EY659729

Overview
NameEY659729
Unique NameEY659729
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length587
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7499 contig Csv1_Contig7499:1..587. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.665e-37
Identity = 75/112 (66.96%), Postives = 89/112 (79.46%), Query Frame = 3
Query:   51 EVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNGVVESQPL 386
            EV+ AGV  TASGMAKSVY+KYEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLF            +CSEKYN TVV AAEKGY+V+SY+PLVPTERI+K+F+    E++PL
Sbjct:  129 EVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240          
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.845e-28
Identity = 63/105 (60.00%), Postives = 74/105 (70.48%), Query Frame = 3
Query:   51 EVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNG 365
            EV+  GV  TA  + K+VY+K EP AKEL SKYEP AEQYAVSAWR LN++PLF            Y SEKYNQ+V   AE+GY V+ YLPL+PTERIAKVF +G
Sbjct:  127 EVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVFQDG 231          
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.757e-24
Identity = 53/78 (67.95%), Postives = 62/78 (79.49%), Query Frame = 3
Query:  126 AKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFS 359
            AK +YSKYEP AEQ AVSAWRKLNQ+PLF            YC+EKYN+ +VS+AEKGY+VS+YLPLVPTE+IAKVFS
Sbjct:   88 AKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVPTEKIAKVFS 165          
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 5.380e-20
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   51 EVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASA 395
            EV+ AG+ GTA+G+AKS   + EP A++LY++YEP AE+ A  AW  LN++PL               S +YN  V   A++G  V++YLPLVPTER+++VF        PLA A
Sbjct:  131 EVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239          
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 5.380e-20
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   51 EVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSNGVVESQPLASA 395
            EV+ AG+ GTA+G+AKS   + EP A++LY++YEP AE+ A  AW  LN++PL               S +YN  V   A++G  V++YLPLVPTER+++VF        PLA A
Sbjct:  131 EVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF------GYPLADA 239          
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 5.035e-18
Identity = 47/92 (51.09%), Postives = 58/92 (63.04%), Query Frame = 3
Query:   90 MAKSVY-TKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKVFSN 362
            +A SV+ T  +  AK LY+  EPKAEQYAV  WR LN++PL             Y SEKYN  V    E+GY+VSSYLPL+PTE+I KVF +
Sbjct:  110 VASSVFNTGVQEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLPTEKITKVFGD 201          
BLAST of EY659729 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.421e-12
Identity = 39/101 (38.61%), Postives = 52/101 (51.49%), Query Frame = 3
Query:   51 EVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVPTERIAKV 353
            EV+  GV  T   +A+SV  KYEPAA           E YA + WR LNQ+PLF            Y SEKYN  V    ++ Y  + YLP++P E+I+ +
Sbjct:  137 EVQRTGVVDTTKSIARSVRDKYEPAA-----------EYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIPIEKISDI 226          
The following BLAST results are available for this feature:
BLAST of EY659729 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
Y3550_ARATH1.665e-3766.96REF/SRPP-like protein At3g05500 OS=Arabidopsis tha... [more]
SRP_VITRI1.845e-2860.00Stress-related protein OS=Vitis riparia GN=SRP PE=... [more]
SRP_PHAVU2.757e-2467.95Stress-related protein OS=Phaseolus vulgaris GN=SR... [more]
Y5513_ORYSJ5.380e-2043.48REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 ... [more]
Y5513_ORYSI5.380e-2043.48REF/SRPP-like protein OsI_017815 OS=Oryza sativa s... [more]
SRPP_HEVBR5.035e-1851.09Small rubber particle protein OS=Hevea brasiliensi... [more]
Y2778_ARATH2.421e-1238.61REF/SRPP-like protein At2g47780 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659729 ID=EY659729; Name=EY659729; organism=Citrus sinensis; type=EST; length=587bp
TTCGTCAACCCCGCGTCCGGGCTCCAGTTGTCGCACGATCCGTGGCTTCT
GAAGTGAAGACTGCCGGTGTAGCCGGCACCGCCTCAGGAATGGCAAAATC
CGTTTACACCAAGTACGAGCCCGCAGCCAAGGAACTTTACTCCAAGTACG
AACCAAAAGCGGAGCAATATGCTGTGTCAGCTTGGCGCAAGCTCAATCAG
ATGCCACTATTCCCTCAAGTAGCTCAAGTTGTTGTGCCAACTGCTGCCTA
TTGTTCTGAAAAATACAACCAAACAGTGGTGAGCGCTGCAGAGAAGGGGT
ACAAGGTCTCCTCATATTTGCCTTTGGTCCCTACTGAGAGGATTGCTAAG
GTGTTCAGCAACGGGGTTGTTGAATCGCAGCCTCTGGCTTCTGCTGGACA
TGAAGCTGATGTTGCTGTGTATTGATAGCTGTGTTTTCTGTTTTCTGGCC
TCGTGATTTTTCTTGCAAGCTGTGGAGTGAAAATGTTTTCCTTTCTGGAT
ATGTGTATTGGGTTGAAAATGGAGTGGATTACGATTATTTAATTTTTAAA
GACATTGCTTAAAAAAAAAAAAAAAAAAAAAAAAAAA
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