EY659356
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY659356 vs. ExPASy Swiss-Prot
Match: U603_ARATH (UPF0603 protein At1g54780, chloroplastic OS=Arabidopsis thaliana GN=At1g54780 PE=1 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 1.372e-42 Identity = 96/192 (50.00%), Postives = 123/192 (64.06%), Query Frame = 3 Query: 57 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKH-NPQLLNPSLQVPRSWFAHAQQGXXXXXXXXXXXXXXXXYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGITRALLCLVXVKRKG 629 MET+LS ++SP LNPKP S LH + SL +K T S KH + + P R+W A+QG G ALASEF++L +GPPK++Y+VDDAGV+S+VTKSDLK+LLSDLE RK +NFITVRKLTSKADAFEYADQVLEKWYPS+EEG + ++ L+ +++G Sbjct: 1 METLLSPRALSPPLNPKPLS--------LHQTKPTSHSLSLSKPTTFSGPKHLSTRFTKPE---SRNWLIDAKQGLAALALSLTLTFSPV----GTALASEFNILNDGPPKETYVVDDAGVLSRVTKSDLKKLLSDLEYRKKLRLNFITVRKLTSKADAFEYADQVLEKWYPSIEEGNNKGIVVLITSQKEG 177 HSP 2 Score: 25.7942 bits (55), Expect = 1.372e-42 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 688 ISENLPVLARDERH 729 +SENLPVLA DE++ Sbjct: 198 VSENLPVLATDEKY 211
BLAST of EY659356 vs. ExPASy Swiss-Prot
Match: U603_ORYSJ (UPF0603 protein Os05g0401100, chloroplastic OS=Oryza sativa subsp. japonica GN=Os05g0401100 PE=3 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 1.294e-36 Identity = 92/203 (45.32%), Postives = 116/203 (57.14%), Query Frame = 3 Query: 57 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPR------------SWFAHAQQGXXXXXXXXXXXXXXXXYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGITRALLCLVXVKRKG 629 MET+LS S L+P S K SP+ A S ++C+L++ P P V SW Q G A+ASEFDVL GPP+D+Y+VDDAGV+S+VTKSD+K+L+ DLESRKN INFITVRKLTSKADAFEYADQVLEKWYP+VEEG + ++ LV +++G Sbjct: 1 METLLSP---STLLSPLRGSKKKPASPAASASSSSSSP--ARSVVSCALRRQQP----PPQAVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAP---APAVASEFDVLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGNNKGIVVLVTSQKEG 191 HSP 2 Score: 25.7942 bits (55), Expect = 1.294e-36 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 688 ISENLPVLARDERH 729 +SENLPVLA DE++ Sbjct: 212 VSENLPVLATDEKY 225
BLAST of EY659356 vs. ExPASy Swiss-Prot
Match: U603_ORYSI (UPF0603 protein OsI_019212, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_19898 PE=3 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 1.294e-36 Identity = 92/203 (45.32%), Postives = 116/203 (57.14%), Query Frame = 3 Query: 57 METILSSPSISPFLNPKPSSSKTLFSPSLHAQQQRQSSLFCTKNITCSLKKHNPQLLNPSLQVPR------------SWFAHAQQGXXXXXXXXXXXXXXXXYTNGNALASEFDVLTEGPPKDSYLVDDAGVISKVTKSDLKQLLSDLESRKNFHINFITVRKLTSKADAFEYADQVLEKWYPSVEEGITRALLCLVXVKRKG 629 MET+LS S L+P S K SP+ A S ++C+L++ P P V SW Q G A+ASEFDVL GPP+D+Y+VDDAGV+S+VTKSD+K+L+ DLESRKN INFITVRKLTSKADAFEYADQVLEKWYP+VEEG + ++ LV +++G Sbjct: 1 METLLSP---STLLSPLRGSKKKPASPAASASSSSSSP--ARSVVSCALRRQQP----PPQAVAAWRGDGGRGGGVGSWATFLQHGLAAAALSLAISMAPAP---APAVASEFDVLNGGPPEDTYVVDDAGVLSRVTKSDVKRLVRDLESRKNIRINFITVRKLTSKADAFEYADQVLEKWYPTVEEGNNKGIVVLVTSQKEG 191 HSP 2 Score: 25.7942 bits (55), Expect = 1.294e-36 Identity = 10/14 (71.43%), Postives = 13/14 (92.86%), Query Frame = 1 Query: 688 ISENLPVLARDERH 729 +SENLPVLA DE++ Sbjct: 212 VSENLPVLATDEKY 225 The following BLAST results are available for this feature:
BLAST of EY659356 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY659356 ID=EY659356; Name=EY659356; organism=Citrus sinensis; type=EST; length=901bpback to top |