EY659725

Overview
NameEY659725
Unique NameEY659725
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length632
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.879e-26
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWGK 240
            RSKSNQYPNTSL+ IEGVNT+EEV+ Y GKRMAYIY+AK KKNG HY CIWGK
Sbjct:   23 RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGK 75          

HSP 2 Score: 45.8246 bits (107), Expect = 1.879e-26
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLPP 302
            G+V RPHGNSGVVRAKF SNLPP
Sbjct:   74 GKVTRPHGNSGVVRAKFTSNLPP 96          
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.879e-26
Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWGK 240
            RSKSNQYPNTSL+ +EGVNT EEVS Y GKRMAYIY+AK KKNG HY CIWGK
Sbjct:   23 RSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGK 75          

HSP 2 Score: 45.8246 bits (107), Expect = 1.879e-26
Identity = 20/23 (86.96%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLPP 302
            G+V RPHGNSGVVRAKF SNLPP
Sbjct:   74 GKVTRPHGNSGVVRAKFTSNLPP 96          
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 7.027e-26
Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWGK 240
            RSKSNQYPNTSLI IEGVNT+EEV+ Y GKR+AYIY+AK KKNG HY CIWGK
Sbjct:   22 RSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGK 74          

HSP 2 Score: 44.669 bits (104), Expect = 7.027e-26
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLPP 302
            G+V RPHGNSGVVR+KF SNLPP
Sbjct:   73 GKVTRPHGNSGVVRSKFTSNLPP 95          
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.148e-26
Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWGK 240
            RSKSNQYPNTSL+ IEGVNT+EEV+ Y GKR+AYIY+AK KKNG HY CIWGK
Sbjct:   22 RSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGK 74          

HSP 2 Score: 44.669 bits (104), Expect = 9.148e-26
Identity = 19/23 (82.61%), Postives = 21/23 (91.30%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLPP 302
            G+V RPHGNSGVVR+KF SNLPP
Sbjct:   73 GKVTRPHGNSGVVRSKFTSNLPP 95          
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 1.007e-11
Identity = 26/53 (49.06%), Postives = 32/53 (60.38%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWGK 240
            RSK    PN SLI IEGV T +E   Y GKR+AY+Y+A  +  G     +WGK
Sbjct:   18 RSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRVMWGK 70          

HSP 2 Score: 37.7354 bits (86), Expect = 1.007e-11
Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLP 299
            G+V R HGNSGVVRA F++NLP
Sbjct:   69 GKVTRTHGNSGVVRATFRNNLP 90          
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: RL33A_SCHPO (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe GN=rpl33a PE=2 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 1.700e-11
Identity = 22/52 (42.31%), Postives = 31/52 (59.62%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWG 237
            RSK   +P TSL+ IEG ++KEE   Y GKR+ ++Y++     G     IWG
Sbjct:   19 RSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWG 70          

HSP 2 Score: 41.9726 bits (97), Expect = 1.700e-11
Identity = 18/23 (78.26%), Postives = 19/23 (82.61%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLPP 302
            G V RPHGNSGVVRA+F  NLPP
Sbjct:   70 GTVSRPHGNSGVVRARFTHNLPP 92          
BLAST of EY659725 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3)

HSP 1 Score: 51.9878 bits (123), Expect = 2.208e-11
Identity = 25/53 (47.17%), Postives = 32/53 (60.38%), Query Frame = 1
Query:   82 RSKSNQYPNTSLIHIEGVNTKEEVS*YCGKRMAYIYQAKVKKNGLHYHCIWGK 240
            RSK    PN SLI IEGV T ++   Y GKR+AY+Y+A  +  G     +WGK
Sbjct:   18 RSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRVMWGK 70          

HSP 2 Score: 37.7354 bits (86), Expect = 2.208e-11
Identity = 16/22 (72.73%), Postives = 19/22 (86.36%), Query Frame = 3
Query:  234 GQVPRPHGNSGVVRAKFKSNLP 299
            G+V R HGNSGVVRA F++NLP
Sbjct:   69 GKVTRTHGNSGVVRATFRNNLP 90          
The following BLAST results are available for this feature:
BLAST of EY659725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
R35A3_ARATH1.879e-2681.1360S ribosomal protein L35a-3 OS=Arabidopsis thalia... [more]
R35A1_ARATH1.879e-2681.1360S ribosomal protein L35a-1 OS=Arabidopsis thalia... [more]
R35A2_ARATH7.027e-2681.1360S ribosomal protein L35a-2 OS=Arabidopsis thalia... [more]
R35A4_ARATH9.148e-2679.2560S ribosomal protein L35a-4 OS=Arabidopsis thalia... [more]
RL33B_YEAST1.007e-1149.0660S ribosomal protein L33-B OS=Saccharomyces cerev... [more]
RL33A_SCHPO1.700e-1142.3160S ribosomal protein L33-A OS=Schizosaccharomyces... [more]
RL33A_YEAST2.208e-1147.1760S ribosomal protein L33-A OS=Saccharomyces cerev... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-D07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659725 ID=EY659725; Name=EY659725; organism=Citrus sinensis; type=EST; length=632bp
CCACGCGTCCGGTCAGGGACCTAGGATAGCATCGGAAGAGCGAGGAATCT
TGAAATTCTTTTTAATGCTATTACAACTTTAAGGTCAAAGTCCAACCAGT
ACCCAAACACTTCATTGATCCATATTGAGGGAGTGAACACCAAGGAAGAG
GTGTCATAGTACTGTGGGAAGCGTATGGCTTACATTTACCAGGCTAAAGT
GAAGAAGAATGGATTGCACTATCATTGCATCTGGGGCAAGTTCCAAGGCC
TCATGGTAACAGTGGGGTTGTTCGTGCTAAATTCAAGTCCAATCTGCCTC
CAAGTCCATGGTATCTTAACCATGTCATTATTACTACTGTTATTAAATGG
TTCCCTTGTCTTCAGATTTGATTTTTGAGTTTTTTTTTTTAATGTCGTTC
AAGGAGACAGAGTTAGGGTCGTCATGTACCCCGGCAATATCTAAGGTCCT
CCAGCCCCTAGATGTCGGATTAAGGCTGTCGACAACTTGGAAGGAATCTC
TGCCTTTTTACTTGTGTTATAAGCTAGGTTTGAATTCATGTGTTATGGAG
CCGAATCATTTTTGTTTCATTAAGATGGTAAATGAGACATTATATTCACT
GAAACTGATGTCAGATCTTTTTGCTCCAAAAA
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