EY659509

Overview
NameEY659509
Unique NameEY659509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7490 contig Csv1_Contig7490:1..877. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.777e-61
Identity = 119/187 (63.64%), Postives = 144/187 (77.01%), Query Frame = 1
Query:  151 ISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT----SRDRAMLVVDSWRAMP 699
            ++LYR+A+ LGD  GQ NLGI+YLQ QP+N +EA+K L Q++  G+VRAQYQLALCLH GR V  NL EA +WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWMKRAAD GH KAQ EHGL LF+EGEM+K+V+YLELA R GE AA  VK V+ QQLSAT    +   A+   ++WR +P
Sbjct:  162 VNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHGHSKAQFEHGLALFSEGEMLKSVLYLELAERGGEAAATPVKEVVHQQLSATFGGQAVHHAIHQANNWRPLP 348          
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: SE1L1_MESAU (Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.384e-12
Identity = 48/166 (28.92%), Postives = 81/166 (48.80%), Query Frame = 1
Query:  160 YRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 651
            +++AA +G+P GQ  LG++YL  +    N + A+K   +A+  G V  Q QL    + G GV  + ++A +++  A++GG++ A YN +  ++ G G+  S   A +  K   + G    +L      + +G+   AVV   L    G   A      IL Q  AT
Sbjct:  438 FKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREAT 603          
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: PODJ_CAUCR (Localization factor podJL OS=Caulobacter crescentus GN=podJ PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12
Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  253 VKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 666
            V+LL +A+  G+  AQ+ L+     G+ GV  ++ EA RW  RAA GG  RAM+N +L Y  GEG P +   A  W ++AAD G   +Q       E GLG+       +A  +  +A RAG++ A      +  QL+A ++  A
Sbjct:  745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYYFKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGV--SQNPAEAYKWYVIAGRAGDSTARGRATALRSQLTAEAQQTA 887          
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: PODJ_CAUCN (Localization factor podJL OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=podJ PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.311e-12
Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 1
Query:  253 VKLLYQASIAGHVRAQYQLALCLHRGR-GVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQL------EHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSATSRDRA 666
            V+LL +A+  G+  AQ+ L+     G+ GV  ++ EA RW  RAA GG  RAM+N +L Y  GEG P +   A  W ++AAD G   +Q       E GLG+       +A  +  +A RAG++ A      +  QL+A ++  A
Sbjct:  745 VELLKRAANGGYPAAQFYLSKMYEGGKNGVKVDMAEARRWSERAANGGDPRAMHNLALYYFKGEGGPRNSTTAASWFRKAADMGLVDSQFNLAQLYESGLGV--SQNPAEAYKWYVIAGRAGDSTARGRATALRSQLTAEAQQTA 887          
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: SE1L1_HUMAN (Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3)

HSP 1 Score: 71.633 bits (174), Expect = 6.936e-12
Identity = 46/163 (28.22%), Postives = 85/163 (52.15%), Query Frame = 1
Query:  160 YRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVV-YLELATRAGETAADHVKNVILQQ 639
            +++AA +G+P GQ  LG++YL  +    N + A+K   +A+  G V  Q QL    + G GV  + ++A +++  A++GG++ A YN +  ++ G G+  S   A +  K   + G    +L      + +G+   AV+ YL LA +  E A  +   ++ Q+
Sbjct:  438 FKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQR 600          
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: SE1L1_RAT (Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 47/166 (28.31%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  160 YRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 651
            +++AA +G+P GQ  LG++YL  +    N + A+K   +A+  G V  Q QL    + G GV  + ++A +++  A++GG++ A YN +  ++ G G+  S   A +  K   + G    +L      + + +   AVV   L    G   A      IL Q  AT
Sbjct:  438 FKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDDDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREAT 603          
BLAST of EY659509 vs. ExPASy Swiss-Prot
Match: SE1L1_MOUSE (Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 47/166 (28.31%), Postives = 80/166 (48.19%), Query Frame = 1
Query:  160 YRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWMKRAADCGHGKAQLEHGLGLFTEGEMMKAVVYLELATRAGETAADHVKNVILQQLSAT 651
            +++AA +G+P GQ  LG++YL  +    N + A+K   +A+  G V  Q QL    + G GV  + ++A +++  A++GG++ A YN +  ++ G G+  S   A +  K   + G    +L      + + +   AVV   L    G   A      IL Q  AT
Sbjct:  434 FKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREAT 599          
The following BLAST results are available for this feature:
BLAST of EY659509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
FB84_ARATH2.777e-6163.64F-box protein At1g70590 OS=Arabidopsis thaliana GN... [more]
SE1L1_MESAU2.384e-1228.92Protein sel-1 homolog 1 OS=Mesocricetus auratus GN... [more]
PODJ_CAUCR5.311e-1235.17Localization factor podJL OS=Caulobacter crescentu... [more]
PODJ_CAUCN5.311e-1235.17Localization factor podJL OS=Caulobacter crescentu... [more]
SE1L1_HUMAN6.936e-1228.22Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L P... [more]
SE1L1_RAT1.545e-1128.31Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Se... [more]
SE1L1_MOUSE2.018e-1128.31Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l P... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-H09-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659509 ID=EY659509|Name=EY659509|organism=Citrus sinensis|type=EST|length=918bp
AGCCTCCGGTNCCGGNATTCCCCCCTCGACCCACGCGTCCGGTGCTTTAT
GAGAAAAATACACATGTCATGACTCTATTGGTCAGAGATATCCATTCAAT
ATCAAAACCTGCATTAACAATTGCTTACTTAAAATCTAAGCTTTTGGGTT
ATTAGCTTGTATCGGCAAGCCGCTGTGCTTGGAGATCCAGCTGGTCAGTT
CAATTTGGGAATTTCTTATTTGCAAGCGCAACCTGCAAATGCAGAGGAAG
CTGTGAAGTTGTTGTATCAAGCATCGATTGCTGGCCATGTTCGAGCTCAG
TATCAACTTGCACTTTGCCTGCATAGAGGTCGAGGAGTGGATTTCAATCT
TCAAGAGGCTGCTAGGTGGTATTTAAGAGCTGCTGAAGGTGGCTATGTGC
GTGCTATGTACAACACCTCTCTTTGCTATTCCTTTGGGGAAGGCTTGCCA
CTGAGTCACAGACAAGCGAGGAAATGGATGAAAAGAGCAGCTGATTGTGG
TCACGGCAAAGCTCAACTTGAGCATGGGCTCGGTCTATTTACGGAAGGAG
AGATGATGAAAGCTGTGGTTTACCTAGAACTTGCAACACGTGCTGGTGAA
ACAGCAGCAGATCATGTCAAGAATGTAATTCTCCAACAACTGTCAGCTAC
TTCACGTGATCGTGCCATGTTAGTCGTCGACAGTTGGCGTGCTATGCCTT
CCCTTCACTGAGTCTGACCTGATGATGGATTACAGGCTTTATAGCTATTA
TACTAAATTCCTTTACGCTTTTTTTTTCTTCCCATTAGTTTTCTCCGTTA
GTACATACTATGTNCTCTTTTATCTTTTCCCTTNCCCTTTTGATCCTGTT
TTGGAAAATTATAAATATTATACGTGCTCTTAGAAGCATTTAGCTTATAG
CTCTGATGAACTTGTGTT
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