EY659493
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659493 vs. ExPASy Swiss-Prot
Match: C3H51_ARATH (Zinc finger CCCH domain-containing protein 51 OS=Arabidopsis thaliana GN=At5g06420 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 1.179e-61 Identity = 121/193 (62.69%), Postives = 146/193 (75.65%), Query Frame = 3 Query: 204 VFKMAESGSGEA--QQAEQVCNFFRKPTKNKNIRKRTIRXXXXXXXXXXX--VLQNLKKPTKPDSKLYFSTGPSKRDTSADSNADSEKPIFQFESSKEIQVQHDSKATATLETETDFLRDSRALREKVLKRSEDALKG--KASGDEKLYKGIHGYVDHKAGFPREHTVSSEKAGGSHGPLRASAHIRVTXRVD 764 V MAE G+ + Q+++QVC FF+KPTK+KNIRKRTI +LQNLKK KPDS LYFS+GPS R + A E+P+F ++SSKEIQVQ+DS ATATLETETDF +D+RA+RE+VLK+++ ALKG K + DEKLYKGIHGY DHKAGF RE T+SSEKAGGSHGPLRASAHIRV+ R D Sbjct: 48 VMNMAEFGNDNSNNQESQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSNLYFSSGPSTRTSGAP-----ERPVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKADHALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARFD 235 HSP 2 Score: 31.5722 bits (70), Expect = 1.179e-61 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 764 YXPDICRDTRDC-YCGYGD 817 Y PDIC+D ++ YCGYGD Sbjct: 236 YQPDICKDYKETGYCGYGD 254
BLAST of EY659493 vs. ExPASy Swiss-Prot
Match: C3H1_ARATH (Zinc finger CCCH domain-containing protein 1 OS=Arabidopsis thaliana GN=At1g01350 PE=2 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 5.800e-61 Identity = 116/183 (63.39%), Postives = 143/183 (78.14%), Query Frame = 3 Query: 228 SGEAQQAEQVCNFFRKPTKNKNIRKRTIRXXXXXXXXXXX--VLQNLKKPTKPDSKLYFSTGPSKRDTSADSNADSEKPIFQFESSKEIQVQHDSKATATLETETDFLRDSRALREKVLKRSEDALKG--KASGDEKLYKGIHGYVDHKAGFPREHTVSSEKAGGSHGPLRASAHIRVTXRVD 764 + + Q++QVC FF+KPTK+KNIRKRTI +LQNLKK KPDSKLYFS+GPSK T+ ++ E+ +F ++SSKEIQVQ+DS ATATLETETDF +D+RA+RE+VLK++++ALKG K + DEKLYKGIHGY DHKAGF RE T+SSEKAGGSHGPLRASAHIRV+ R D Sbjct: 20 AAQETQSQQVCTFFKKPTKSKNIRKRTIDADEEDGDSKSESSILQNLKKVAKPDSKLYFSSGPSKSSTT--TSGAPERSVFHYDSSKEIQVQNDSGATATLETETDFNQDARAIRERVLKKADEALKGNKKKASDEKLYKGIHGYTDHKAGFRREQTISSEKAGGSHGPLRASAHIRVSARFD 200 HSP 2 Score: 31.5722 bits (70), Expect = 5.800e-61 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 764 YXPDICRDTRDC-YCGYGD 817 Y PDIC+D ++ YCGYGD Sbjct: 201 YQPDICKDYKETGYCGYGD 219
BLAST of EY659493 vs. ExPASy Swiss-Prot
Match: C3H15_ORYSJ (Zinc finger CCCH domain-containing protein 15 OS=Oryza sativa subsp. japonica GN=Os02g0301000 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.781e-40 Identity = 96/194 (49.48%), Postives = 119/194 (61.34%), Query Frame = 3 Query: 225 GSGEAQQ--AEQVCNFFRKPTKNKNIRKRTIRXXXXXXXXXXX----VLQNLKKPTKPDSKLYFSTGPSKRDTSADSNADSEKPIFQFESSKEIQVQHDSKATATLETETDFLRDSRALREKVLKRSEDALK--------GKASGDEKLYKGIHGYVDHKAGFPREHTVSSEKAGGSHGPLRASAHIRVTXRVD 764 G GEA + VC+F RKP KN IRKR KK SKL+FS SAD +++ + FQ+ESS+ IQ DS+ATATLETET+F RD+RA+RE+ LK++E++LK SG ++YKGIHGY D+KAGF REHTVSSEKAGGSHGPLRASAHIR++ R D Sbjct: 6 GGGEAGSGGSAPVCSFVRKPPKN--IRKRPTAPAGSDDDDEDGSGAIAAARAKKAPSSTSKLFFS--------SADGSSEPRR--FQYESSRTIQASTDSRATATLETETEFDRDARAIRERQLKQAEESLKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREHTVSSEKAGGSHGPLRASAHIRLSARFD 187 HSP 2 Score: 31.5722 bits (70), Expect = 1.781e-40 Identity = 12/19 (63.16%), Postives = 15/19 (78.95%), Query Frame = 2 Query: 764 YXPDICRDTRDC-YCGYGD 817 Y PDIC+D ++ YCGYGD Sbjct: 188 YQPDICKDYKETGYCGYGD 206 The following BLAST results are available for this feature:
BLAST of EY659493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659493 ID=EY659493; Name=EY659493; organism=Citrus sinensis; type=EST; length=975bpback to top |