EY659364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG1_PANGI (Squalene monooxygenase OS=Panax ginseng PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.185e-48 Identity = 89/108 (82.41%), Postives = 101/108 (93.52%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYRAPPV 336 +SPD+AR+EMR ACFDYLSLGG+ S GP+ALLSGLNPRP+SL LHFFAVAIYGVGRLL+PFPSPKRMW+GARLI GASGIIFPIIK+EG+RQMFFPA +PA YRAPP+ Sbjct: 431 ASPDKARQEMRNACFDYLSLGGICSQGPIALLSGLNPRPISLFLHFFAVAIYGVGRLLIPFPSPKRMWLGARLILGASGIIFPIIKSEGLRQMFFPAIVPAYYRAPPI 538
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG11_ARATH (Squalene monooxygenase 1,1 OS=Arabidopsis thaliana GN=SQP1,1 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23 Identity = 50/101 (49.50%), Postives = 68/101 (67.33%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPA 315 +S D+A++ MRQ C+DYLS GG ++G +ALL G+NPRP+SL+ H A+ + +G LL PFPSP R+W RL A ++ P +KAEGV QM FP A Sbjct: 405 ASTDEAKEAMRQGCYDYLSSGGFRTSGMMALLGGMNPRPISLIYHLCAITLSSIGHLLSPFPSPLRIWHSLRLFGLAMKMLVPHLKAEGVSQMLFPVNAAA 505
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG12_ARATH (Squalene monooxygenase 1,2 OS=Arabidopsis thaliana GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.488e-22 Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 1 Query: 16 SPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYRA 327 S D+A++ MRQ +DYL GG ++G +ALL G+NPRPLSLV H A+ + +G+LL PFPSP R+W +L A ++ P +KAEGV QM FPA A +++ Sbjct: 407 STDEAKEAMRQGVYDYLCSGGFRTSGMMALLGGMNPRPLSLVYHLCAITLSSIGQLLSPFPSPLRIWHSLKLFGLAMKMLVPNLKAEGVSQMLFPANAAAYHKS 510
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG12_BRANA (Squalene monooxygenase 1,2 OS=Brassica napus GN=SQP1,2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.249e-22 Identity = 50/104 (48.08%), Postives = 72/104 (69.23%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 324 +S D+A++ MRQ CFDYLS GG ++G +AL+ G+NPRPLSL H F +++ +G+LL PFP+P R+W RL+ + ++ P +KAEG+ QM P T A YR Sbjct: 407 ASTDEAKEAMRQGCFDYLSSGGFRTSGLMALIGGMNPRPLSLFYHLFVISLSSIGQLLSPFPTPLRVWHSLRLLDLSLKMLVPHLKAEGIGQMLSP-TNAAAYR 509
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG11_BRANA (Squalene monooxygenase 1,1 OS=Brassica napus GN=SQP1,1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 1.669e-18 Identity = 49/104 (47.12%), Postives = 63/104 (60.58%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 324 +S D+A++ MRQ CFDYLS GG ++G +ALL G+NPRPLSL+ H + + +G+LL PFPSP +W RL AEGV QM PA A YR Sbjct: 406 ASTDEAKEAMRQGCFDYLSSGGFRTSGMMALLGGMNPRPLSLIFHLCGITLSSIGQLLSPFPSPLGIWHSLRLFG-----------AEGVSQMLSPA-YAAAYR 497
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG13_ARATH (Squalene monooxygenase 2 OS=Arabidopsis thaliana GN=SQP2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 1.845e-17 Identity = 43/104 (41.35%), Postives = 66/104 (63.46%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFPSPKRMWIGARLISGASGIIFPIIKAEGVRQMFFPATIPAVYR 324 ++ D+AR+ MRQ CF+YL+ G + G + +L G+NP PL+LVLH A+ + +G LL PFPSP+R W R+++ A ++ + EG ++M P T A YR Sbjct: 405 ATTDEAREGMRQGCFNYLARGDFKTRGLMTILGGMNPHPLTLVLHLVAITLTSMGHLLSPFPSPRRFWHSLRILAWALQMLGAHLVDEGFKEMLIP-TNAAAYR 507
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG1_RAT (Squalene monooxygenase OS=Rattus norvegicus GN=Sqle PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 37/91 (40.66%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 276 S+ D + +++R+ACF Y LGG TGPV LLS L+P PL L+ HFF+VA+Y P P+ ++ ++ A IIFP+I +E Sbjct: 477 SATDDSLRQLRKACFLYFKLGGECLTGPVGLLSILSPDPLLLIRHFFSVAVYATYFCFKSEPWATKPRALFSSGAILYKACSIIFPLIYSE 567
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG1_HUMAN (Squalene monooxygenase OS=Homo sapiens GN=SQLE PE=2 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 1.513e-11 Identity = 38/91 (41.76%), Postives = 54/91 (59.34%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 276 S+ D + ++R+ACF Y LGG GPV LLS L+P PL+L+ HFFAVAIY V P P+ + + ++ A +IFP+I +E Sbjct: 478 SATDDSLHQLRKACFLYFKLGGECVAGPVGLLSVLSPNPLALIGHFFAVAIYAVYFCFKSEPWITKPRALLSSSAVLYKACSVIFPLIYSE 568
BLAST of EY659364 vs. ExPASy Swiss-Prot
Match: ERG1_MOUSE (Squalene monooxygenase OS=Mus musculus GN=Sqle PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 3.370e-11 Identity = 37/91 (40.66%), Postives = 53/91 (58.24%), Query Frame = 1 Query: 13 SSPDQARKEMRQACFDYLSLGGVFSTGPVALLSGLNPRPLSLVLHFFAVAIYGVGRLLLPFP---SPKRMWIGARLISGASGIIFPIIKAE 276 S+ D + ++R+ACF Y LGG TGPV LLS L+P PL L+ HFF+VAIY P P+ ++ ++ A I+FP+I +E Sbjct: 476 SATDDSLHQLRKACFLYFKLGGECVTGPVGLLSILSPHPLVLIRHFFSVAIYATYFCFKSEPWATKPRALFSSGAVLYKACSILFPLIYSE 566 The following BLAST results are available for this feature:
BLAST of EY659364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659364 ID=EY659364; Name=EY659364; organism=Citrus sinensis; type=EST; length=578bpback to top |