EY659311

Overview
NameEY659311
Unique NameEY659311
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659311 vs. ExPASy Swiss-Prot
Match: ST7R_ARATH (7-dehydrocholesterol reductase OS=Arabidopsis thaliana GN=DWF5 PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.257e-50
Identity = 105/202 (51.98%), Postives = 133/202 (65.84%), Query Frame = 3
Query:   27 QSWHYLRQNGLHGFINIWPTPTAVAGKLIACFRSFEAALQLLLPA*WVEGPISPTGHHPCYNADGAAAYAVTLITYLTLWWFGIFNPTICHDHLGEIYAALIVGSSTLSLFLYIKGH*TPSPTDSGSCGNILIDFYWGVVLFPRIARTVASK-YSRLQS*DDALG*SRCPYCISGIHI-CKWEDSCR-QYILMLIHDTNSSW 623
            Q++ +  +NG+ G INIWP PT +A K+I C+ +FEA LQLLLP   VEGPISP G+ P Y A+G AAY VTL TYL LWWFGIFNP I +DHLGEI++ALI GS    + LYIKGH  PS +DSGSCGN++IDFYWG+ L+PRI ++   K ++  +    +       YCI    I  K  DS     ILML++ T   W
Sbjct:   42 QTFGFFWENGVQGLINIWPRPTLIAWKIIFCYGAFEAILQLLLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATYLGLWWFGIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDFYWGMELYPRIGKSFDIKVFTNCRFGMMSWAVLAVTYCIKQYEINGKVSDSMLVNTILMLVYVTKFFW 243          
The following BLAST results are available for this feature:
BLAST of EY659311 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
ST7R_ARATH1.257e-5051.987-dehydrocholesterol reductase OS=Arabidopsis thal... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-008-G03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659311 ID=EY659311; Name=EY659311; organism=Citrus sinensis; type=EST; length=899bp
ATGGGACATGCTGATGGGTCTGTTATCAGTCATGGCACTACTTGCGGCAA
AATGGGCTGCACGGGTTTATAAATATATGGCCAACACCTACTGCTGTTGC
TGGGAAATTAATTGCTTGTTTCCGATCATTTGAAGCTGCACTTCAGCTTC
TTCTTCCTGCCTAATGGGTTGAGGGTCCCATTTCTCCTACTGGGCATCAC
CCATGTTACAACGCAGATGGTGCGGCCGCATATGCAGTTACCTTAATTAC
CTATCTAACCCTTTGGTGGTTTGGAATATTCAACCCCACCATCTGCCATG
ATCATCTGGGAGAAATATATGCGGCACTTATTGTTGGAAGCTCCACCTTG
AGTCTGTTCTTATACATCAAAGGCCACTAGACGCCATCTCCCACCGATTC
TGGTTCATGTGGAAACATATTAATCGACTTCTACTGGGGTGTGGTGCTGT
TTCCTCGAATTGCCAGGACTGTGGCATCAAAGTATTCCAGACTGCAGAGT
TGAGATGATGCCTTGGGCTGATCTCGCTGTCCTTATTGTATTAGCGGGAT
CCACATATGCAAATGGGAAGATTCATGCCGCCAATACATATTGATGCTGA
TTCATGATACAAATTCTTCATGGGGAAACCGTTGCCGGAACCCCTGGAAT
TGCTCAGGATCACCGGGGATTATATTTCCTGGGGAGATGGGTATGGCCCC
TTTGGGGGTCGCGCCCTGCATGTAGCGGGTAAACCTCCGGGCGTTTGGCC
CCCAGGTTAAATTTTTTTCATCAGCGGCCTTCTTTGCTTTGCCTCCATAT
GTTTGCCCACGGAAGCGGGCAATTCCATAACCATTGGGGGTCTCGGTTTG
GGCCATCCCCCTCAAAAATCCCCTTCGTACCAAATACTTGGGGAAACAA
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