EY649572

Overview
NameEY649572
Unique NameEY649572
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, greenhouse plantcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.668e-13
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQLTP FY+T+CPN SNI+  ++ N   SD RITAS++RLHFHDCFVN
Sbjct:   24 SLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVN 75          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.109e-12
Identity = 30/50 (60.00%), Postives = 40/50 (80.00%), Query Frame = 3
Query:   87 SQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S AQLT DFY+TTCPN + I  G+++ A  +D+R+TA ++RLHFHDCFVN
Sbjct:   21 SNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVN 70          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER1A_ARMRU (Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 4.109e-12
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQLTP FY+ +CPN SNI+   + N   SD RI AS++RLHFHDCFVN
Sbjct:   26 SLSDAQLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVN 77          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.196e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQLTP FY+ +CPN SNI+  ++ N   SD  I AS++RLHFHDCFVN
Sbjct:    5 SFSNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVN 56          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.561e-11
Identity = 33/51 (64.71%), Postives = 37/51 (72.55%), Query Frame = 3
Query:   84 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI ASLIRLHFHDCFVN
Sbjct:   27 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVN 77          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER34_ARATH (Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.039e-11
Identity = 31/52 (59.62%), Postives = 38/52 (73.08%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQLTP FY+ +CPN +NI+   + N   SD RI AS++RLHFHDCFVN
Sbjct:   26 SLSAAQLTPTFYDRSCPNVTNIVRETIVNELRSDPRIAASILRLHFHDCFVN 77          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.479e-11
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQLTP FY+T+CP  +NI+   + N   SD RI  S++RLHFHDCFVN
Sbjct:   27 SFSDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVN 78          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = 3
Query:   84 SSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            +S AQL   FY+ TCPNAS I+   +Q A  SD RI  SLIRLHFHDCFVN
Sbjct:   28 TSSAQLNATFYSGTCPNASAIVRSTIQQALQSDARIGGSLIRLHFHDCFVN 78          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER38_ARATH (Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11
Identity = 30/52 (57.69%), Postives = 37/52 (71.15%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQL+P FY+ TCP   +I+   + NA  SD RI AS++RLHFHDCFVN
Sbjct:   18 SLSHAQLSPSFYDKTCPQVFDIVTNTIVNALRSDPRIAASILRLHFHDCFVN 69          
BLAST of EY649572 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.934e-11
Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 3
Query:   81 SSSQAQLTPDFYNTTCPNASNIILGVLQNAFNSDIRITASLIRLHFHDCFVN 236
            S S AQL+  FY+TTCPN S I+  V+Q A  +D RI  SLIRLHFHDCFV+
Sbjct:   19 SHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVD 70          
The following BLAST results are available for this feature:
BLAST of EY649572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
PER1B_ARMRU1.668e-1365.38Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER58_ARATH4.109e-1260.00Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER1A_ARMRU4.109e-1261.54Peroxidase C1A OS=Armoracia rusticana GN=PRXC1A PE... [more]
PER1C_ARMRU1.196e-1159.62Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER53_ARATH1.561e-1164.71Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER34_ARATH2.039e-1159.62Peroxidase 34 OS=Arabidopsis thaliana GN=PER34 PE=... [more]
PER33_ARATH3.479e-1157.69Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER54_ARATH4.543e-1162.75Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER38_ARATH5.934e-1157.69Peroxidase 38 OS=Arabidopsis thaliana GN=PER38 PE=... [more]
PER15_IPOBA5.934e-1161.54Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-100-001-B04-CT.F Sweet orange leaf, greenhouse plant Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY649572 ID=EY649572; Name=EY649572; organism=Citrus sinensis; type=EST; length=926bp
AATTTCTCTTCAAAAGGAAAATGTCTCCTCTTCGCTATCTTCTTGCAGCA
GCTGTCCTTTTCGCGTTTGTGCTTGACGAATCATCATCTCAAGCTCAGCT
TACGCCAGATTTTTACAACACCACATGCCCTAATGCATCAAACATCATTC
TGGGTGTTCTTCAGAATGCTTTCAATTCCGATATCCGAATCACTGCCAGC
CTCATCAGGCTTCATTTTCATGACTGCTTTGTCAACGTACTTGCTCTTTC
ATTTTCTACTGGCATAAAATGAACTTACTTTTTTTTTGGGCTTTTTTTTT
TGTGGCATTTAAAAATTAATTGAAGGCTTTTTTTTTTTAATTTTTTTTAA
GAACCCCATGAGAAATAAACTTTTCTTTGGTAGTTTACTCGGCTTATGAG
TTTAATTACTCATTTTCCTTCATATTCCTTTTATGACTGATAAATTTTTA
CTCGGTTTTTAGAGCAAAGTAGATCGAGTTCTAGACCAGCTTTCAATGGA
AACAAGGCCTTGTATTTTCTATGTTCTTTCATCTTAGTATGCAGAACAAT
TCTTTGGAAAGAAAAATATCAAGATATCGGATTTGATTAGAAATTGATTT
CCTAACAGGCCGTGATTACAAGTATCCCAAAAGTATTGTAGTCTACAAAT
TTGGCACCGTTTGATGGGCCAAATTTGTTGATTTTATTAATTTTTTAATT
ATTTATGCCAAGCTNCAAATTTTTTATTTATCACTTAGATTAAATTACTG
CCGTTGAGCTGAAAAGTTTTGCCTACGTACACCGGACCGCATATTGAGTG
TCTTGATAGGATTACTCGGCCATTTACATCTTGACTTTTGAACATAAAAG
GTGGGGGATTAAAGGATTAAAACCTACACCCTTATTCAAATACTTTATCT
TTTTCAAAATACTAATCTTAGTTCGG
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