DY305458

Overview
NameDY305458
Unique NameDY305458
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1251
Libraries
Library NameType
SLHcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A4_ARATH (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Arabidopsis thaliana GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 7.750e-23
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 1 
Query:  565 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            MGAN           EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQ
Sbjct:    1 MGANSIPTDATIDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQ 50

HSP 2 Score: 55.0694 bits (131), Expect = 7.750e-23
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   49 VQPVKSPVTICGDIHGQFHDLAELFRIGG 77

HSP 3 Score: 23.8682 bits (50), Expect = 7.750e-23
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G   + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   82 TNYLFMGDYVDRGYYSVETVTLLVALKMRYPQRITILRGNHESRQITQVYGFYDECLRKYG-NANVWKIFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 177
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A_MEDSA (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Medicago sativa GN=PP2A PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.750e-23
Identity = 36/50 (72.00%), Postives = 37/50 (74.00%), Query Frame = 1 
Query:  565 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            MGAN           EQISQLMQCKPLSE QVK LCEKAKEILM+ESNVQ
Sbjct:    1 MGANSMIADVTHDLNEQISQLMQCKPLSEQQVKELCEKAKEILMDESNVQ 50

HSP 2 Score: 55.0694 bits (131), Expect = 7.750e-23
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   49 VQPVKSPVTICGDIHGQFHDLAELFRIGG 77

HSP 3 Score: 24.6386 bits (52), Expect = 7.750e-23
Identity = 31/103 (30.10%), Postives = 47/103 (45.63%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G+  + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   82 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGS-ANVWKIFTDLF--DFFPLTALVESE--IFC--LHGGLSPS 177
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A5_TOBAC (Serine/threonine-protein phosphatase PP2A-5 catalytic subunit OS=Nicotiana tabacum GN=NPP5 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.199e-22
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:  610 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            EQISQLMQCKPLSEP V+ALCEKAKEIL EESNVQ
Sbjct:   17 EQISQLMQCKPLSEPDVRALCEKAKEILAEESNVQ 51

HSP 2 Score: 55.0694 bits (131), Expect = 6.199e-22
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   50 VQPVKSPVTICGDIHGQFHDLAELFRIGG 78

HSP 3 Score: 24.6386 bits (52), Expect = 6.199e-22
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G   + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   83 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRLTILRGNHESRQITQVYGFYDECLRKYG-NANVWKTFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 178
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A3_ARATH (Serine/threonine-protein phosphatase PP2A-3 catalytic subunit OS=Arabidopsis thaliana GN=PP2A3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.121e-21
Identity = 36/50 (72.00%), Postives = 38/50 (76.00%), Query Frame = 1 
Query:  565 MGANXXXXXXXXXXXEQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            MGAN           EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQ
Sbjct:    1 MGANSLPTDATLDLDEQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQ 50

HSP 2 Score: 55.0694 bits (131), Expect = 1.121e-21
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   49 VQPVKSPVTICGDIHGQFHDLAELFRIGG 77
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.818e-21
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:  610 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            EQI+QLMQCKPLSE +V+ LCEKAKEILMEESNVQ
Sbjct:   15 EQIAQLMQCKPLSEQEVRGLCEKAKEILMEESNVQ 49

HSP 2 Score: 55.0694 bits (131), Expect = 3.818e-21
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   48 VQPVKSPVTICGDIHGQFHDLAELFRIGG 76

HSP 3 Score: 24.6386 bits (52), Expect = 3.818e-21
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G   + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   81 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG-NANVWKTFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 176
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSJ (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A2 PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.954e-21
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:  610 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            +QI +LMQCKPL EP+V+ALCEKAKEILMEESNVQ
Sbjct:   10 DQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQ 44

HSP 2 Score: 55.0694 bits (131), Expect = 4.954e-21
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   43 VQPVKSPVTICGDIHGQFHDLAELFRIGG 71

