EY659553

Overview
NameEY659553
Unique NameEY659553
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659553_ssr744 microsatellite EY659553_ssr744:744..759. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr268 microsatellite EY659553_ssr268:268..285. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr17 microsatellite EY659553_ssr17:17..28. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659553_ssr49 microsatellite EY659553_ssr49:49..60. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML44_ARATH (Probable calcium-binding protein CML44 OS=Arabidopsis thaliana GN=CML44 PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.554e-29
Identity = 74/163 (45.40%), Postives = 103/163 (63.19%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIG-VHFTLEELEALVEKPSLCFDEFL-FFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMML 555
            +T NDL+R+F+ LD+N DGLV+L+EL W+L+++G    T +ELE +V K SL  DEFL F+ D+++                           DE I+   +AF+VFDVNGDG+I++EEL+ VL RLG  +E  + DC  MI V+D N DG +DFEEFKNM+L
Sbjct:    6 ITTNDLRRMFKTLDKNQDGLVTLDELLWILDKLGWAEHTPDELELIVGKQSLDLDEFLRFYYDAVLDSKGSKKNIDVVA------------DNDEAIA---RAFNVFDVNGDGYISAEELRDVLERLGFEEEAKAWDCGRMIRVHDKNLDGFVDFEEFKNMIL 153          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML42_ARATH (Calcium-binding protein CML42 OS=Arabidopsis thaliana GN=CML42 PE=1 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.657e-21
Identity = 65/160 (40.62%), Postives = 86/160 (53.75%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L A  LQRIF+  D+NGDG +++EEL+  L R+G++  L +L++ VE      +  L F D   S                     D  S  E  SDL +AF VFD NGDGFI++ ELQ+VL +LGL +    +    MI   D N DG +DF EFKNMM
Sbjct:   25 LNALRLQRIFDLFDKNGDGFITVEELSQALTRLGLNADLSDLKSTVESYIQPGNTGLNF-DDFSSLHKTLDDSFFGGACGGGENEDDPSSAAENESDLAEAFKVFDENGDGFISARELQTVLKKLGLPEGGEMERVEKMIVSVDRNQDGRVDFFEFKNMM 183          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML3_ARATH (Calmodulin-like protein 3 OS=Arabidopsis thaliana GN=CML3 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.938e-20
Identity = 58/156 (37.18%), Postives = 89/156 (57.05%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +L RIF+  DRNGDG ++ +ELN  LE +G++   ++L  ++EK  L  D ++                            + ++  +EE  D+ +AF+VFD N DGFIT EEL+SVLA LGL   ++ +DC+ MI   D + DG+++F+EFK MM
Sbjct:    5 ELARIFQMFDRNGDGKITKQELNDSLENLGIYIPDKDLVQMIEKIDLNGDGYV-----------------DIEEFGGLYQTIMEERDEEE--DMREAFNVFDQNRDGFITVEELRSVLASLGLKQGRTLEDCKRMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML5_ARATH (Calmodulin-like protein 5 OS=Arabidopsis thaliana GN=CML5 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.458e-19
Identity = 61/184 (33.15%), Postives = 97/184 (52.72%), Query Frame = 1
Query:   28 NPHYILLSLTHNMAP---LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +P  +L S + + AP   +  ++L+R+F+  D+NGDG ++ EELN  LE +G++   ++L  ++ K        +  DEF     SI+                        + G+ E  D+  AF+VFD +GDGFIT EEL+SV+A LGL   K+   C+ MI   D + DG ++++EF  MM
