EY659342

Overview
NameEY659342
Unique NameEY659342
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length889
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig873 contig Csv1_Contig873:158..1046. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: GDC_HUMAN (Graves disease carrier protein OS=Homo sapiens GN=SLC25A16 PE=2 SV=3)

HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26
Identity = 67/181 (37.02%), Postives = 99/181 (54.70%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY-*EGGIRALYSSIRSTLAGILPMLA*SPYI*GTKRHVPEEH 800
            P +R K+LLQ     ++  GV+ +L+ + ++EG LG YKGNGA ++RI PY A+ FM +E Y+  I        SG V  L+AGS+AG TAV+CTYPLD+ R +LA+QV                + +Y+G+     ++Y  EGG    Y  +  T+ G+ P    S +  GT + V   H
Sbjct:   56 PLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGI--SGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVK--------------GEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSH 220          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: GDC_BOVIN (Graves disease carrier protein OS=Bos taurus GN=SLC25A16 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 4.706e-26
Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY-*EGGIRALYSSIRSTLAGILPMLA*SPYI*GTKRHV 788
            P +R K+LLQ     ++  GV+ +L+ + K+EG LG YKGNGA ++RI PY A+ FM +E Y+  I        SG V  L+AGS+AG TAV+CTYPLD+ R +LA+QV                +  Y+G+     ++Y  EGG    Y  +  T+ G+ P    S +  GT + V
Sbjct:   54 PLDRVKVLLQAHNHHYRHLGVFSTLRAVPKKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGV--SGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVK--------------GEHTYTGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSV 214          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: GDC_MOUSE (Graves disease carrier protein homolog OS=Mus musculus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.048e-25
Identity = 67/177 (37.85%), Postives = 97/177 (54.80%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY-*EGGIRALYSSIRSTLAGILPMLA*SPYI*GTKRHV 788
            P +R K+LLQ     ++  GV  +L+ + ++EG LG YKGNGA ++RI PY A+ FM +E Y+ +I        SG V  L+AGS+AG TAV+CTYPLD+ R +LA+QV                +  YSG+     ++Y  EGG    Y  +  T+ G+ P    S +  GT + V
Sbjct:   56 PLDRVKVLLQAHNRHYKHLGVLSTLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGV--SGHVHRLMAGSMAGMTAVICTYPLDVVRVRLAFQVK--------------GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYAGVSFFTFGTLKSV 216          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: MCFB_DICDI (Mitochondrial substrate carrier family protein B OS=Dictyostelium discoideum GN=mcfB PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.582e-24
Identity = 60/171 (35.09%), Postives = 92/171 (53.80%), Query Frame = 3
Query:  261 PFERTKIL-------LQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILPMLA 752
            P ER KIL       L+     ++ RG+ QSLK +   EG +GF+KGNG +V+RI PY+A+ F++YE+Y+ +++NN          +L  G  AG T++LCTYPLDL R++L  QV                   Y+G+ D    +  E G+  LY  + ++  G+ P +A
Sbjct:  158 PLERLKILNQVGHMNLEQNAPKYKGRGIIQSLKTMYTTEGFIGFFKGNGTNVIRIAPYSAIQFLSYEKYKNFLLNNNDQTHLTTYENLFVGGAAGVTSLLCTYPLDLIRSRLTVQVFGN---------------KYNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVA 313          

HSP 2 Score: 71.2478 bits (173), Expect = 8.616e-12
Identity = 46/165 (27.88%), Postives = 80/165 (48.48%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLA-GSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILPMLA 752
            P +  +  L  +  G +  G+  + K ++++EG+ G YKG  AS L + PY A++F TYE  +   I   P   +  V+  L  G+++G TA   TYP+DL R +L  Q +        G + I     Y+G  D    +  + G+  LY+ +      ++P ++
