EY659678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659678 vs. ExPASy Swiss-Prot
Match: CTR9_MOUSE (RNA polymerase-associated protein CTR9 homolog OS=Mus musculus GN=Ctr9 PE=1 SV=2) HSP 1 Score: 120.939 bits (302), Expect = 8.671e-27 Identity = 59/146 (40.41%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 353 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYXNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLGSLNT 790 + L R + E H ++A +Y +V+ NLYAANG G VLA KG F ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY NCLRKFY + + +++LYLAR ++ + Q+CK++LL+A H+ +T Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDT 751
BLAST of EY659678 vs. ExPASy Swiss-Prot
Match: CTR9_HUMAN (RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens GN=CTR9 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.671e-27 Identity = 59/146 (40.41%), Postives = 91/146 (62.33%), Query Frame = 2 Query: 353 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYXNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLGSLNT 790 + L R + E H ++A +Y +V+ NLYAANG G VLA KG F ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY NCLRKFY + + +++LYLAR ++ + Q+CK++LL+A H+ +T Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHKGYFREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVVLYLARALFKCGKLQECKQTLLKARHVAPSDT 751
BLAST of EY659678 vs. ExPASy Swiss-Prot
Match: CTR9_XENTR (RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis GN=ctr9 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.620e-26 Identity = 59/146 (40.41%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 353 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYXNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLGSLNT 790 + L R + E H ++A +Y +V+ + NLYAANG G VLA KG ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY NCLRKFY + + ++LLYLAR ++ + Q+CK+ LL+A H+ +T Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQILLKARHVAPNDT 751
BLAST of EY659678 vs. ExPASy Swiss-Prot
Match: CTR9_XENLA (RNA polymerase-associated protein CTR9 homolog OS=Xenopus laevis GN=ctr9 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.635e-25 Identity = 58/146 (39.73%), Postives = 90/146 (61.64%), Query Frame = 2 Query: 353 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYXNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSLLRAIHLGSLNT 790 + L R + E H ++A +Y +V+ + NL+AANG G VLA KG ++D+F QV+EA + + DVW+NLAH+Y Q + A++MY NCLRKFY + + ++LLYLAR ++ + Q+CK+ LL+A H+ +T Sbjct: 611 WLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLFAANGIGAVLAHKGYVREARDVFAQVREATA-----DISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVLLYLARALFKCGKLQECKQILLKARHVAPNDT 751
BLAST of EY659678 vs. ExPASy Swiss-Prot
Match: YKD1_CAEEL (TPR repeat-containing protein B0464.2 OS=Caenorhabditis elegans GN=B0464.2 PE=2 SV=3) HSP 1 Score: 89.7373 bits (221), Expect = 2.141e-17 Identity = 44/135 (32.59%), Postives = 80/135 (59.26%), Query Frame = 2 Query: 353 YFAALRNEKRAPKLEATHLEKAKELYTRVIVQHTSNLYAANGAGVVLAEKGQFDVSKDLFTQVQEAASGSVFVQMPDVWINLAHVYFAQGNFALAMKMYXNCLRKFYYNTDAQILLYLARTHYEAEQWQDCKKSL 757 +F L N R + E ++++A ++Y + + N+YAANG G VLA K ++ ++D+F+QV+E+ S + DVW+N+AHV + + A++MY + ++KF D+ + YLA+ +Y A + K++L Sbjct: 642 WFEQLLNPSRKKEDEKKYIDRALQMYQKALKLQPKNMYAANGIGCVLAYKRNWNDARDVFSQVRESTS-----EFYDVWLNIAHVCMEREQWMAAVQMYSSAMKKFRKENDSTLQHYLAKAYYRANMLNEAKEAL 771 The following BLAST results are available for this feature:
BLAST of EY659678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659678 ID=EY659678; Name=EY659678; organism=Citrus sinensis; type=EST; length=837bpback to top |