EY659121

Overview
NameEY659121
Unique NameEY659121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length925
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659121_ssr72 microsatellite EY659121_ssr72:72..86. BLAST: Citrus ESTs to Prunus persica proteins V1
EY659121_ssr353 microsatellite EY659121_ssr353:353..364. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659121 vs. ExPASy Swiss-Prot
Match: BLH4_ARATH (BEL1-like homeodomain protein 4 OS=Arabidopsis thaliana GN=BLH4 PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.991e-28
Identity = 72/176 (40.91%), Postives = 89/176 (50.57%), Query Frame = 3
Query:   93 TNNNTSVISQPQLSWLPVPDSGAHHEGAAGNNNPNEIAGVVEGQGXXXXXXXXXQHLEAAKAEELRMGDGGLLYYNTQVGASSSG--TIHHHQFNQFKNLGIH----QQPLHLQTGA-GQNHQVRVGYGSSLGVVNVLRNSKYAKAAQELLEEFCSVGRGQFKKSKFGKNNTNPSS 599
            T+ NT    Q Q    P   S  HH+         ++ G V  +G           L AAKAEE R      +Y     G SSS   + HHHQFNQFKNL +     Q   H   G  G +    +   SS+G +  LRNSKY K AQELLEEFCSVGRG FKK+K  +NN+NP++
Sbjct:  114 TDENTMQPQQQQHFTWP-SSSSDHHQN-------RDMIGTVHVEGGKGLSLSLSSSLAAAKAEEYRS-----IYCAAVDGTSSSSNASAHHHQFNQFKNLLLENSSSQHHHHQVVGHFGSSSSSPMAASSSIGGIYTLRNSKYTKPAQELLEEFCSVGRGHFKKNKLSRNNSNPNT 276          

HSP 2 Score: 31.5722 bits (70), Expect = 4.991e-28
Identity = 14/18 (77.78%), Postives = 15/18 (83.33%), Query Frame = 2
Query:  656 DLAPLSAADRIEHQRRRV 709
            D  PLS ADRIEHQRR+V
Sbjct:  294 DSPPLSPADRIEHQRRKV 311          

HSP 3 Score: 31.5722 bits (70), Expect = 4.991e-28
Identity = 21/54 (38.89%), Postives = 28/54 (51.85%), Query Frame = 1
Query:  709 QLLSMLDXVDRRYTIIVNNAXVVTSSI**WALGSSP*QPW----PEGMSRHFRC 858
            +LLSML+ VDRRY        +V +S     +G     P+     + MSRHFRC
Sbjct:  312 KLLSMLEEVDRRYNHYCEQMQMVVNSF-DQVMGYGAAVPYTTLAQKAMSRHFRC 364          
BLAST of EY659121 vs. ExPASy Swiss-Prot
Match: BLH2_ARATH (BEL1-like homeodomain protein 2 OS=Arabidopsis thaliana GN=BLH2 PE=1 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 4.019e-27
Identity = 82/213 (38.50%), Postives = 100/213 (46.95%), Query Frame = 3
Query:    3 TRPMLLPAPSAATSLQGFSVSGXXXXXXFGTNNNTSVISQPQL---------SWLPVPDSGAHHEGAAGNNNPNEIAGV-VE---GQGXXXXXXXXXQHLEAA-KAEELRMGDGGLLYYNTQVGASSSGTIHHHQFNQFKNLGIHQQPLHLQTGAGQNHQVRVGYGSSLGVVNVLRNSKYAKAAQELLEEFCSVGRGQFKKSKFGKNNTNPSS 599
            T  MLLP+PS  T+                  N T+ +S  QL         +W   PD   HH     +N+  EI  V VE   G G           LEAA KAEE         Y N   GA+SS    HHQ+NQFK L  +    H Q    Q         SS+  VN+LRNS+Y  AAQELLEEFCSVGRG  KK+K G N++NP++
Sbjct:  169 TLHMLLPSPSTNTTHH---------------QNYTNHMSMHQLPHQHHQQISTWQSSPDHHHHH-----HNSQTEIGTVHVENSGGHGGQGLSLSLSSSLEAAAKAEE---------YRNIYYGANSSNASPHHQYNQFKTLLANSSQHHHQV-LNQFRSSPAASSSSMAAVNILRNSRYTTAAQELLEEFCSVGRGFLKKNKLG-NSSNPNT 350          