Sbjct:  261 PLDLIRSRLTVQVFGNKYNGIADTCKMIIREEGVAGLYKGLFASALGVAPYVAINFTTYENLKKTFI---PKDTTPTVVQSLTFGAISGATAQTLTYPIDLIRRRLQVQGI--------GGKDI----LYNGTFDAFRKIIRDEGVLGLYNGMIPCYLKVIPAIS 410          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: GDC_RAT (Graves disease carrier protein (Fragment) OS=Rattus norvegicus GN=Slc25a16 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.404e-24
Identity = 67/180 (37.22%), Postives = 97/180 (53.89%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGG---TAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY-*EGGIRALYSSIRSTLAGILPMLA*SPYI*GTKRHV 788
            P +R K+LLQ     ++  GV   L+ + ++EG LG YKGNGA ++RI PY A+ FM +E Y+ +I        SG V  L+AGS+AG    TAV+CTYPLD+ R +LA+QV                +  YSG+     ++Y  EGG    Y  +  T+ G+ P  + S +  GT + V
Sbjct:   56 PLDRVKVLLQAHNHHYKHLGVLSPLRAVPQKEGYLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTFITTKLGV--SGHVHRLMAGSMAGKMSMTAVICTYPLDVVRVRLAFQVK--------------GEHTYSGIIHAFKTIYAKEGGFLGFYRGLMPTILGMAPYASVSFFTFGTLKSV 219          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: YP011_YEAST (Uncharacterized mitochondrial carrier YPR011C OS=Saccharomyces cerevisiae GN=YPR011C PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.850e-22
Identity = 60/169 (35.50%), Postives = 100/169 (59.17%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQ-SRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVID---LLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY-*EGGIRALYSSIRSTLAGILPMLA 752
            PFER KILLQ ++     +RG++ S++++  +EG  G ++GNG + +RI PY+A+ F+ YE  +  + +   + G   + +   L +G+L GG +V+ TYPLDL +T+L+ Q  +     RS  +SI   P   G+  +L+  Y  EGG+R LY  +  T  G++P +A
Sbjct:   42 PFERVKILLQVQSSTTSYNRGIFSSIRQVYHEEGTKGLFRGNGLNCIRIFPYSAVQFVVYEACKKKLFHVNGNNGQEQLTNTQRLFSGALCGGCSVVATYPLDLIKTRLSIQTANLSSLNRSKAKSISKPP---GIWQLLSETYRLEGGLRGLYRGVWPTSLGVVPYVA 207          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: S2542_XENTR (Solute carrier family 25 member 42 OS=Xenopus tropicalis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 57/182 (31.32%), Postives = 96/182 (52.75%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSG--PVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILPMLA*SPYI*GTKRHVPEEH 800
            P +RTKI+ Q  +  F ++  Y+ + +    EG L  ++GN A+++R++PYAA+ F  +E+Y+  + + Y   GS   P+  LLAG+LAG TA + TYPLDL R ++A                +  +  YS +  V   +  E G+++LY     T+ G++P    S +   T + +  EH
Sbjct:   56 PLDRTKIIFQVSSNRFSAKEAYRLIYRTYLNEGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATIITYPLDLVRARMA----------------VTPKEMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKLHAEH 221          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: S2542_XENLA (Solute carrier family 25 member 42 OS=Xenopus laevis GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.672e-21
Identity = 57/182 (31.32%), Postives = 96/182 (52.75%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSG--PVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILPMLA*SPYI*GTKRHVPEEH 800
            P +RTKI+ Q  +  F ++  Y+ + +    +G L  ++GN A+++R++PYAA+ F  +E+Y+  + + Y   GS   P+  LLAG+LAG TA L TYPLDL R ++A                +  +  YS +  V   +  E G+++LY     T+ G++P    S +   T + +  EH
Sbjct:   56 PLDRTKIIFQVSSNRFSAKEAYRLIYRTYMNDGFLSLWRGNSATMVRVIPYAAIQFCAHEQYKKLLGSYYGFQGSALTPIPRLLAGALAGTTATLLTYPLDLVRARMA----------------VTQKEMYSNIIHVFMRMSREEGLKSLYRGFTPTVLGVIPYAGISFFTYETLKKLHAEH 221          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: MCFP_DICDI (Mitochondrial substrate carrier family protein P OS=Dictyostelium discoideum GN=mcfP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.558e-21
