EY659091

Overview
NameEY659091
Unique NameEY659091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY659091_ssr109 microsatellite EY659091_ssr109:109..123. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_MOUSE (UPF0580 protein C15orf58 homolog OS=Mus musculus PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 4.031e-20
Identity = 64/184 (34.78%), Postives = 98/184 (53.26%), Query Frame = 1
Query:  268 PVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLHFRFTHGLAFPL 816
            P++  DS +   W  R++ GLFRY +   +T+++PG  GF+AQLN  R +++R  +  +  V Q FD  +FNF K+   EVLF+ +    G     P+ P   +    +V INVSP+E+GHVLL+P   +   QR+      + L     + +P FR    +L  L   +HLH    + LA PL
Sbjct:   55 PLSRFDSALRSAWRQRLELGLFRYRLEDLQTQILPGSVGFVAQLNIERGIQRRRPQ-NIRSVRQEFDPEQFNFNKIRPGEVLFRMQREPKG-----PATP--KQEDDVLVVINVSPLEWGHVLLVPAPAQGLPQRLLPGVLRVGLEAVLLSLHPGFRVGFNSLGGLASVNHLHLH-CYYLAHPL 229          
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_BOVIN (UPF0580 protein C15orf58 homolog OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 2.001e-19
Identity = 58/174 (33.33%), Postives = 89/174 (51.15%), Query Frame = 1
Query:  265 PPVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLH 783
            PP++  DS +   W  R++ GLFRY +    T+ +PG  GF+AQLN  R +++R  +  +  V Q FD  +FNF ++   EVLF+    +D            V+    +V INVSP+E+GHVLL+P       QR+   +    +     + +P FR    +L  L   +HLH
Sbjct:   54 PPLSHFDSALCSAWRQRMELGLFRYPLGELPTQTLPGTVGFVAQLNVERGVQRRCPQ-NIKSVRQEFDPEQFNFNQIRPGEVLFRLHRKQD--------CSGTVQQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGVEAVLLSSHPGFRVGFNSLGGLASVNHLH 218          
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_HUMAN (UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf58 PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.613e-19
Identity = 59/173 (34.10%), Postives = 90/173 (52.02%), Query Frame = 1
Query:  268 PVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLH 783
            P +  D+ +   W+ RV+ GLFRY +   +T+++PG  GF+AQLN  R +++RP +  +  V Q FD  +FNF K+   EVLF+            P  P  +     +V INVSP+E+GHVLL+P       QR+   +    +     + +P FR    +L  L   +HLH
Sbjct:   55 PQSPFDAALCSAWKQRVELGLFRYRLRELQTQILPGAVGFVAQLNVERGVQRRPPQ-TIKSVRQAFDPVQFNFNKIRPGEVLFRLHR--------EPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARQLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLH 218          
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_XENTR (UPF0580 protein C15orf58 homolog OS=Xenopus tropicalis PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.773e-18
Identity = 64/230 (27.83%), Postives = 107/230 (46.52%), Query Frame = 1
Query:  184 LPLYAFKRVNKFKTEMGVHG------HEVREPEPPVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASE-DGEVQFH----------------------PSAPIDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLH 783
            LP    +  N F+ +    G       E  E    ++  D  +  +WE+++  GLFRY +   +T+++PG   ++AQLN  R + +R  E  +  V Q F+ N+FN+ K+  EE++FQ   SE +  V  H                       S  ++ ++S ++V INVSP+E+GHVL +P    C  Q +  +  L  +     + +P FR    +L      +HLH
Sbjct:    8 LPNATVEEYNYFEEDFVFQGLSWKKRQEFAEDTSFLSPFDKALQSKWEEKMNEGLFRYPLRNVQTKILPGSVSYVAQLNIQRSINRRKPE-DIWSVQQKFNPNQFNYNKIKSEEIVFQMIRSEAEHSVDSHIVQGSMVNGMGSSECKSGSTPQGSCTLECKSSCTLVVINVSPLEFGHVLFMPDPSLCLPQILTENLMLFGMESVFLSSHPGFRVGFNSLGGFASVNHLH 236          
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_MACFA (UPF0580 protein C15orf58 homolog OS=Macaca fascicularis GN=QflA-20034 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.773e-18
Identity = 57/173 (32.95%), Postives = 89/173 (51.45%), Query Frame = 1
Query:  268 PVAFLDSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLH 783
            P +  D+ +   W+ RV+ GLFRY +   +T+++PG  GF+AQLN  R +++R  +  +  V Q FD  +FNF K+   EVL++            P  P  +     +V INVSP+E+GHVLL+P       QR+   +    +     + +P FR    +L  L   +HLH