HSP 2 Score: 34.6538 bits (78), Expect = 4.019e-27
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = 2
Query:  650 NKDLAPLSAADRIEHQRRRV 709
            NK+  PLSA+DRIEHQRR+V
Sbjct:  366 NKEHPPLSASDRIEHQRRKV 385          

HSP 3 Score: 30.4166 bits (67), Expect = 4.019e-27
Identity = 20/54 (37.04%), Postives = 28/54 (51.85%), Query Frame = 1
Query:  709 QLLSMLDXVDRRYTIIVNNAXVVTSSI**WALGSSP*QPW----PEGMSRHFRC 858
            +LL+ML+ VDRRY        +V +S     +G     P+     + MSRHFRC
Sbjct:  386 KLLTMLEEVDRRYNHYCEQMQMVVNSF-DIVMGHGAALPYTALAQKAMSRHFRC 438          
The following BLAST results are available for this feature:
BLAST of EY659121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
BLH4_ARATH4.991e-2840.91BEL1-like homeodomain protein 4 OS=Arabidopsis tha... [more]
BLH2_ARATH4.019e-2738.50BEL1-like homeodomain protein 2 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-F05-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659121 ID=EY659121; Name=EY659121; organism=Citrus sinensis; type=EST; length=925bp
CCACGCGTCCGATGTTGTTGCCAGCCCCGTCCGCTGCTACTTCTCTTCAA
GGGTTTAGTGTGTCAGGAGCAGCTGCTGCTGCTGCTTTTGGCACTAATAA
TAATACTAGTGTGATCTCTCAACCACAACTGTCATGGCTTCCTGTTCCTG
ATAGCGGCGCCCATCATGAAGGAGCGGCAGGCAACAATAACCCAAATGAA
ATTGCTGGAGTTGTGGAGGGTCAAGGCCTTTCACTTTCATTATCATCATC
TTTACAACACTTGGAGGCAGCAAAAGCAGAAGAGTTAAGGATGGGAGATG
GTGGGTTATTGTATTATAACACTCAAGTAGGTGCTTCTTCTTCTGGTACT
ATTCATCATCATCAGTTTAATCAGTTCAAGAATTTGGGTATTCATCAACA
GCCACTGCACTTGCAAACCGGAGCAGGTCAAAACCATCAAGTTCGTGTTG
GGTATGGGTCTTCTTTAGGAGTTGTGAACGTTTTAAGAAATTCGAAGTAT
GCTAAAGCCGCCCAAGAATTGTTAGAAGAATTTTGTAGTGTTGGAAGGGG
TCAGTTCAAGAAGAGCAAATTCGGTAAGAACAACACAAACCCTAGTTCTA
NTANTGGCNGCGGCGGAAGCGGTGCCGGCTGCGGCGGTTCTTCTTCGTCA
ACAAAGATCTCGCTCCTTTATCAGCCGCCGATAGAATTGAGCATCAACGA
AGGAGGGTCAACTATTATCCATGCTTGATGANGTGGATCGAAGATACACC
ATTATTGTGAACAATGCAANTGTAGTGACCTCATCNATCTAGTGATGGGC
TTTGGGGAGCAGTCCATAACAGCCCTGGCCAGAAGGCATGTCTCGGCATT
TTCGTTGCTAAAGAGCAATACGACCATTGAGCAAAGTGGGACTACTCGAA
AAAAATGTGCAGGCATCGGCATACT
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