Identity = 62/161 (38.51%), Postives = 90/161 (55.90%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSGPVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P ER KIL Q ++E +    VY S+ K+++ EGI G ++GN A++LR+ PYAA+ F++YE     I N+  +  S      LAGS AGG AV  TYPLDL R +LA +           I     +P +     +L S + + G++ +Y  I+ TL GILP
Sbjct:   34 PLERVKILYQIKSELYSLNSVYGSMLKIVENEGIKGLWRGNSATILRVFPYAAVQFLSYET----IKNHLVADKSSSFQIFLAGSAAGGIAVCATYPLDLLRARLAIE-----------IHKKPTKPHH-----LLKSTFTKDGVKGIYRGIQPTLIGILP 174          
BLAST of EY659342 vs. ExPASy Swiss-Prot
Match: S2542_DANRE (Solute carrier family 25 member 42 OS=Danio rerio GN=slc25a42 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.015e-20
Identity = 52/163 (31.90%), Postives = 87/163 (53.37%), Query Frame = 3
Query:  261 PFERTKILLQTRTEGFQSRGVYQSLKKLLKQEGILGFYKGNGASVLRIVPYAALHFMTYEEYRVWIINNYPSMGSG--PVIDLLAGSLAGGTAVLCTYPLDLARTKLAYQVVDTGXSLRSGIRSICAQPAYSGVKDVLTSVY*EGGIRALYSSIRSTLAGILP 743
            P +RTKI+ Q  +  F ++  Y+ + +   ++G    ++GN A+++R++PYAA+ F  +E+Y+  +   Y   G    PV  LLAGSLAG TA + TYPLD+ R ++A                +  +  YS + DV   +  E G++ LY     T+ G++P
Sbjct:   55 PLDRTKIIFQVSSNRFSAKEAYRLIYRTYLKDGFFSLWRGNSATMVRVIPYAAIQFCAHEQYKGILGKYYGFQGKALPPVPRLLAGSLAGTTAAIITYPLDMVRARMA----------------VTPKEMYSNIMDVFVRISREEGLKTLYRGFTPTILGVVP 201          
The following BLAST results are available for this feature:
BLAST of EY659342 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GDC_HUMAN4.706e-2637.02Graves disease carrier protein OS=Homo sapiens GN=... [more]
GDC_BOVIN4.706e-2637.85Graves disease carrier protein OS=Bos taurus GN=SL... [more]
GDC_MOUSE1.048e-2537.85Graves disease carrier protein homolog OS=Mus musc... [more]
MCFB_DICDI2.582e-2435.09Mitochondrial substrate carrier family protein B O... [more]
GDC_RAT4.404e-2437.22Graves disease carrier protein (Fragment) OS=Rattu... [more]
YP011_YEAST1.850e-2235.50Uncharacterized mitochondrial carrier YPR011C OS=S... [more]
S2542_XENTR2.672e-2131.32Solute carrier family 25 member 42 OS=Xenopus trop... [more]
S2542_XENLA2.672e-2131.32Solute carrier family 25 member 42 OS=Xenopus laev... [more]
MCFP_DICDI4.558e-2138.51Mitochondrial substrate carrier family protein P O... [more]
S2542_DANRE1.015e-2031.90Solute carrier family 25 member 42 OS=Danio rerio ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-101-002-B03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659342 ID=EY659342; Name=EY659342; organism=Citrus sinensis; type=EST; length=889bp
CCACGCGTCCGGTGGGTGATAAAAATTTAAATAATTTGTCCAATTCACAG
AGGGTAAAGGTTACGTTTTAATTGGTTGAATTGGTTTGAGTCGGATTCAT
GGGTTCTCAGCAAGGCTCTACATTGTCAACGAATGTGGCTGGACTAGTTG
ATGGCTCGTCAGCTTGTAGAGAGGTTTCCTATGATGATAGTTTGCCTGTG
TATGTTAAGGAGCTAATTGCTGGAGGTGCTGCAGGGGCATTTGCTAAGAC
GGCTGTTGCACCTTTTGAACGGACTAAAATACTCTTGCAGACTAGAACTG
AAGGGTTCCAGTCTCGTGGAGTGTATCAATCCTTGAAGAAGTTATTGAAG
CAAGAGGGCATTCTTGGATTTTATAAGGGAAATGGAGCTAGTGTTCTTCG
GATTGTTCCTTATGCAGCCTTACATTTCATGACATATGAGGAGTATCGTG
TTTGGATCATAAATAACTATCCGTCCATGGGATCAGGTCCTGTTATAGAT
CTATTAGCTGGTTCGCTAGCTGGAGGAACAGCAGTTTTATGCACGTATCC
TTTAGATCTGGCTCGTACAAAACTTGCTTATCAGGTCGTGGACACAGGAN
GAAGTTTGAGGAGTGGTATTAGAAGTATATGTGCTCAGCCTGCATATAGT
GGCGTAAAAGATGTACTTACAAGCGTCTATTAGGAAGGGGGGATACGTGC
TCTATATTCGAGCATAAGGTCAACATTAGCTGGAATCCTCCCTATGCTGG
CCTGAAGTCCATATATATGAGGAACTAAAAGGCATGTCCCTGAGGAACAC
CAAAATCCATTGTGATGCCCCCTTCCTGGGGACCTTTGGCTGGGTATTCC
GGCAAACATTCCATACCCTTTAAAGTTGTAGGAAAAAAT
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