EY659484

Overview
NameEY659484
Unique NameEY659484
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659484 vs. ExPASy Swiss-Prot
Match: METB_ARATH (Cystathionine gamma-synthase, chloroplastic OS=Arabidopsis thaliana GN=CGS1 PE=2 SV=3)

HSP 1 Score: 172.555 bits (436), Expect = 2.715e-42
Identity = 97/133 (72.93%), Postives = 107/133 (80.45%), Query Frame = 1
Query:  469 LADLKNEASFLSSDGSLXIHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRRASFEYGRYGNPXTVVVEEKISALEGAESTVIWHLDVC-YTIMLLALVPAGGY-WDNPDGYRRLXIH-ETCLPK 858
            L D K+  SFLSSDGSL +HAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKR  SFEYGRYGNP TVV+E+KISALEGAEST++    +C  T+MLLALVPAGG+     D YR+  I  E  LPK
Sbjct:  164 LTDSKH--SFLSSDGSLTVHAGERLGRGIVTDAITTPVVNTSAYFFKKTAELIDFKEKRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFMENFLPK 294          

HSP 2 Score: 70.8626 bits (172), Expect = 1.113e-11
Identity = 39/64 (60.94%), Postives = 44/64 (68.75%), Query Frame = 1
Query:  127 DPDFSGS--ARFDKPRISAARVIGASTASFSGLSSLIFRFPPNFVRQLSTKARRNCSNIGVAQI 312
            DPD  GS      + R+ A+  I +S    +GLSS I RFPPNFVRQLS KARRNCSNIGVAQI
Sbjct:   25 DPDLVGSPVGGSSRRRVHASAGISSSFTGDAGLSSRILRFPPNFVRQLSIKARRNCSNIGVAQI 88          
The following BLAST results are available for this feature:
BLAST of EY659484 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
METB_ARATH2.715e-4272.93Cystathionine gamma-synthase, chloroplastic OS=Ara... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-009-F06-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659484 ID=EY659484; Name=EY659484; organism=Citrus sinensis; type=EST; length=879bp
CTTATCATATAATACAGAGAGAGCAAAGCCGCCGTCCAATACGACGTCGT
AATGGCCGTGTCCTCATGTTCGAGTCAAAAAATTTTGTCCTTCTCTTCTT
CATGTTCGTCTTTTGAGTGCCGTTCCGATCCCGACTTCTCGGGCTCGGCT
CGGTTTGATAAACCGAGGATCTCGGCGGCGCGAGTCATCGGAGCGTCGAC
GGCGTCGTTTAGCGGCCTGTCGTCTCTGATTTTCAGGTTTCCGCCGAACT
TCGTGCGCCAGCTTAGCACGAAGGCCAGGAGGAACTGCAGCAACATCGGC
GTGGCGCAAATCGTGGCGGCTTCGTGGTCGAACGGTGTGGGTTCCGGCTC
TAACTCGGCGGCGGCTGCAGCAGCTTCCGCTGCCCCCGCCCCGCCCGTCC
CCGTCGAGATTACGAGCGGCGATGACATCGCGCTTGTTGACGGATTGAAA
AATGTACATCTGGAGGCCCTCGCTGATTTGAAAAACGAGGCTTCGTTTTT
GAGCTCCGATGGGAGCCTTGNCATTCATGCCGGTGAAAGATTAGGTCGTG
GTATAGTAACAGATGCAATTACTACCCCAGTGGTGAATACTTCTGCTTAC
TTCTTTAAGAAAACTGCTGAGCTTATTGATTTCAAGGAGAAACGTCGTGC
AAGTTTTGAATATGGGAGGTATGGNAACCCAANCACTGTGGTCGTTGAGG
AGAAGATAAGTGCACTTGAGGGGGCTGAATCCACTGTGATATGGCATCTG
GATGTGTGCTACACAATCATGTTGTTGGCATTGGTTCCAGCCGGGGGCTA
TTGGGACAACCCTGATGGCTACAGAAGACTANGAATTCATGAAACCTGTC
TGCCCAAAAGGGATTCACGCTCCGGGATA
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