%), Postives = 16/27 (59.26%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGCPSSGPATV 787
            D S APF A Y  F ++GC ++ P  V
Sbjct:  210 DWSNAPFTASYTSFHVDGCEAATPQEV 236          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 5.015e-60
Identity = 103/187 (55.08%), Postives = 132/187 (70.59%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFM 731
            F +++  TW+  H+  + GGR +QL LD+ +G GF ++  YLFG  SM IKLV GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN+++ GKGDREQR+ LWFDP  DYH Y++LWN + I F+VDD PIRV+KNS      +P    M +YS+LW ADDW  RGG EK   +K  F+
Sbjct:   32 FDKNYVPTWAQDHIHYVNGGREVQLSLDKTTGTGFQTRGSYLFGHFSMHIKLVGGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFSGGKGDREQRIYLWFDPTKDYHSYSVLWNLYMIAFFVDDTPIRVFKNSKDLGVRYPFDQPMKLYSSLWNADDWATRGGREKTDWSKAPFV 217          

HSP 2 Score: 34.6538 bits (78), Expect = 5.015e-60
Identity = 16/31 (51.61%), Postives = 19/31 (61.29%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGCPSSGPATVPRTQ 799
            D SKAPF A YR F ++GC +S  A    TQ
Sbjct:  210 DWSKAPFVASYRGFHVDGCEASAEAKFCATQ 240          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH8_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 8 OS=Arabidopsis thaliana GN=XTH8 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 5.460e-59
Identity = 103/183 (56.28%), Postives = 129/183 (70.49%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTEN--VRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGRAP----FPMKPXMGVYSTLWEADDWGNRGGLEK 704
            +F ++F + WS+ H    + G    L LD ++GCGF +K  Y FG  SMK+KLV GDSAG VTA+YM S       RDE+DFEFLGNRTGQPY +QTN+Y NG G+RE R +LWFDP  DYH Y+ILWN+H +VF+VD VPIRVYKNS + P    FP +  M ++S++W ADDW  RGGLEK
Sbjct:   24 SFEDNFNIMWSENHFTTSDDGEIWNLSLDNDTGCGFQTKHMYRFGWFSMKLKLVGGDSAGVVTAYYMCSENGAGPERDEIDFEFLGNRTGQPYIIQTNVYKNGTGNREMRHSLWFDPTKDYHTYSILWNNHQLVFFVDRVPIRVYKNSDKVPNNDFFPNQKPMYLFSSIWNADDWATRGGLEK 206          

HSP 2 Score: 30.4166 bits (67), Expect = 5.460e-59
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGCPSSGP 778
            D  KAPF + Y+DF +EGC    P
Sbjct:  208 DWKKAPFVSSYKDFAVEGCRWKDP 231          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTHA_PHAAN (Xyloglucan endotransglucosylase/hydrolase protein A OS=Phaseolus angularis GN=XTHA PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.290e-58
Identity = 112/215 (52.09%), Postives = 144/215 (66.98%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQV-LDQQLC-LEPRYWW 809
            F  ++  TW+  H++ + GG  IQL LD+ +G GF SK  YLFG  SM IKLVPGDSAGTVTAFY++S T    DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP   YH Y++LWN + IVFYVDD PIRV+KNS      FP    M +Y++LW ADDW  RGGLEK   +K  F+   +   +   +  ++ + C  + + WW
Sbjct:   31 FGRNYVPTWAFDHIKYLNGGSEIQLHLDKYTGTGFQSKGSYLFGHFSMYIKLVPGDSAGTVTAFYLSS-TNAEHDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTTQYHRYSVLWNMYQIVFYVDDYPIRVFKNSNDLGVKFPFNQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIASYKGFHIDGCEASVNAKFCDTQGKRWW 244          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 2.200e-58
Identity = 110/221 (49.77%), Postives = 145/221 (65.61%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQV-LDQQLC-LEPRYWWGANNYQ 827
            F  ++  TW+  H++ + GG  + LVLD+ +G GF SK  YLFG  SM IK+V GDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  G G+REQR+NLWFDP+ DYH Y++LWN + IVF+VDDVPIRV+KNS      FP    M +YS+LW ADDW  RGGLEK    K  F+       +   +  ++ + C  + + WW    +Q
Sbjct:   32 FGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSE-HDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQ 251          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 213.001 bits (541), Expect = 1.318e-57
Identity = 96/179 (53.63%), Postives = 127/179 (70.95%), Query Frame = 3
Query:  174 TFLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSGR--APFPMKPXMGVYSTLWEADDWGNRGGLEK 704
            TF  +F +TW D   + +  G  + L LD+ SG GF +K++YLFG++ M++KLVPG+SAGTVTA+Y+ S  +   DE+DFEFLGN TG PYT+ TN+Y  GKGDREQ+ +LWFDP AD+H Y++LWN HHIVF VDD+P+R +KN       +P    M +YS+LW AD W  RGGL K
Sbjct:   29 TFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTW-DEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVK 206          

