EY659517

Overview
NameEY659517
Unique NameEY659517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7329 contig Csv1_Contig7329:47..756. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659517 vs. ExPASy Swiss-Prot
Match: Y4115_ARATH (Uncharacterized protein At4g01150, chloroplastic OS=Arabidopsis thaliana GN=At4g01150 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.046e-36
Identity = 78/112 (69.64%), Postives = 90/112 (80.36%), Query Frame = 2
Query:  164 RRFPLLQVRASSSEETSTVDADELFSDLKEKWDAVENKSTVLLYGGGAIVAVWLSSTIVGAINSVXXXXXXXXXXXXXYTGWFVYRYLLFKSSRKELATDIEALKKKIAGTE 499
            ++  LL+ RASS EETS++D +EL +DLKEKWD +ENKSTVL+YGGGAIVAVWLSS +VGAINSV             YTGWFVYRYLLFKSSRKELA DIE+LKKKIAG+E
Sbjct:   54 QKVELLKTRASS-EETSSIDTNELITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGSE 164          
The following BLAST results are available for this feature:
BLAST of EY659517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y4115_ARATH2.046e-3669.64Uncharacterized protein At4g01150, chloroplastic O... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-011-A05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659517 ID=EY659517; Name=EY659517; organism=Citrus sinensis; type=EST; length=710bp
AGTCTCGGTGCCGGNATTCCCGGCCCGACCCACGCGTCCGCCACGTGTTC
CCTCAACCACCACCGTCAAAGTCAAATCTTCTCACTGCTTTGCTCTTCCC
TGCCTCCCTCCTCGTTCGTCAACGTCACCATTCTCTTCTTCCATTAAACA
AGTTTCAGAGTCGAGAAGGTTTCCTTTGCTTCAGGTTAGAGCCTCTTCCT
CAGAAGAGACATCCACAGTTGATGCAGATGAACTTTTTTCAGACTTGAAG
GAAAAGTGGGATGCCGTTGAAAACAAGTCCACGGTACTTCTCTATGGAGG
TGGGGCAATAGTGGCTGTTTGGTTATCCTCAACTATTGTTGGTGCCATCA
ATTCAGTGCCTTTGCTTCCCAAACTCTTGGAGTTGATTGGACTTGGTTAT
ACTGGATGGTTTGTCTACAGATACCTTCTCTTCAAGTCAAGCAGAAAAGA
ACTAGCCACGGATATTGAAGCACTGAAGAAGAAGATTGCTGGAACTGAAT
AGATTGTACATTCTGGAGGCAATTCATGTTTGTCCCTGATAGTCATTTAT
TTTGGTCCTCTATCATTGCATATGAGGCACTTGTATCCTGTAGAGTAGGC
TGCGTACGGATTCGTTTTATCCCTGTATTTTCCAGTATATCCCTGGAATA
AGAGATTTGACATAGTTATGTGTATGTCCAGGCATGATTGCTTCTGTGGG
TTTAAAAANA
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