Sbjct:   43 SPSTMLPSPSSSSAPTKRIDPSELKRVFQMFDKNGDGRITKEELNDSLENLGIYIPDKDLTQMIHKIDANGDGCVDIDEFESLYSSIVDEHH--------------------NDGETEEEDMKDAFNVFDQDGDGFITVEELKSVMASLGLKQGKTLDGCKKMIMQVDADGDGRVNYKEFLQMM 206          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML7_ARATH (Calmodulin-like protein 7 OS=Arabidopsis thaliana GN=CML7 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 57/162 (35.19%), Postives = 90/162 (55.56%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL----C--FDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +L+R+F+  D+NGDG ++ +EL+  L  +G++   +EL  ++EK  +    C   DEF     +I+                        D  DEE  D+ +AF+VFD NGDGFIT +EL++VL+ LGL   K+  DC+ MI   D + DG ++++EF+ MM
Sbjct:    5 ELKRVFQMFDKNGDGTITGKELSETLRSLGIYIPDKELTQMIEKIDVNGDGCVDIDEFGELYKTIM------------------------DEEDEEEEDMKEAFNVFDQNGDGFITVDELKAVLSSLGLKQGKTLDDCKKMIKKVDVDGDGRVNYKEFRQMM 142          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML28_ORYSJ (Probable calcium-binding protein CML28 OS=Oryza sativa subsp. japonica GN=CML28 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.487e-19
Identity = 58/166 (34.94%), Postives = 89/166 (53.61%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL----CFD--EFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            + + +L+++F+  D+NGDG ++ +EL    +  G+    +EL+A ++K       C D  EF     SI+                       DD    E   + +AF+VFD NGDGFIT +EL+SVL+ LGL   +++ DCR MI + D + DG +DF+EFK MM
Sbjct:    1 MDSTELRKVFKMFDKNGDGRITKKELGESFKNFGIFIPDDELDATMDKIDANGDGCVDVEEFGLLYRSILGDDAAGRAPRTAAAAIGGEGGAPDD----EDEGMREAFNVFDQNGDGFITVDELRSVLSSLGLKHGRTADDCRRMISMVDADGDGRVDFKEFKQMM 162          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML22_ORYSJ (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica GN=CML22 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 2.105e-18
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 1
Query:   79 ANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPSL----CFD--EFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            A +L R+FE  DRNGDG ++ EEL   L ++G+    +EL A++ +       C D  EF     SI++                       +  +EE  D+ +AF VFD NGDG+IT +EL +VLA LGL   +++++CR MI   D + DG +DF EF  MM
Sbjct:   90 AAELARVFELFDRNGDGRITREELEDSLGKLGIPVPADELAAVIARIDANGDGCVDVEEFGELYRSIMAGGDDSKDGRAK------------EEEEEEDGDMREAFRVFDANGDGYITVDELGAVLASLGLKQGRTAEECRRMIGQVDRDGDGRVDFHEFLQMM 241          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML2_ARATH (Calmodulin-like protein 2 OS=Arabidopsis thaliana GN=CML2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 53/162 (32.72%), Postives = 82/162 (50.62%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKP------SLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +L R+F+  D+NGDG ++  EL    + +G+     E+  ++ K       ++  DEF      ++                            EE  D+ +AF VFD NGDGFIT EEL+SVLA +GL   ++ +DC+ MI   D + DG+++F+EFK MM
Sbjct:    5 ELSRVFQMFDKNGDGKIAKNELKDFFKSVGIMVPENEINEMIAKMDVNGDGAMDIDEFGSLYQEMVEEK-------------------------EEEEDMREAFRVFDQNGDGFITDEELRSVLASMGLKQGRTLEDCKKMISKVDVDGDGMVNFKEFKQMM 141          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica GN=CML17 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 60/168 (35.71%), Postives = 88/168 (52.38%), Query Frame = 1