HSP 3 Score: 24.6386 bits (52), Expect = 4.954e-21
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G   + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   76 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG-NANVWKTFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 171
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A2_ORYSI (Serine/threonine-protein phosphatase PP2A-2 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A2 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 4.954e-21
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:  610 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            +QI +LMQCKPL EP+V+ALCEKAKEILMEESNVQ
Sbjct:   10 DQIERLMQCKPLPEPEVRALCEKAKEILMEESNVQ 44

HSP 2 Score: 55.0694 bits (131), Expect = 4.954e-21
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   43 VQPVKSPVTICGDIHGQFHDLAELFRIGG 71

HSP 3 Score: 24.6386 bits (52), Expect = 4.954e-21
Identity = 31/103 (30.10%), Postives = 46/103 (44.66%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G   + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   76 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYG-NANVWKTFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 171
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A_BRANA (Serine/threonine-protein phosphatase PP2A catalytic subunit (Fragment) OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 1.556e-20
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:  610 EQISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            EQISQLMQCKPLSE QV+ALCEKAKEILM+ESNVQ
Sbjct:   12 EQISQLMQCKPLSEQQVRALCEKAKEILMDESNVQ 46

HSP 2 Score: 55.0694 bits (131), Expect = 1.556e-20
Identity = 22/29 (75.86%), Postives = 27/29 (93.10%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDLA++F++ G
Sbjct:   45 VQPVKSPVTICGDIHGQFHDLAELFRIGG 73
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSJ (Serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. japonica GN=PP2A4 PE=2 SV=2)

HSP 1 Score: 63.5438 bits (153), Expect = 1.812e-20
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 1 
Query:  613 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            QI QLM+C+PLSEP+VK LCEKAKEILMEESNVQ
Sbjct:   18 QIEQLMECRPLSEPEVKTLCEKAKEILMEESNVQ 51

HSP 2 Score: 53.5286 bits (127), Expect = 1.812e-20
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDL ++F++ G
Sbjct:   50 VQPVKSPVTICGDIHGQFHDLVELFRIGG 78

HSP 3 Score: 24.2534 bits (51), Expect = 1.812e-20
Identity = 31/103 (30.10%), Postives = 47/103 (45.63%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G+  + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   83 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGS-ANVWKIFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 178
[Close]
BLAST of DY305458 vs. ExPASy Swiss-Prot
Match: PP2A4_ORYSI (Putative serine/threonine-protein phosphatase PP2A-4 catalytic subunit OS=Oryza sativa subsp. indica GN=PP2A4 PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.442e-19
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 1 
Query:  613 QISQLMQCKPLSEPQVKALCEKAKEILMEESNVQ 714
            QI QLM+C+PLSE +VK LCEKAKEILMEESNVQ
Sbjct:   19 QIEQLMECRPLSETEVKTLCEKAKEILMEESNVQ 52

HSP 2 Score: 53.5286 bits (127), Expect = 1.442e-19
Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 2 
Query:  794 LNPVKSPVTICGDIHGQFHDLAKIFQLAG 880
            + PVKSPVTICGDIHGQFHDL ++F++ G
Sbjct:   51 VQPVKSPVTICGDIHGQFHDLVELFRIGG 79

