EY659187 | Citrus Genome Database

Overview


Name	EY659187
Unique Name	EY659187
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	893

Libraries


Library Name	Type
Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA_PRUDU (Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 SV=1)

HSP 1 Score: 442.965 bits (1138), Expect = 8.290e-129
Identity = 225/254 (88.58%), Postives = 227/254 (89.37%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 8.290e-129
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 442.965 bits (1138), Expect = 8.290e-129
Identity = 225/254 (88.58%), Postives = 227/254 (89.37%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 8.290e-129
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_PEA (Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 442.965 bits (1138), Expect = 8.290e-129
Identity = 225/254 (88.58%), Postives = 227/254 (89.37%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 8.290e-129
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1)

HSP 1 Score: 441.425 bits (1134), Expect = 2.404e-128
Identity = 224/254 (88.19%), Postives = 227/254 (89.37%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV +IKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 2.404e-128
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA3_HORVU (Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 PE=2 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 9.097e-128
Identity = 224/254 (88.19%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 9.097e-128
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA2_ORYSJ (Tubulin alpha-2 chain OS=Oryza sativa subsp. japonica GN=TUBA PE=2 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 9.097e-128
Identity = 224/254 (88.19%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 9.097e-128
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_ELEIN (Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 441.039 bits (1133), Expect = 9.097e-128
Identity = 224/254 (88.19%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 9.097e-128
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA2_MAIZE (Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV=1)

HSP 1 Score: 440.654 bits (1132), Expect = 1.187e-127
Identity = 223/254 (87.80%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVA+LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 1.187e-127
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_MAIZE (Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV=1)

HSP 1 Score: 440.654 bits (1132), Expect = 1.187e-127
Identity = 223/254 (87.80%), Postives = 226/254 (88.98%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAV                 VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVA+LLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDV EFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ SSMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAILLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 37.3502 bits (85), Expect = 1.187e-127
Identity = 18/31 (58.06%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     +V PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPSVVPGGDL 368

[Close]

BLAST of EY659187 vs. ExPASy Swiss-Prot
Match: TBA1_ANEPH (Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUBA1 PE=2 SV=1)

HSP 1 Score: 438.728 bits (1127), Expect = 1.549e-127
Identity = 223/254 (87.80%), Postives = 228/254 (89.76%), Query Frame = 3

Query:    3 QLIIGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAFHEQLSVAEITNSAFDASSMMAKCDPRHGKYMACCLMYRGDXVPKDVNAAVGTIKTSAQFSLV 764
            QLI GKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVF+AV  X              VDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDV+VLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKA+HEQLSVAEITNSAF+ +SMMAKCDPRHGKYMACCLMYRGD VPKDVNAAV TIKT      V
Sbjct:   91 QLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFHAVGGXTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFV 344

HSP 2 Score: 38.891 bits (89), Expect = 1.549e-127
Identity = 19/31 (61.29%), Postives = 21/31 (67.74%), Query Frame = 2

Query:  743 QRTIQFGDCCPTGFSAGLTIS-TTVGPGGDL 832
            +RTIQF D CPTGF  G+     TV PGGDL
Sbjct:  338 KRTIQFVDWCPTGFKCGINYQPPTVVPGGDL 368

The following BLAST results are available for this feature:

BLAST of EY659187 vs. ExPASy Swiss-Prot

BLAST of EY659187 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 420


Match Name	E-value	Identity	Description
TBA_PRUDU	8.290e-129	88.58	Tubulin alpha chain OS=Prunus dulcis GN=TUBA PE=2 ...	[more]
TBA4_GOSHI	8.290e-129	88.58	Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA1_PEA	8.290e-129	88.58	Tubulin alpha-1 chain OS=Pisum sativum GN=TUBA1 PE...	[more]
TBA2_GOSHI	2.404e-128	88.19	Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 S...	[more]
TBA3_HORVU	9.097e-128	88.19	Tubulin alpha-3 chain OS=Hordeum vulgare GN=TUBA3 ...	[more]
TBA2_ORYSJ	9.097e-128	88.19	Tubulin alpha-2 chain OS=Oryza sativa subsp. japon...	[more]
TBA1_ELEIN	9.097e-128	88.19	Tubulin alpha-1 chain OS=Eleusine indica GN=TUBA1 ...	[more]
TBA2_MAIZE	1.187e-127	87.80	Tubulin alpha-2 chain OS=Zea mays GN=TUBA2 PE=3 SV...	[more]
TBA1_MAIZE	1.187e-127	87.80	Tubulin alpha-1 chain OS=Zea mays GN=TUBA1 PE=3 SV...	[more]
TBA1_ANEPH	1.549e-127	87.80	Tubulin alpha-1 chain OS=Anemia phyllitidis GN=TUB...	[more]

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Properties


Property Name	Value
Genbank description	CS00-C1-101-004-D03-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY659187 ID=EY659187; Name=EY659187; organism=Citrus sinensis; type=EST; length=893bp
AACAACTCATCATCGGCAAGGAAGATGCTGCCAACAATTTTGCTCGTGGC
CACTACACAATTGGGAAGGAGATTGTTGATCTATGCTTGGACCGGATCAG
AAAACTTGCTGATAATTGCACTGGGCTACAAGGGTTCCTGGTGTTCAATG
CTGTTGGAGGTGGTACTGGCTCTGGACTTGGGTCACTTCTCTTGGAGCGT
CTCTCTGTTGACTATGGAAAGAAATCAAAGCTTGGTTTCACTGTGTATCC
TTCACCTCAGGTTTCCACATCAGTTGTGGAACCTTACAACAGTGTTCTTT
CAACACATTCCCTCCTTGAGCACACCGATGTTGCTGTGCTTCTTGATAAT
GAAGCCATCTATGATATCTGCAGGCGCTCTCTTGACATTGAGCGCCCCAC
TTACACCAATCTCAACCGACTGGTCTCTCAGGTGATCTCATCCCTTACTG
CTTCTTTGAGGTTTGATGGAGCTCTGAATGTGGATGTGACTGAGTTCCAG
ACCAATTTGGTTCCCTATCCAAGGATCCATTTCATGCTCTCCTCTTATGC
CCCAGTTATCTCTGCTGAGAAGGCATTCCATGAGCAACTTTCAGTTGCTG
AGATCACCAACAGTGCTTTTGATGCATCATCCATGATGGCCAAATGTGAC
CCTCGTCATGGCAAGTACATGGCCTGCTGCTTGATGTATCGTGGTGATNG
TGTGCCTAAGGATGTGAATGCAGCTGTGGGCACCATCAAGACCAGCGCAC
AATTCAGTTTGGTGACTGTTGCCCTACTGGATTCAGTGCCGGATTAACTA
TCAGCACAACTGTGGGCCCTGGTGGGGACCTGCCAAGTGCAAAGGGCTGC
CTGCTGATTTCAACTCCACAACGTGGTGAATGGGTTTTTGCCT