EY659577

Overview
NameEY659577
Unique NameEY659577
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length945
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: XCT_ARATH (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis thaliana GN=XCT PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 3.298e-33
Identity = 91/211 (43.13%), Postives = 109/211 (51.66%), Query Frame = 2
Query:   41 EILETAFKKETVCLFTREEYVEKMVSIRSMIXXXXXXXXXXXXXXXXXXXXXXRIK-RKIKGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAHAKLG*DPTVETSFLPDSEIDAHEQSDXXXXXXXXXXXXXXIRNEPLQITYSSWDGAGHTRVIQVRDGDTIRELLRAVHNYWHLSFEKCDQRQWEIXSMIKKILSSLINTSYMSLLVTK 670
            EIL+TAFKKETV L TREEYVEK V+IR+                        R K RKIKG+SRLSFA+DF               T  L   KLG DP+VET+FLPDSE +A EQ++              I+NEPL+ITYS WDG GH RVIQVR GD I   LRAV       F +      E    +K+ L      S+  L++ K
Sbjct:   57 EILDTAFKKETVGLVTREEYVEKRVNIRNKFEEEEKEKLQKLQQEEEELQLEKRNKKRKIKGSSRLSFAEDFENGSDEDDGENKSSGTGNLRCGKLGKDPSVETNFLPDSEREAEEQAERERLKKQWLREQEQIKNEPLEITYSYWDGTGHRRVIQVRKGDPIGNFLRAVQQQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINK 267          

HSP 2 Score: 22.3274 bits (46), Expect = 3.298e-33
Identity = 8/10 (80.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:   10 GLLQFGSSTC 39
            GLLQFG+S+C
Sbjct:   47 GLLQFGTSSC 56          

HSP 3 Score: 112.464 bits (280), Expect = 3.714e-24
Identity = 57/77 (74.03%), Postives = 61/77 (79.22%), Query Frame = 1
Query:  550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGE 780
            Q LAP+FRE+R+ASV N LY KEDLIIPHQH  YELI NKARG SGPLFHFDVH DVRTIA   +EKDES  GK  E
Sbjct:  228 QQLAPDFREIRTASVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATIEKDESHAGKVVE 304          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: XCT_ORYSJ (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. japonica GN=XCT PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.236e-32
Identity = 87/211 (41.23%), Postives = 108/211 (51.18%), Query Frame = 2
Query:   38 AEILETAFKKETVCLFTREEYVEKMVSIRSMIXXXXXXXXXXXXXXXXXXXXXXRIKRKIKGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAHAKLG*DPTVETSFLPDSEIDAHEQSDXXXXXXXXXXXXXXIRNEPLQITYSSWDGAGHTRVIQVRDGDTIRELLRAVHNYWHLSFEKCDQRQWEIXSMIKKILSSLINTSYMSLLVTK 670
            +EILETAFKKETV L TRE+YVEK V+IR+ I                      R KR+++G+ RLSF D+               + K     KLG DPTVETSFLPD E +A EQ++              I+NEPL ITYS WDG GH RVIQVR GD+I E LRAV       F +      E    +K+ L      S+  L++ K
Sbjct:   54 SEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINK 263          

HSP 2 Score: 24.2534 bits (51), Expect = 1.236e-32
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:    7 PGLLQFGSST 36
            PGLLQFGSST
Sbjct:   44 PGLLQFGSST 53          

HSP 3 Score: 110.538 bits (275), Expect = 1.411e-23
Identity = 57/77 (74.03%), Postives = 59/77 (76.62%), Query Frame = 1
Query:  550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGE 780
            Q LAPEFRE+R+ SV N LY KEDLIIPHQH  YELI NKARG SGPLFHFDVH DVRTIA    EKDES  GK  E
Sbjct:  224 QQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVE 300          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: XCT_ORYSI (Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa subsp. indica GN=XCT PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.236e-32
Identity = 87/211 (41.23%), Postives = 108/211 (51.18%), Query Frame = 2
Query:   38 AEILETAFKKETVCLFTREEYVEKMVSIRSMIXXXXXXXXXXXXXXXXXXXXXXRIKRKIKGNSRLSFADDFXXXXXXXXXXXXXLKTKRLAHAKLG*DPTVETSFLPDSEIDAHEQSDXXXXXXXXXXXXXXIRNEPLQITYSSWDGAGHTRVIQVRDGDTIRELLRAVHNYWHLSFEKCDQRQWEIXSMIKKILSSLINTSYMSLLVTK 670
            +EILETAFKKETV L TRE+YVEK V+IR+ I                      R KR+++G+ RLSF D+               + K     KLG DPTVETSFLPD E +A EQ++              I+NEPL ITYS WDG GH RVIQVR GD+I E LRAV       F +      E    +K+ L      S+  L++ K
Sbjct:   54 SEILETAFKKETVGLVTREQYVEKRVNIRTKIEEEEKEKLQKLQQEEEELQMQKRKKRRVRGDPRLSFCDEIENGSDEDEFENQEPQKKH-GPVKLGKDPTVETSFLPDREREAEEQAERERLKKQWSREQELIKNEPLTITYSYWDGTGHRRVIQVRKGDSIGEFLRAVQQQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINK 263          

