Isolation, Characterization, and Expression Analysis of an SKP1-like Gene from ‘Shatian' Pummelo (Citrus grandis Osbeck)

Publication Overview
TitleIsolation, Characterization, and Expression Analysis of an SKP1-like Gene from ‘Shatian' Pummelo (Citrus grandis Osbeck)
AuthorsChai L, Biswas MK, Ge X, Deng X
TypeJournal Article
Journal NamePlant molecular biology reporter
Volume28
Issue4
Year2010
Page(s)569-577
CitationChai L, Biswas MK, Ge X, Deng X. Isolation, Characterization, and Expression Analysis of an SKP1-like Gene from ‘Shatian' Pummelo (Citrus grandis Osbeck). Plant molecular biology reporter. 2010; 28(4):569-577.

Abstract

Plant s-phase kinase-associated protein 1 (SKP1) genes have diverse functions in plant developmental and physiological activities. Herein, we described a novel SKP1 gene, designated as CgSKP1, from ‘Shatian' pummelo (Citrus grandis Osbeck). The cDNA sequence of CgSKP1 was 603 bp and contained an open reading frame of 477 bp. Genomic sequence of the CgSKP1 gene contained two exons and one intron. The predicted amino acid sequence of this gene is consisted of 158 amino acids with theoretical proteins size of 17.9 kDa. CgSKP1 had high identity with SKP1 genes from other plant species within two conserved region. Full-length cDNAs were also amplified and cloned from six citrus varieties, with 95% nucleotide identity and about 98% amino acid similarity among them. Gel blot analysis suggested that CgSKP1 existed as a single locus in the ‘Shatian' pummelo genome. The expression of CgSKP1 was gradually increased during flower developmental stages in ‘Shatian' pummelo. Moreover, expression analysis by RT-PCR, qRT-PCR and in situ hybridization of CgSKP1 showed that it was highly expressed in the leaf, petal, anther and ovary, but lowly in the style. These findings indicated that CgSKP1 was closely related to ‘Shatian' pummelo flower development.
Features
This publication contains information about 2 features:
Feature NameUniquenameType
CgSKP1CgSKP1genetic_marker
Actin.1Actin.1genetic_marker
Stocks
This publication contains information about 6 stocks:
Stock NameUniquenameType
ValenciaValenciaaccession
AnliuchengAnliuchengaccession
FrostFrostaccession
JinchengJinchengaccession
MarshMarshaccession
ShatianShatianaccession
Properties
Additional details for this publication include:
Property NameValue
Publication TypeJournal Article
Publication Date2010
Published Location|||
Language Abbreng
Publication Model[electronic resource].
URLhttp://dx.doi.org/10.1007/s11105-010-0184-2
KeywordsCitrus maxima, pummelos, kinases, plant proteins, plant development, gene expression, genes, gene expression regulation, complementary DNA, open reading frames, amino acid sequences, sequence analysis, molecular weight, exons, introns, loci, flowering, leaves, nucleic acid hybridization, reverse transcriptase polymerase chain reaction, corolla, ovules, anthers, s-phase kinase-associated protein 1, molecular sequence data