Sbjct:   55 PQSPFDAALCSAWKQRVELGLFRYRLRELQTQILPGVVGFVAQLNVERGVQRRRPQ-TIKSVRQAFDPEQFNFNKIQPGEVLYRLHR--------EPDLPGTLLQEDILVVINVSPLEWGHVLLVPEPARGLPQRLLPGALRAGIEAVLLSLHPGFRVGFNSLGGLASVNHLH 218          
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_XENLA (UPF0580 protein C15orf58 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 66/228 (28.95%), Postives = 105/228 (46.05%), Query Frame = 1
Query:  232 GVHGHEVREPEPPVAFL---DSLVLGEWEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEV----QFHPSAP-------------------IDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLH---FRFTHGLAFPLRSS 825
            G+   E R+     +FL   D  +  +WE ++  GLFRY +   +T+++PG   ++AQLN  R + +R  E  +  + Q F+ N+FN+ K+  EE++FQ   SE        + H S+                    ++ +   ++V INVSP+E+GHVL +P    C  Q +  D  L  L     + +P FR    +L      +HLH   F   H L     SS
Sbjct:   28 GLSWKERRQYAEDTSFLSPFDKALQSKWEQKMNEGLFRYPLRNLQTKILPGSLSYVAQLNIQRSINRRKPE-DIWSIQQKFNPNQFNYNKIKPEEIVFQMIRSETEHCVDSDKVHGSSVNGMGTSDCKSGSTHQRCCILECKGGCTLVVINVSPLEFGHVLFMPDPSLCLPQILTEDLMLFGLESVLLSAHPGFRVGFNSLGGFASVNHLHLHGFYLDHDLFIESSSS 254          
BLAST of EY659091 vs. ExPASy Swiss-Prot
Match: CO058_DANRE (UPF0580 protein C15orf58 homolog OS=Danio rerio GN=zgc:153343 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.753e-15
Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 1
Query:  304 WEDRVQRGLFRYDVTACETRVIPGQYGFIAQLNEGRHLKKRPTEFRVDKVLQPFDGNKFNFTKVGQEEVLFQFEASEDGEVQFHPSAPIDVENSPSVVAINVSPIEYGHVLLIPRSLECXAQRIDRDSFLLALYMAAEAGNPYFRWXTTALVHLLQ-SHLH 783
            W ++   GLFRY +   ETR++PG  G+IAQLN  R  ++R  +  +  V Q FD  +FNF K+  +E+LF+ +   + +                 V INVSP+E+GH LL+P   +C  Q +   +    +     + +P FR    +L      +HLH
Sbjct:   39 WTEKRNTGLFRYRLDELETRILPGSRGYIAQLNIMRGTERRKPQ-EILSVRQNFDPKQFNFNKINPKELLFELKRESERKCS---------------VIINVSPLEFGHCLLVPEPEKCFPQVLTHLAVQTGIETVLLSADPGFRVGFNSLGGFASVNHLH 183          
The following BLAST results are available for this feature:
BLAST of EY659091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
CO058_MOUSE4.031e-2034.78UPF0580 protein C15orf58 homolog OS=Mus musculus P... [more]
CO058_BOVIN2.001e-1933.33UPF0580 protein C15orf58 homolog OS=Bos taurus PE=... [more]
CO058_HUMAN2.613e-1934.10UPF0580 protein C15orf58 OS=Homo sapiens GN=C15orf... [more]
CO058_XENTR3.773e-1827.83UPF0580 protein C15orf58 homolog OS=Xenopus tropic... [more]
CO058_MACFA3.773e-1832.95UPF0580 protein C15orf58 homolog OS=Macaca fascicu... [more]
CO058_XENLA8.405e-1828.95UPF0580 protein C15orf58 homolog OS=Xenopus laevis... [more]
CO058_DANRE1.753e-1531.68UPF0580 protein C15orf58 homolog OS=Danio rerio GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-001-C10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659091 ID=EY659091; Name=EY659091; organism=Citrus sinensis; type=EST; length=909bp
CCACGCGTCCGGTTTCTTTTGTTTTTTTTTTTGGGAAATTTCATGATGTT
GAGGATCAAGAGGGTGCCGACGGTTGTTTCGAATTATCAGAAAGAGGAGA
CGGAGGAGGCTGCTGCTGCTGCTCGTCGTGTAAGCGGGTGCGGGAGGAAT
TGCTTGAACAAATGTTGCATTCAAGGTGCAAAGCTTCCTTTATATGCTTT
CAAGAGGGTGAACAAGTTTAAAACTGAAATGGGTGTGCATGGACACGAGG
TTAGAGAGCCCGAGCCTCCCGTTGCATTTCTGGACTCGCTCGTTCTTGGG
GAGTGGGAGGACCGCGTACAGAGAGGACTATTTCGCTATGATGTTACTGC
CTGTGAAACCAGGGTCATTCCTGGTCAGTATGGTTTCATTGCTCAACTGA
ACGAGGGCCGCCACCTGAAGAAAAGGCCTACTGAGTTCCGTGTTGATAAG
GTCCTCCAGCCTTTTGATGGGAACAAGTTCAACTTTACCAAAGTGGGGCA
AGAAGAGGTGCTCTTCCAGTTTGAGGCAAGCGAAGATGGTGAAGTCCAGT
TTCACCCAAGTGCCCCCATTGATGTTGAGAATTCTCCAAGTGTTGTTGCC
ATCAATGTGAGTCCTATTGAGTACGGNCATGTGCTGTTGATCCCACGAAG
TCTTGAGTGCTTNGCACAGAGGATTGACCGTGATAGCTTCTTGCTCGCAC
TTTACATGGCTGCAGAAGCTGGGAATCCATACTTCAGGTGGGNTACAACA
GCTTTGGTGCATTTGCTACAATCACACCTTCACTTCAGGTTTACTCATGG
CCTTGCTTTTCCATTGAGAAGCTCCTACAGAGATAACTCTACTGGCAGGG
GGGGAAAACCCTGAGTTTTAACTATCGGCAAAGCCCCGCTTGGAGGGGAA
ACCCCGGAA
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