HSP 2 Score: 32.3426 bits (72), Expect = 1.318e-57
Identity = 18/34 (52.94%), Postives = 20/34 (58.82%), Query Frame = 2
Query:  707 DGSKAPFYAYYRDFDIEGCPSSG-----PATVPR 793
            D SKAPF A YR+F  + C SSG     PA  PR
Sbjct:  208 DWSKAPFTASYRNFRADACVSSGGRSSCPAGSPR 241          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH_SOYBN (Probable xyloglucan endotransglucosylase/hydrolase (Fragment) OS=Glycine max GN=XTH PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.433e-57
Identity = 110/215 (51.16%), Postives = 144/215 (66.98%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLILRAAQV-LDQQLC-LEPRYWW 809
            F  ++  TW+  H++   GG  IQL LD+ +G GF SK  YLFG  SM IK+VPGDSAGTVTAFY++S      DE+DFEFLGNRTGQPY +QTN++  GKGDREQR+ LWFDP  +YH Y+ILWN + IVF+VD+VPIRV+KNS      FP    M +Y++LW ADDW  RGGLEK   +K  F+   +   +   +  ++ + C  + + WW
Sbjct:   33 FGRNYVPTWAFDHIKYFNGGSDIQLHLDKYTGTGFQSKGSYLFGHFSMYIKMVPGDSAGTVTAFYLSSQNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGDREQRIYLWFDPTKEYHRYSILWNLYQIVFFVDEVPIRVFKNSKDLGVKFPFDQPMKIYNSLWNADDWATRGGLEKTDWSKAPFIAAYKGFHIDGCEASVNAKFCDTQGKRWW 246          
BLAST of EY659743 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 3.177e-57
Identity = 109/223 (48.88%), Postives = 146/223 (65.47%), Query Frame = 3
Query:  177 FLEDFKVTWSDAHLRQIEGGRAIQLVLDQNSGCGFASKRQYLFGRVSMKIKLVPGDSAGTVTAFYMNSNTENVRDELDFEFLGNRTGQPYTVQTNIYANGKGDREQRVNLWFDPAADYHLYTILWNHHHIVFYVDDVPIRVYKNSG--RAPFPMKPXMGVYSTLWEADDWGNRGGLEK*MXAKLLFMLITETLIL---RAAQVLDQQLC-LEPRYWWGANNYQ 827
            F ++++ +W+  H++ + GG    L+LD++SG GF SK+ YLFG  SMK++LV GDSAG VTAFY++SN     DE+DFEFLGNRTGQPY +QTN++  GKG+REQR+ LWFDP   YH Y++LWN + IV +VDDVPIR +KNS      FP    M +YS+LW+ADDW  RGGLEK   A   F     +  +    AA   + Q+C  +   WW    +Q
Sbjct:   33 FWKNYEPSWASHHIKFLNGGTTTDLILDRSSGAGFQSKKSYLFGHFSMKMRLVGGDSAGVVTAFYLSSNNAE-HDEIDFEFLGNRTGQPYILQTNVFTGGKGNREQRIYLWFDPTKGYHSYSVLWNTYLIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDADDWATRGGLEKTNWANAPFTASYTSFHVDGCEAATPQEVQVCNTKGMKWWDQKAFQ 254          
The following BLAST results are available for this feature:
BLAST of EY659743 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
XTH6_ARATH4.704e-8567.11Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH1.084e-8160.82Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC7.828e-6157.87Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_WHEAT5.015e-6055.08Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH8_ARATH5.460e-5956.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTHA_PHAAN1.290e-5852.09Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH5_ARATH2.200e-5849.77Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH1.318e-5753.63Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_SOYBN2.433e-5751.16Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC3.177e-5748.88Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-F02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659743 ID=EY659743; Name=EY659743; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGTAACCACAACTTATCAATTAAAGTTCTCTTTCTAATTAG
TAACAGATAATATTTTATTGTACGGCTTGTTTTACAGCTATGGCTATCCT
AAGAAATGCAATAGCATTATTTGTGTTGCTTTACTGTCTTGTATCCTGCT
CTTGCGTTTTAGGGCGACCGGCTACTTTTCTTGAGGATTTTAAAGTCACA
TGGTCCGATGCCCATCTCAGGCAAATCGAGGGAGGGAGGGCCATCCAGCT
AGTTCTAGACCAAAATTCAGGATGTGGGTTTGCTTCCAAAAGGCAGTACT
TGTTCGGGCGTGTAAGCATGAAGATCAAGCTCGTTCCTGGAGACTCTGCT
GGAACTGTCACTGCATTTTATATGAATTCCAACACCGAAAATGTGAGAGA
CGAGCTTGATTTTGAGTTCCTGGGAAACCGAACGGGTCAGCCTTACACGG
TCCAGACCAATATCTATGCAAATGGAAAAGGCGATAGAGAACAGAGAGTG
AACCTCTGGTTTGACCCTGCTGCAGATTATCACCTTTACACTATTCTCTG
GAACCATCACCATATTGTCTTCTATGTGGATGATGTGCCCATCAGGGTTT
ACAAAAACAGTGGAAGGGCTCCATTTCCAATGAAACCANCCATGGGGGTG
TATTCGACGCTGTGGGAAGCAGATGACTGGGGCAACAGAGGTGGTCTAGA
GAAATAGATGGNAGCAAAGCTCCTTTTTATGCTTATTACAGAGACTTTGA
TATTGAGGGCTGCCCAAGTTCTGGACCAGCAACTGTGCCTCGAACCCAGG
TACTGGTGGGGAGCAAATAATTATCAAGCCTCACCGCCATGAAGCAAAAG
AATCGATGGGTCGTCTCACCACATGACTTATGATATTGACTGATAATCAA
GACCCAGAACCCCCCCGTAT
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