CX300681

Overview
NameCX300681
Unique NameCX300681
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4997 contig Csv1_Contig4997:16..616. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_SACJA (Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1)

HSP 1 Score: 294.278 bits (752), Expect = 3.142e-79
Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKL+DEEVDEMIREADIDGDGQINYEEFVKMMMSK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.194e-78
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKL+DEEVDEMIREADIDGDGQINYEEFVKMMMSK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.194e-78
Identity = 147/149 (98.66%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKL+DEEVDEMIREADIDGDGQINYEEFVKMMMSK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_MACPY (Calmodulin OS=Macrocystis pyrifera PE=2 SV=3)

HSP 1 Score: 290.426 bits (742), Expect = 4.536e-78
Identity = 145/149 (97.32%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI+EAFKVFDKDGNGFISAAELRHIMTNLGEKL+DEEVDEMIREADIDGDGQINYEEFVKMMM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIIEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_METSE (Calmodulin OS=Metridium senile PE=1 SV=3)

HSP 1 Score: 285.804 bits (730), Expect = 1.117e-76
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFVKMM SK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_LUMRU (Calmodulin OS=Lumbricus rubellus PE=2 SV=3)

HSP 1 Score: 285.804 bits (730), Expect = 1.117e-76
Identity = 142/149 (95.30%), Postives = 146/149 (97.99%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEI EAF+VFDKDGNGFISAAELRH+MTNLGEKL+DEEVDEMIREADIDGDGQ+NYEEFV MMMSK
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMMSK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PROMN (Calmodulin OS=Prorocentrum minimum PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.246e-76
Identity = 138/149 (92.62%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFL++MARKMKDTD+EEE++EAFKVFD+DGNGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQINYEEFVKMMM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_PFIPI (Calmodulin OS=Pfiesteria piscicida PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.246e-76
Identity = 138/149 (92.62%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFL++MARKMKDTD+EEE++EAFKVFD+DGNGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQINYEEFVKMMM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_KARMI (Calmodulin OS=Karlodinium micrum PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.246e-76
Identity = 138/149 (92.62%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFL++MARKMKDTD+EEE++EAFKVFD+DGNGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQINYEEFVKMMM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
[Close]
BLAST of CX300681 vs. ExPASy Swiss-Prot
Match: CALM_ALEFU (Calmodulin OS=Alexandrium fundyense PE=2 SV=1)

HSP 1 Score: 283.878 bits (725), Expect = 4.246e-76
Identity = 138/149 (92.62%), Postives = 148/149 (99.33%), Query Frame = 1 
Query:   49 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELADMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLSDEEVDEMIREADIDGDGQINYEEFVKMMMSK 495
            MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL DMINEVDADGNGTIDFPEFL++MARKMKDTD+EEE++EAFKVFD+DGNGFISAAELRH+MTNLGEKL+DEEVDEMIREAD+DGDGQINYEEFVKMMM+K
Sbjct:    1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMAK 149
The following BLAST results are available for this feature:
BLAST of CX300681 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 487
Match NameE-valueIdentityDescription
CALM_SACJA3.142e-7999.33Calmodulin OS=Saccharina japonica GN=cam PE=2 SV=1[more]
CALM_PYTSP1.194e-7898.66Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN1.194e-7898.66Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_MACPY4.536e-7897.32Calmodulin OS=Macrocystis pyrifera PE=2 SV=3[more]
CALM_METSE1.117e-7695.30Calmodulin OS=Metridium senile PE=1 SV=3[more]
CALM_LUMRU1.117e-7695.30Calmodulin OS=Lumbricus rubellus PE=2 SV=3[more]
CALM_PROMN4.246e-7692.62Calmodulin OS=Prorocentrum minimum PE=2 SV=1[more]
CALM_PFIPI4.246e-7692.62Calmodulin OS=Pfiesteria piscicida PE=2 SV=1[more]
CALM_KARMI4.246e-7692.62Calmodulin OS=Karlodinium micrum PE=2 SV=1[more]
CALM_ALEFU4.246e-7692.62Calmodulin OS=Alexandrium fundyense PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC08001A12SK PhyRootSw1 Citrus sinensis cDNA clone C08001A12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300681 ID=CX300681; Name=CX300681; organism=Citrus sinensis; type=EST; length=598bp
ATCACAAGATACCCTCCTCCTAACACTCCATAACTTAAATACATTAAAAT
GGCTGATCAATTAACTGAAGAGCAAATTGCTGAGTTCAAGGAAGCATTCT
CCTTATTCGACAAGGACGGAGATGGAACCATCACCACCAAGGAGTTAGGA
ACTGTCATGAGATCTCTTGGTCAGAACCCAACTGAGGCTGAGTTAGCTGA
TATGATCAACGAAGTCGATGCTGATGGCAACGGAACCATCGATTTCCCTG
AGTTCTTAACCATGATGGCCCGCAAGATGAAGGATACTGACTCTGAGGAG
GAAATCCTTGAAGCTTTCAAGGTCTTCGACAAGGACGGCAATGGATTCAT
CTCTGCCGCTGAGTTAAGACACATCATGACCAACTTAGGAGAGAAGTTGT
CGGATGAGGAAGTCGACGAAATGATCCGTGAAGCTGATATTGACGGGGAT
GGTCAGATCAACTACGAAGAGTTCGTCAAGATGATGATGTCCAAGTAAAT
CGTTTGATGACGTCATAAGAGTGTTTCCTCTGAGTGATGCACGCGGTGCG
GGTATAGCGAAGAGGATCACATAGATTATATTGAGACAAATCATTATA
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