EY659719

Overview
NameEY659719
Unique NameEY659719
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10642 contig Csv1_Contig10642:724..1402. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY659719 vs. ExPASy Swiss-Prot
Match: MUG70_SCHPO (Meiotically up-regulated gene 70 protein OS=Schizosaccharomyces pombe GN=mug70 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.354e-17
Identity = 51/201 (25.37%), Postives = 101/201 (50.25%), Query Frame = 2 
Query:   20 ENGEVIAILDITKCLYDAISRMEKAAEQGSAIAAAVEGVERQW----------GSNFSAPYA-----FIETLRERMFKPSLSTIITENAKVAIVSPSDPVAVAAKKMREFRSNSALIVTGSKIQGILTSKDVLMRVVAQNLSPELTLVEKVMTSSPECATMETTILDALHIMHDGKFLHLPVIDKDGGVAACLDVLQITHA 577
            + G+VI I+++  CL + ++R+ +  E    +  A+EG + +            S+ S  +A     ++E+L+++     + ++I  + +  +V     VA A + M     ++ L++    + G+ T+ DV++RV+A  L P  + V +VMT  P+CA     +  AL  M +GKF +LPV+D+   +   L +  +  A
Sbjct:  177 DEGDVIGIINMRACLREPLNRIARQQEAAQKLVEALEGAQEEIENKSVSGNTNSSSVSGNHAAEFLEYVESLKKKASGLEIMSLIDSSEEPFLVGTRTTVAEATESMARSGVSAVLVMDNGAVSGVFTAHDVVLRVLAAGLDPYRSSVIRVMTPHPDCALASLRVSTALERMIEGKFSNLPVVDESDAIIGMLSLFHLATA 377
The following BLAST results are available for this feature:
BLAST of EY659719 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MUG70_SCHPO4.354e-1725.37Meiotically up-regulated gene 70 protein OS=Schizo... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C1-101-014-D01-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659719 ID=EY659719; Name=EY659719; organism=Citrus sinensis; type=EST; length=679bp
CCACGCGTCCGCTGTTGTAGAGAATGGTGAAGTTATTGCCATTTTGGATA
TCACAAAGTGCCTTTATGATGCCATATCAAGAATGGAGAAGGCTGCTGAA
CAGGGGAGTGCTATTGCTGCGGCAGTTGAAGGGGTGGAACGCCAGTGGGG
AAGCAATTTTTCGGCTCCATATGCATTCATTGAAACATTGAGGGAGCGGA
TGTTCAAGCCGTCCTTGTCAACTATTATCACTGAAAATGCCAAGGTTGCC
ATTGTATCTCCATCAGACCCTGTAGCTGTTGCTGCAAAAAAGATGCGGGA
ATTTAGAAGTAATTCAGCTCTCATTGTGACAGGAAGCAAAATTCAGGGAA
TACTAACTTCAAAAGATGTCCTTATGCGAGTTGTGGCACAAAATCTTTCT
CCTGAGTTGACTCTGGTGGAAAAGGTAATGACGTCGAGCCCTGAATGTGC
AACAATGGAAACAACAATCCTTGATGCATTGCATATAATGCATGATGGGA
AGTTTTTACATCTTCCAGTGATAGACAAAGATGGAGGAGTTGCTGCTTGT
TTAGATGTTCTTCAGATAACTCATGCTGCCATCTCTATGGTTGAAAGTGG
NTCTGGAGCTGNTAATGATATGGCAAACACAATGATGCAAAAAGTCTGGG
GATCAGCTCTTTGCGTAGAGCCACCAGAA
back to top