Query:   85 DLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVEKPS------LCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSG------DEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            +L+R+FE  DR+GDG ++ EEL   LER+G+    EEL A + +        +  DEF    ++++                     VD   G      D + + + +AF VFD NGDGFIT +EL +VLA LG+   ++++DC  MI   D + DG +DF EFK MM
Sbjct:    8 ELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYETVMR--------------------VDGGGGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEFKQMM 155          
BLAST of EY659553 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.782e-17
Identity = 59/166 (35.54%), Postives = 85/166 (51.20%), Query Frame = 1
Query:   73 LTANDLQRIFEKLDRNGDGLVSLEELNWVLERIGVHFTLEELEALVE------KPSLCFDEFLFFCDSIISXXXXXXXXXXXXXXXXXXXXVDDDSGDEEISDLYKAFSVFDVNGDGFITSEELQSVLARLGLWDEKSSQDCRSMIYVYDTNSDGVLDFEEFKNMM 552
            L A  L R+F+  D+N DG +++EEL+  L R+G+     +L++ V+      K  L FD+F     ++                           G  E SDL +AF+VFD +GDGFI++ ELQ VL +LGL +    +    MI   D+N DG +DF EFKNMM
Sbjct:   24 LNALRLHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTGLRFDDFAALHKTLDESFFGGEGSCC--------------DGSPE-SDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMM 174          
The following BLAST results are available for this feature:
BLAST of EY659553 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CML44_ARATH1.554e-2945.40Probable calcium-binding protein CML44 OS=Arabidop... [more]
CML42_ARATH2.657e-2140.63Calcium-binding protein CML42 OS=Arabidopsis thali... [more]
CML3_ARATH2.938e-2037.18Calmodulin-like protein 3 OS=Arabidopsis thaliana ... [more]
CML5_ARATH1.458e-1933.15Calmodulin-like protein 5 OS=Arabidopsis thaliana ... [more]
CML7_ARATH2.487e-1935.19Calmodulin-like protein 7 OS=Arabidopsis thaliana ... [more]
CML28_ORYSJ2.487e-1934.94Probable calcium-binding protein CML28 OS=Oryza sa... [more]
CML22_ORYSJ2.105e-1836.59Probable calcium-binding protein CML22 OS=Oryza sa... [more]
CML2_ARATH8.000e-1832.72Calmodulin-like protein 2 OS=Arabidopsis thaliana ... [more]
CML17_ORYSJ8.000e-1835.71Probable calcium-binding protein CML17 OS=Oryza sa... [more]
CML43_ARATH1.782e-1735.54Probable calcium-binding protein CML43 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-D09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659553 ID=EY659553; Name=EY659553; organism=Citrus sinensis; type=EST; length=884bp
ATTGTTTTTCTGGATTGTTAGTTAGTTAATCCCCATTATATATTATTGTC
ACTCACTCACAATATGGCTCCTCTTACCGCCAATGACTTGCAAAGAATTT
TCGAGAAGCTTGATCGAAATGGCGATGGCCTGGTGAGCTTGGAGGAACTC
AACTGGGTTCTTGAAAGAATTGGGGTACATTTTACCCTTGAAGAGCTTGA
AGCCCTAGTTGAAAAACCAAGCCTCTGCTTCGATGAATTCTTGTTCTTCT
GTGATTCCATCATATCGAATAATAATAATAATAATCCCAATGCTGCTGCT
GATGCTTCCCAGAATGCTGATGAAGCAGTTGATGATGACAGCGGCGACGA
AGAGATCAGTGATCTTTACAAAGCGTTCAGTGTGTTCGATGTGAATGGTG
ATGGATTCATTACAAGCGAAGAGCTTCAGAGTGTGTTGGCGAGACTCGGA
TTGTGGGATGAAAAAAGCAGCCAAGATTGCAGAAGCATGATTTACGTGTA
TGATACCAATTCTGATGGGGTTCTTGATTTTGAAGAATTCAAGAACATGA
TGCTTCGTAGTACTGTTTCTTAATTCGTTTATTAATTTCGCGCCTGTTAA
TCTTGACCTTGTTTTTTTTTTTTTTTTTTTATAATCTGTGAAATTATGTT
GATTATATGATGGTCGTAATTTGTTAGACCCGAGATCAACATAATTAGCC
GAGCTTATTAGATTATTTNGTGGTTCGTGTAATCTTATATATATGTGTGT
GTGTGTGTGTACGTATGATCCTTCAAATATGCGTTTCCTTGTGTAAAAAA
AAAAAAACCTATCATAANATCCATATCGGCGCGCCGTTTTATAGATCCAA
CTTACGTACCGTGCCTGCGAAGTTTAACTCTTTT
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