HSP 3 Score: 24.2534 bits (51), Expect = 1.442e-19
Identity = 31/103 (30.10%), Postives = 47/103 (45.63%), Query Frame = 3 
Query:  891 SNYWFRENSGNGGFICLKIYPLW-ALKGRDPRRFQIL*KNQGSAPKISVFGILL*RFRGEGARVHFWEKFFRTFF*TISP*AALGKNQKNIFCPAVGGGRPPT 1196
            +NY F  +  + G+  ++   L  ALK R P+R  IL  N  S     V+G      R  G+  + W+ F   F     P  AL +++  IFC  + GG  P+
Sbjct:   84 TNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGS-ANVWKIFTDLF--DYFPLTALVESE--IFC--LHGGLSPS 179
The following BLAST results are available for this feature:
BLAST of DY305458 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PP2A4_ARATH7.750e-2372.00Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A_MEDSA7.750e-2372.00Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A5_TOBAC6.199e-2291.43Serine/threonine-protein phosphatase PP2A-5 cataly... [more]
PP2A3_ARATH1.121e-2172.00Serine/threonine-protein phosphatase PP2A-3 cataly... [more]
PP2A_TOBAC3.818e-2185.71Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A2_ORYSJ4.954e-2182.86Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A2_ORYSI4.954e-2182.86Serine/threonine-protein phosphatase PP2A-2 cataly... [more]
PP2A_BRANA1.556e-2091.43Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A4_ORYSJ1.812e-2085.29Serine/threonine-protein phosphatase PP2A-4 cataly... [more]
PP2A4_ORYSI1.442e-1982.35Putative serine/threonine-protein phosphatase PP2A... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAM1AC03RM1 SLH Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY305458 ID=DY305458; Name=DY305458; organism=Citrus sinensis; type=EST; length=1251bp
GCTCTTCAACTAGTCTTAAAACGTTCTCATCCGCCTTTTTCTGCTCCATG
GAAGCCAACTGAAGTGAATTGTTCCTCAGGTCATTCTGTTGTCTGTCTGC
GTCAAGTTTTTGTCTCTCACGCTCAGTTAGTGCTTCACGCTTGTTCAATT
GTTTGCTCCAGGAATCAAGTTTCTTCTTCTTGGTCTCCAATTCACAACTG
AGCTTTTCTTGTTCTTCTAAGATCCTTCGAACATTATCACGAGCAAGCCG
CTGCATCTTCCTAGTTTCTTCAACAAAAGCATAGTGCAGTCTGTCTTTCT
CCTCAAGCATCCGGCTCAGAGACATAGTAGTCTCGTTGAACTTACACTGT
AGTTCACTGAGATCTTCATTCTTCATGTCAATCTTACTTGCAAGGTGTGC
AACCACATGAATTTTACTCTGAGCATCTTCCTGAACAATGTCCGAAACTG
TTCTTAACTTCCCTTCCTGGCGAAGATACTCCCCTATTGGTCCCTCGTGC
CGAATTCGGCACGAGGAATCCGGACACCGTTATCCCGATTCGGTTTAGGA
TTCGAGAATCAAAGATGGGCGCAAATTCGTTATCCACTGACACGACCACC
GACCTCGACGAGCAGATCTCGCAGCTCATGCAGTGCAAGCCTCTCTCCGA
ACCACAGGTTAAAGCATTATGCGAGAAGGCTAAAGAGATATTGATGGAAG
AAAGCAATGTACAGGCATCTTCTTTGGAACTAAATACTCTACTGTTGGTT
GCCTTCAGTTGGAAAATTATTAACTTGGTTCTGAAATCCCGGTCTCAATC
CTGTGAAAAGTCCAGTGACAATTTGTGGCGATATTCATGGGCAGTTCCAT
GATCTTGCCAAAATTTTTCAATTGGCGGGAAATGGCCAAATCCAATTACT
GGTTTAGGGAAAATAGTGGAAACGGGGGATTTATTTGTTTAAAAATTTAC
CCCCTATGGGCCCTGAAGGGGCGGGACCCTCGGCGATTTCAAATTCTTTA
AAAAAACCAGGGAAGCGCCCCAAAAATCTCAGTTTTTGGTATTCTCTTAT
AAAGGTTTCGGGGGGAAGGGGCGAGGGTCCATTTTTGGGAAAAATTTTTC
CGGACCTTTTTTTAAACCATTTCTCCTTAAGCGGCGCTTGGAAAAAACCA
AAAAAATATCTTTTGCCCCGCGGTGGGGGGGGGCCGCCCCCCCACCCGGA
TAAATAAAAACTATTGTAAATAAAAAAACAGGAAGAAACCATTTATTATA
C
back to top