HSP 2 Score: 24.2534 bits (51), Expect = 1.236e-32
Identity = 10/10 (100.00%), Postives = 10/10 (100.00%), Query Frame = 1
Query:    7 PGLLQFGSST 36
            PGLLQFGSST
Sbjct:   44 PGLLQFGSST 53          

HSP 3 Score: 110.538 bits (275), Expect = 1.411e-23
Identity = 57/77 (74.03%), Postives = 59/77 (76.62%), Query Frame = 1
Query:  550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGKCGE 780
            Q LAPEFRE+R+ SV N LY KEDLIIPHQH  YELI NKARG SGPLFHFDVH DVRTIA    EKDES  GK  E
Sbjct:  224 QQLAPEFREVRTTSVENLLYVKEDLIIPHQHSFYELIINKARGKSGPLFHFDVHEDVRTIADATKEKDESHAGKVVE 300          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_MOUSE (Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 4.398e-17
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG     ++  G T         ++L  +F E+RSA V   +Y KEDLIIPH H  Y+ I  KARG SGPLF+FDVH+DVR ++   +EKDES  GK
Sbjct:  203 FSYWDGSGHRRTVKMKKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGK 305          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_HUMAN (Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 4.398e-17
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG     ++  G T         ++L  +F E+RSA V   +Y KEDLIIPH H  Y+ I  KARG SGPLF+FDVH+DVR ++   +EKDES  GK
Sbjct:  203 FSYWDGSGHRRTVKMRKGNTMQQFLQKALEILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDVRLLSDATVEKDESHAGK 305          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50B_MOUSE (Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.744e-17
Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG     R++ G T         Q L  +FRE+R+A V   +Y KEDLI+PH H  Y+ I  KARG SGPLF FDVH+DVR ++   +EKDES  GK
Sbjct:  198 FSYWDGSGHRRTVRMSKGSTVQQFLKRALQGLRRDFRELRAAGVEQLMYVKEDLILPHYHTFYDFIVAKARGKSGPLFSFDVHDDVRLLSDATMEKDESHAGK 300          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: F50AB_XENLA (Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.744e-17
Identity = 42/74 (56.76%), Postives = 53/74 (71.62%), Query Frame = 1
Query:  550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++L  +F E+RSA V   +Y KEDLIIPH H  Y+ I  KARG SGPLF+FDVH DVR ++  ++EKDES  GK
Sbjct:  236 EILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDASVEKDESHAGK 309          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_XENTR (Protein FAM50A OS=Xenopus tropicalis GN=fam50a PE=2 SV=2)

