EY659140
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RK28_ARATH (50S ribosomal protein L28, chloroplastic OS=Arabidopsis thaliana GN=RPL28 PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 2.210e-51 Identity = 108/154 (70.13%), Postives = 122/154 (79.22%), Query Frame = 2 Query: 41 MATMATPGGVLLGNTSNLPFRRPRLSPKSMVKAVSSSEELGFVTSQLSGIKISYSLPDVATPISSRPFAPGLQPIVARRVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 502 M TMAT G L R S KSM K+ +S+ELGF+TSQLSG++ISY+ DV IS F PG+QPIVARR+CPFTGKK+N+ANKVSFSNHKT K QFVNLQYK+VWWEAGKR+VKLRLSTKALKTIEKNGLDAVAKKAGIDLRK+ Sbjct: 1 MTTMATQGAWL----------RMTSSAKSMTKSTVTSKELGFLTSQLSGLRISYTPSDVINRISLPSF-PGIQPIVARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 143
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RK28_TOBAC (50S ribosomal protein L28, chloroplastic OS=Nicotiana tabacum GN=RPL28 PE=1 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.894e-43 Identity = 97/154 (62.99%), Postives = 113/154 (73.38%), Query Frame = 2 Query: 41 MATMATPGGVLLGNTSNLPFRRPRLSPKSMVKAVSSSEELGFVTSQLSGIKISYSLPDVATPISSRPFAPGLQPIVARRVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 502 MATM G+ L R ++ ++ + S EL FVTSQLSG+KIS + ++ S PF P LQP VARR+CPFTGKKSN+ANKVS SNHKT K QFVNLQYK++WWEAGKRYVKLRLSTKA+KTIEKNGLDAVAKKAGIDL K+ Sbjct: 1 MATMVA--GISLRGPVMSSHRTFSVTKRASLPQSKLSSELSFVTSQLSGLKISSTHFISSSAPLSVPFKPSLQP-VARRICPFTGKKSNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKAGIDLSKK 151
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_THEEB (50S ribosomal protein L28 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpmB PE=3 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.635e-20 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGKK+N A +S S+ +T K Q VNLQ+K+VWW GKR+V+LRLSTKA+KT+E+ GL A AK+AG+DL K Sbjct: 3 RVCQLTGKKANNAYAISHSHRRTKKLQQVNLQWKRVWWPEGKRWVRLRLSTKAIKTLERKGLSAFAKEAGLDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_CYAP4 (50S ribosomal protein L28 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rpmB PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.495e-20 Identity = 46/75 (61.33%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGK++N A VS S+ +T K Q VNLQ+K++WW GKR+V+LRLSTKALKT+E GLD+ A++AGIDL K Sbjct: 3 RVCQLTGKRANNAYAVSHSHRRTKKLQEVNLQWKRIWWPQGKRWVRLRLSTKALKTLEHKGLDSFAREAGIDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNP2 (50S ribosomal protein L28 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rpmB PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.308e-19 Identity = 45/75 (60.00%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 R C TGKK+N A VS S+ +T K Q VNLQ+K+VWW G R+V+LRLSTKA+KT+EK G+DA+A++AGI+L K Sbjct: 3 RKCQITGKKANNAMAVSHSHRRTKKLQEVNLQWKRVWWPEGNRFVRLRLSTKAIKTLEKKGIDAMAREAGINLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_CYAP7 (50S ribosomal protein L28 OS=Cyanothece sp. (strain PCC 7424) GN=rpmB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19 Identity = 43/75 (57.33%), Postives = 59/75 (78.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 R C TGKK+N A +S S+ +T + Q NLQ+K++WWE GKR+VKLRLSTKA+KT+EK GL ++AK+AGI+L + Sbjct: 3 RHCELTGKKANNAFSISHSHRRTKRLQHANLQWKRIWWEEGKRWVKLRLSTKAIKTLEKKGLASMAKEAGINLNQ 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNP6 (50S ribosomal protein L28 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rpmB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.889e-18 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGKK+N A +S S+ +T + Q VNLQ K++WW G R+VKLRLSTKA+KT++K GL A A++ GIDL++ Sbjct: 3 RVCQLTGKKANNAYAISHSHRRTKRLQNVNLQEKRIWWPEGNRFVKLRLSTKAIKTLQKKGLSAYARELGIDLKR 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_SYNE7 (50S ribosomal protein L28 OS=Synechococcus elongatus (strain PCC 7942) GN=rpmB PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.889e-18 Identity = 42/75 (56.00%), Postives = 57/75 (76.00%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 RVC TGKK+N A +S S+ +T + Q VNLQ K++WW G R+VKLRLSTKA+KT++K GL A A++ GIDL++ Sbjct: 3 RVCQLTGKKANNAYAISHSHRRTKRLQNVNLQEKRIWWPEGNRFVKLRLSTKAIKTLQKKGLSAYARELGIDLKR 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_TRIEI (50S ribosomal protein L28 OS=Trichodesmium erythraeum (strain IMS101) GN=rpmB PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 2.467e-18 Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 R C TGKK+N VS S+ +T K Q NLQ+KKVWW GK++VKL+LSTKA+KT++ G+ A+AK+AGIDL K Sbjct: 3 RKCQLTGKKANNGYSVSHSHIRTHKLQHANLQWKKVWWPQGKKWVKLKLSTKAIKTLQSKGIQAMAKQAGIDLNK 77
BLAST of EY659140 vs. ExPASy Swiss-Prot
Match: RL28_CYAP8 (50S ribosomal protein L28 OS=Cyanothece sp. (strain PCC 8801) GN=rpmB PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 9.373e-18 Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = 2 Query: 275 RVCPFTGKKSNKANKVSFSNHKTTKRQFVNLQYKKVWWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 499 R C TGKK+N A VS S+ +T K Q NLQ+K+VWW G R+V+LRLSTKA+KT+E GL +AK+AGI+L K Sbjct: 3 RKCQLTGKKANNAYAVSHSHRRTKKLQEANLQWKRVWWPEGNRWVRLRLSTKAIKTLETKGLSVMAKEAGINLNK 77 The following BLAST results are available for this feature:
BLAST of EY659140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 60
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Sequences
The
following sequences are available for this feature:
EST sequence >EY659140 ID=EY659140; Name=EY659140; organism=Citrus sinensis; type=EST; length=823bpback to top |