EY659720

Overview
NameEY659720
Unique NameEY659720
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659720 vs. ExPASy Swiss-Prot
Match: CHLG_ORYSJ (Chlorophyll synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CHLG PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.256e-38
Identity = 62/98 (63.27%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  511 TINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDXPTIFWLAXGGSLLSYNTLLHFGAEAK-----WMDXNFALGAS 789
            TINDWYDR+IDAINEPYRPIPSGAISENEVITQIW             DVWAGHD P IF+LA GGSLLSY   ++     K     W+  NFALGAS
Sbjct:  142 TINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSY---IYSAPPLKLKQNGWI-GNFALGAS 235          

HSP 2 Score: 65.4698 bits (158), Expect = 2.256e-38
Identity = 27/31 (87.10%), Postives = 29/31 (93.55%), Query Frame = 2
Query:  359 GNFHWNLEDVAKSIVCMIMSGPCLTGYTQVV 451
            GNFHW +EDVAKSIVCMIMSGPCLTGYTQ +
Sbjct:  113 GNFHWTVEDVAKSIVCMIMSGPCLTGYTQTI 143          
BLAST of EY659720 vs. ExPASy Swiss-Prot
Match: CHLG_AVESA (Chlorophyll synthase, chloroplastic OS=Avena sativa GN=CHLG PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 4.987e-38
Identity = 62/98 (63.27%), Postives = 68/98 (69.39%), Query Frame = 1
Query:  511 TINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDXPTIFWLAXGGSLLSYNTLLHFGAEAK-----WMDXNFALGAS 789
            TINDWYDR+IDAINEPYRPIPSGAISENEVITQIWV            D+WAGHD P IF+LA GGSLLSY   ++     K     W+  NFALGAS
Sbjct:  144 TINDWYDRDIDAINEPYRPIPSGAISENEVITQIWVLLLGGLGLGALLDIWAGHDFPIIFYLALGGSLLSY---IYSAPPLKLKQNGWI-GNFALGAS 237          

HSP 2 Score: 63.1586 bits (152), Expect = 4.987e-38
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 2
Query:  359 GNFHWNLEDVAKSIVCMIMSGPCLTGYTQVV 451
            GNFHW +EDV KSIVCM+MSGPCLTGYTQ +
Sbjct:  115 GNFHWTVEDVTKSIVCMLMSGPCLTGYTQTI 145          
BLAST of EY659720 vs. ExPASy Swiss-Prot
Match: CHLG_ARATH (Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.021e-36
Identity = 60/98 (61.22%), Postives = 67/98 (68.37%), Query Frame = 1
Query:  511 TINDWYDREIDAINEPYRPIPSGAISENEVITQIWVXXXXXXXXXXXXDVWAGHDXPTIFWLAXGGSLLSYNTLLHFGAEAK-----WMDXNFALGAS 789
            TINDWYDR+IDAINEPYRPIPSGAISE EVITQ+WV            DVWAGH  PT+F+LA GGSLLSY   ++     K     W+  NFALGAS
Sbjct:  153 TINDWYDRDIDAINEPYRPIPSGAISEPEVITQVWVLLLGGLGIAGILDVWAGHTTPTVFYLALGGSLLSY---IYSAPPLKLKQNGWV-GNFALGAS 246          

HSP 2 Score: 61.6178 bits (148), Expect = 2.021e-36
Identity = 25/31 (80.65%), Postives = 28/31 (90.32%), Query Frame = 2
Query:  359 GNFHWNLEDVAKSIVCMIMSGPCLTGYTQVV 451
            GNFHW  EDVAKSI+CM+MSGPCLTGYTQ +
Sbjct:  124 GNFHWTPEDVAKSILCMMMSGPCLTGYTQTI 154          
The following BLAST results are available for this feature:
BLAST of EY659720 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
CHLG_ORYSJ2.256e-3863.27Chlorophyll synthase, chloroplastic OS=Oryza sativ... [more]
CHLG_AVESA4.987e-3863.27Chlorophyll synthase, chloroplastic OS=Avena sativ... [more]
CHLG_ARATH2.021e-3661.22Chlorophyll synthase, chloroplastic OS=Arabidopsis... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-D02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659720 ID=EY659720; Name=EY659720; organism=Citrus sinensis; type=EST; length=901bp
ATTTAAATACCTCTTCCTTCTTGCTAAAGCTGTTTTGATGGACATTTCAT
ATGTCAACTTCTGGCACTTGTGCTGATATATGGATGCTTAGAGCCTTAGA
GATTTTTACCTCATATTGACATTTAGTGTACAGTGAAAGCTTCTCCATAT
TTTGTATCATCTTCTCGATATGTCCTTATGAAGTGACATTTATCCTAGAG
TAACAGTTTACACTATGAATAGACAACCTACTGGGTAGTGAACTTAATTA
ATCTGCTTAACTTATTAGTGATAAACTGTAATTTTATGGAGAATATACTG
TATTTTACTTTCCCCTGGTCTTGTTAGTTGCTTTCGAGTTGATTTGATTC
ACATTGTAGGAAACTTTCACTGGAATTTGGAGGATGTTGCTAAATCAATT
GTCTGTATGATCATGTCTGGCCCGTGTCTCACTGGCTACACACAGGTAGT
TCTATATTGAATGAGAACTTGACACTATGATAACCTAATTTCTTGCTTTT
GACTTCATAGACGATTAATGATTGGTATGATCGAGAGATTGATGCAATTA
ATGAACCCTATCGTCCAATTCCTTCAGGTGCAATATCTGAGAATGAGGTC
ATTACCCAGATCTGGGTTTTACTGCTAGCAGGCCTTGGATTAGCTGGNTT
ATTAGACGTGTGGGCAGGCCATGACTTNCCAACGATATTTTGGCTTGCTG
NGGGTGGATCCTTGCTATCATACAATACTCTGCTCCACTTTGGAGCTGAA
GCAAAATGGATGGATGNAAATTTTGCTCTGGGAGCAAGCTTATAAGTTGC
CATGGGGGGCAGCCAACTTTTGTTGGACCCTACCCTGAATAATAGTCTCC
CCCCTGGACACTTGCTGGGTAGGATTGCATGGAAAGACTTAAAAAGGTGA
A
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