HSP 1 Score: 88.1965 bits (217), Expect = 7.502e-17
Identity = 42/74 (56.76%), Postives = 52/74 (70.27%), Query Frame = 1
Query:  550 QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++L  +F E+RSA V   +Y KEDLIIPH H  Y+ I  KARG SGPLF+FDVH DVR ++   +EKDES  GK
Sbjct:  243 EILRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEKDESHAGK 316          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: FA50A_DANRE (Protein FAM50A OS=Danio rerio GN=fam50a PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.798e-17
Identity = 46/103 (44.66%), Postives = 63/103 (61.17%), Query Frame = 1
Query:  490 YTSYPGSGR*YNKRVASGCT---------QLLAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            ++ + GSG     ++  G T         ++L  +F E+RSA V + +Y KEDLIIPH H  Y+ I  KARG SGPLF+FDVH+D+R +    +EKDES  GK
Sbjct:  205 FSYWDGSGHRKTVKMKKGNTIQQFLQRALEVLRKDFSELRSAGVEHLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHDDIRLVNDATVEKDESHAGK 307          
BLAST of EY659577 vs. ExPASy Swiss-Prot
Match: F50AA_XENLA (Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.183e-16
Identity = 42/72 (58.33%), Postives = 50/72 (69.44%), Query Frame = 1
Query:  556 LAPEFREMRSASVGNXLYDKEDLIIPHQHKLYELIGNKARGISGPLFHFDVHNDVRTIAWCALEKDESMLGK 771
            L  +F E+RSA V   +Y KEDLIIPH H  Y+ I  KARG SGPLF+FDVH DVR ++   +EKDES  GK
Sbjct:  235 LRKDFSELRSAGVEQLMYIKEDLIIPHHHSFYDFIVTKARGKSGPLFNFDVHEDVRLLSDATVEKDESHAGK 306          
The following BLAST results are available for this feature:
BLAST of EY659577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 17
Match NameE-valueIdentityDescription
XCT_ARATH3.298e-3343.13Protein XAP5 CIRCADIAN TIMEKEEPER OS=Arabidopsis t... [more]
XCT_ORYSJ1.236e-3241.23Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa ... [more]
XCT_ORYSI1.236e-3241.23Protein XAP5 CIRCADIAN TIMEKEEPER OS=Oryza sativa ... [more]
FA50A_MOUSE4.398e-1745.63Protein FAM50A OS=Mus musculus GN=Fam50a PE=2 SV=1[more]
FA50A_HUMAN4.398e-1745.63Protein FAM50A OS=Homo sapiens GN=FAM50A PE=1 SV=2[more]
FA50B_MOUSE5.744e-1746.60Protein FAM50B OS=Mus musculus GN=Fam50b PE=2 SV=1[more]
F50AB_XENLA5.744e-1756.76Protein FAM50A-B OS=Xenopus laevis GN=fam50a-B PE=... [more]
FA50A_XENTR7.502e-1756.76Protein FAM50A OS=Xenopus tropicalis GN=fam50a PE=... [more]
FA50A_DANRE9.798e-1744.66Protein FAM50A OS=Danio rerio GN=fam50a PE=2 SV=1[more]
F50AA_XENLA2.183e-1658.33Protein FAM50A-A OS=Xenopus laevis GN=fam50a-A PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-G02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659577 ID=EY659577; Name=EY659577; organism=Citrus sinensis; type=EST; length=945bp
GCCAGCCCTGGTCTCCTCCAGTTTGGTTCAAGTACCTGCCGAAATTCTAG
AAACTGCGTTTAAGAAGGAAACCGTATGTTTATTCACCAGAGAGGAATAC
GTTGAGAAGATGGTTAGTATTCGGAGCATGATTGAATAGGAAGATGAGGA
GAAGCTTCAGAAGCTACTACAAGAGGAATAGGAGCTGCAATTGGAAAAGC
GTATAAAGCGAAAGATTAAGGGAAATTCTCGATTATCATTTGCTGATGAT
TTTGAGAGTGAAAATGAATAGGAGAATGGAGAAAGTGAAAATTTGAAAAC
AAAGAGGCTTGCGCATGCGAAATTGGGATAAGATCCGACAGTGGAGACTA
GCTTTTTGCCTGACAGTGAGATAGATGCACATGAGCAATCTGATCGTGAA
CGGCTGCAGCGACTGTGGCTTCGTGAGCAGGAGCTTATTCGAAATGAACC
CCTTCAAATCACTTATAGTTCTTGGGATGGAGCAGGCCATACACGAGTTA
TCCAGGTTCGGGACGGTGATACAATAAGAGAGTTGCTTCGGGCTGTACAC
AACTACTGGCACCTGAGTTTCGAGAAATGCGATCAGCGTCAGTGGGAAAT
CNGCTCTATGATAAAGAAGATCTTATCATCCCTCATCAACACAAGTTATA
TGAGCTTATTGGTAACAAAGCCCGTGGAATAAGCGGACCGCTTTTTCACT
TTGATGTTCACAATGATGTACGGACCATTGCTTGGTGCGCTTTGGAAAAA
GATGAATCCATGCTGGGAAAGTGTGGAGAGGCCCTGGTTTTATAAAACCA
ACCTATTTTCCCTGGCTTTTGTGGGGGTTTCTGACCCACTAGAATGGGGG
CGGTCCCCTCCATGGGGTTGGTCCCCGGCTGGGCAATAAATTTTTTGAAC
AATTGTCTGTTACCGGAGGGCTTAATTGGACTTTTGGGCCTTTAA
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