EY659367

Overview
NameEY659367
Unique NameEY659367
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659367 vs. ExPASy Swiss-Prot
Match: IQD31_ARATH (Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQD31 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21
Identity = 63/133 (47.37%), Postives = 83/133 (62.41%), Query Frame = 2
Query:  329 ASSPTVLSLHLQYDPVEPNSVSNWLERWSAFHIWKPAPQPKKVSDSKSQKKHVSAQTLEAETGRPKRSVRRNPAANADSISVHSTPEFERSKRSLKKVSAIQQIQ--CTKIPQVNL-KX*A*PEKGHNPLVEN 718
            ASSP VL +H  YD   PNS   WLE WSA   WKP PQPKK    K Q + +    +EAE+ +PK+SVR+ PA+N +S SV ++ EFE+ KRS +KVS+ Q I+    + PQ+ L K      K HNP+VE+
Sbjct:  223 ASSPKVLPVHA-YDTSNPNSNLIWLENWSASCFWKPVPQPKKTISRKPQNRLL----VEAESAKPKKSVRKVPASNFESSSVQTSFEFEKPKRSFRKVSS-QSIEPPAVEDPQIELEKVKRSLRKVHNPVVES 349          
The following BLAST results are available for this feature:
BLAST of EY659367 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
IQD31_ARATH8.174e-2147.37Protein IQ-DOMAIN 31 OS=Arabidopsis thaliana GN=IQ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-D05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659367 ID=EY659367; Name=EY659367; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGTTTATCTCTAAGGTATTCTCAGCAGTATCATGCCCATTT
GTGTGGTTATGATTTTTCCCTTTAATGGATTGAGCTTTATGTTCATATGT
CATATTATTTACAACGAATGTGCATGGCAGAGCCTGTGGTATCAAAAGCA
TTAAGTTCTAATTTGAATATGGCACCCATTGTATTTGCCAGAGGCCTCCA
ATTTAACTAATAATCTGCTGGCAAATATGGCAGGATGTAGTTGCAATTTT
TCTTTTTGATCTACAGCCTTCTTGGTTTATTTTTGTATGTGGGGTAAGTG
ACTTTTCGTTTTTTTACTTTAGCTTCTTGCTTCATCACCCACTGTGTTGT
CTTTGCACCTGCAATATGATCCTGTGGAACCAAATTCAGTCTCAAACTGG
TTAGAACGCTGGTCAGCATTTCACATCTGGAAACCAGCTCCCCAACCAAA
GAAAGTGTCAGACTCAAAATCTCAGAAGAAGCATGTTAGTGCTCAAACCC
TAGAAGCTGAAACAGGCCGACCAAAACGAAGTGTTCGCAGGAACCCTGCT
GCCAATGCAGACAGTATCTCAGTGCACTCAACCCCTGAATTTGAGAGATC
CAAACGTAGTCTGAAGAAAGTTTCAGCCATCCAGCAGATCCAGTGCACGA
AAATCCCACAAGTGAACTTGAAANGTTAAGCGTAGCCTGAGAAAGGTCAT
AATCCTCTAGTAGAAAATCTGCACCTGTCCAGTCAGAAATTGAATTTGAG
AACCCAACACAGTTTTGGAAAAGTGCCACAAGCTTGTATGTCATGAGGTT
GGAAACGAGCTTTGAGCATCAGGTGAAAAGATGAAAAAGAAACACTTGAC
CCATCTGACTACCGATGGAAAACACTCAGACTAGCCAAATGATGAATGCT
GATGACCCCCTGGGACTACC
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