EY659611

Overview
NameEY659611
Unique NameEY659611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length934
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY659611 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.931e-12
Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = 3 
Query:  117 PLSLKDGGEAESYSGKIHKCLSMPASXXXXXXXXXXXXXXXARIDNVRKTVLDHASNLATMGIGAQVFDKPTHPNSATGDDWLDSEETRNKH 392
            PL+LKD GE+          ++MP +               AR DNV ++V    SNL++  +G QVFD P  PNS T  DW+ S ETR+KH
Sbjct:   30 PLNLKDEGESSK--------ITMPTTPTTPVTPTTPIS---ARKDNVWRSVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKH 109

HSP 2 Score: 39.6614 bits (91), Expect = 2.931e-12
Identity = 16/20 (80.00%), Postives = 17/20 (85.00%), Query Frame = 2 
Query:   41 KLWDDIVGGPHPDRGLGRLR 100
            KLWDDIV GP P+RGLG LR
Sbjct:    6 KLWDDIVAGPQPERGLGMLR 25
The following BLAST results are available for this feature:
BLAST of EY659611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN2.931e-1239.13Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659611 ID=EY659611; Name=EY659611; organism=Citrus sinensis; type=EST; length=934bp
AAATATTCTCAGCTAAATTGTAAATTTAAATACGCGACAGAAGCTTTGGG
ACGATATAGTGGGAGGGCCTCATCCTGATCGCGGCCTTGGCAGGCTGAGG
TAAAATCACCACAACACCCTTATCACTCAAAGATGGTGGAGAGGCGGAGT
CGTACTCAGGCAAGATCCATAAGTGTCTGTCAATGCCAGCGAGTCCAAAG
GCACCGATTACTCCAGTGACGCCAACGACGCCGATGACAGCGCGTATTGA
CAACGTGCGGAAGACCGTGCTTGACCACGCTAGCAACCTAGCTACTATGG
GTATCGGTGCACAGGTCTTTGACAAGCCCACACATCCTAACTCTGCCACT
GGTGATGACTGGCTTGACAGTGAGGAGACTAGGAACAAGCATGATGACTG
TATGGATGATACACTCCAGCGATGTGCATGAATGTGATGGGCCACCAACT
CACCGGATGAGTAGCCTGTACGCTGCTTATAGAGGCAATTCCTTGGGAAT
TTCACAACGACGTCATGACGCTATAATAATGCTATTTGAATGACGAGTCC
TTGCTATCTAAAGGGGAGCATAAAATGCTGCTCACTAAAGTATACTAAGA
CTAGCTGGTATCATATCACACATCCTAACAATGTATGCGATGTGATGATC
GCAAACTGGAGCCCGAACTAAAAGGCCCTGGATTATGGGATCAAGACATG
CTTCTTATGGCCTTTAATAGATCAAAAATCTCCCTTTGTGACGGCTTTGA
GGACCCTTATGTGGATCATTAAAAATAAAGGGCTTTCATAAAAAAAAAAA
TAAAGGGGGGCGGCTTAGAGAACCAACCTTCGTGAACTGGCAAAAAAGAA
AAATCTCTTTAAAGGCCCTAAATAATTTACTGTCCGACTTTCCCACCCGT
GCTGGAAAAACCTGGGTTTCCACTCAATGCGGGG
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