EY702108

Overview
NameEY702108
Unique NameEY702108
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length930
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3768 contig Csv1_Contig3768:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2)

HSP 1 Score: 300.442 bits (768), Expect = 9.326e-81
Identity = 151/207 (72.95%), Postives = 169/207 (81.64%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTG 811
            IGVNYGQVADNLPPP+ T KLLQSTSIQK+RLYGADPAIIKALA TGVGIVIGA++GD+P+LASDPNAATQWINSNVLPFYPASKI+LITVGNE+++SND NL++Q               SLGGKIKVSTV++M+VL  SDPPSSGSF    Q  ++GILQFL D GSPF INPYPFFAYQSDPRPETLAFCLF P    +   TG
Sbjct:   26 IGVNYGQVADNLPPPSETVKLLQSTSIQKVRLYGADPAIIKALAGTGVGIVIGAANGDVPSLASDPNAATQWINSNVLPFYPASKIMLITVGNEILMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQTGLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFEPNAGRVDSKTG 232          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E1311_ARATH (Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.779e-39
Identity = 84/213 (39.44%), Postives = 123/213 (57.75%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTGSIHEHV 829
            IGVNYGQ+ DNLP P     L++S    K++LY A+P I+KA +NTG+  +IG  +  +  +  DP+ A  WI  NV PF PA+ I  IT+GNE++  ND +L +                 L  +I V+T H++S+L  S PPS+G F     D++  IL+F +   SPF IN YPFFAY+ +P+   L F LF P +  + P TG  ++++
Sbjct:   29 IGVNYGQIGDNLPSPTDVIPLIKSIGATKVKLYDANPQILKAFSNTGIEFIIGLGNEYLSKM-KDPSKALTWIKQNVTPFLPATNITCITIGNEILALNDSSLTTNLLPAMQGVHSALITAGLSDQISVTTAHSLSILKSSFPPSAGEFQPDLLDSLTPILEFHRKTDSPFLINAYPFFAYKGNPKEVPLDFVLFQPNQGIVDPATGFHYDNM 240          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E1310_ARATH (Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis thaliana GN=At5g42100 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.117e-33
Identity = 81/213 (38.03%), Postives = 117/213 (54.93%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTGSIHEHV 829
            IG+NYGQVA+NLPPP     LL+S    K++LY ADP  ++A A +G  + + A   +  A  SDP  A  W+  NV  + P +KI+ I VGNEV+ SN   L +                 L  +I V+T H++++L  S PPS+ SF R    ++  IL F    GSP  IN YPFFAY+ +P+  +L F LF P +    PG+   ++++
Sbjct:   27 IGINYGQVANNLPPPKNVIPLLKSVGATKVKLYDADPQALRAFAGSGFELTV-ALGNEYLAQMSDPIKAQGWVKENVQAYLPNTKIVAIVVGNEVLTSNQSALTAALFPAMQSIHGALVDCGLNKQIFVTTAHSLAILDVSYPPSATSFRRDLLGSLTPILDFHVKTGSPILINAYPFFAYEENPKHVSLDFVLFQPNQGFTDPGSNFHYDNM 238          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E1312_ARATH (Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.363e-33
Identity = 73/213 (34.27%), Postives = 128/213 (60.09%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT--MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTGSIHEHV 829
            IG+ YG+ ADNLP P   ++L+Q  +I+ +R+Y A+  ++KA ANTG+ ++IG  + D+ A A   +    W+++N+LP+YP++KI  I+VG EV  + D N                    L  KIK+S+ H++++L++S PPSS SF ++ +  ++ +L+FL ++ SPF I+ YP++AY+       L + LF  +   + P TG ++ ++
Sbjct:   27 IGICYGRNADNLPSPNRVSELIQHLNIKFVRIYDANIDVLKAFANTGIELMIGVPNADLLAFAQFQSNVDTWLSNNILPYYPSTKITSISVGLEVTEAPD-NATGLVLPAMRNIHTALKKSGLDKKIKISSSHSLAILSRSFPPSSASFSKKHSAFLKPMLEFLVENESPFMIDLYPYYAYRDSTEKVPLEYALFESSSQVVDPATGLLYSNM 238          

HSP 2 Score: 23.483 bits (49), Expect = 2.363e-33
Identity = 9/11 (81.82%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  816 YMNMFDAQVDA 848
            Y NMFDAQ+DA
Sbjct:  235 YSNMFDAQLDA 245          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E1314_ARATH (Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500/F10A12.18 PE=1 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 5.544e-33
Identity = 72/213 (33.80%), Postives = 119/213 (55.87%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTGSIHEHV 829
            +G+NYGQ+A+NLP PA  A LL+S +I +++LY ADP ++ + +N+ V  +IG  +  +  +++DP  A  W+   + P    ++I  I VGNE+  +ND  LI                  L  ++ V++ H++ +L+ S PPSSGSF  +    ++ +L F     SPF IN YPFFAY+  P+   L + LF P +  + P T   ++++
Sbjct:   29 VGINYGQIANNLPSPARVAVLLRSLNITRVKLYDADPNVLFSFSNSQVDFMIGLGNEYLQNMSTDPTKAQDWLQQRLEPHISKTRITSIVVGNEIFKTNDHVLIQSLLPAMKSVYAALTNLGLEKQVTVTSAHSLDILSTSYPPSSGSFKEEFIQYLQPLLDFHSQIESPFLINAYPFFAYKDSPKEVPLEYVLFQPNQGMVDPNTNLHYDNM 241          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_WHEAT (Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.751e-32
Identity = 81/212 (38.21%), Postives = 116/212 (54.72%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQS-TSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDP---NAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDP-PSSGSF---IRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGT 808
            IGVNYG  ADNLP P + A  L + T+I +++L+ A+P  I A A T + + +   +  +PALA      +AA  WI +N+ P+ PA+ + L+  GNE+++S D NLI                  L G ++V+T H + +LA SD  PS+ SF           +LQF +D GSPF +NPYP+F+Y    RPETL + LF P      P T
Sbjct:   26 IGVNYGANADNLPSPTSVATFLATKTTIDRVKLFDANPTFISAFAGTPISLAVSLPNSALPALADKATGLDAARSWIRANLSPYVPATNVTLLLAGNEILLSTDTNLILSLLPAMRRLAQALKAEGLTG-VRVTTPHYLGILAPSDGIPSNASFRAGYNTKLFPAMLQFHRDTGSPFMVNPYPYFSY----RPETLNYALFRPNSGIYDPAT 232          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E1313_ARATH (Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.331e-32
Identity = 69/213 (32.39%), Postives = 121/213 (56.81%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT--MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHPTRDELTPGTGSIHEHV 829
            +GV YG+ AD+LP P+   +L+Q  +I+ +R+Y  +  ++KA  NT + ++IG  + D+ A +   +    W+ ++VLP+YP +KI  ITVG E       N  S                 L  +IKVST  ++ +L++S PPS+G+F       +R +L+FL ++ SPF I+ YP++AY+  P   +L + LF  + + + P TG +++++
Sbjct:   26 VGVCYGRSADDLPTPSKVVQLIQQHNIKYVRIYDYNSQVLKAFGNTSIELMIGVPNSDLNAFSQSQSNVDTWLKNSVLPYYPTTKITYITVGAESTDDPHINASSFVVPAMQNVLTALRKVGLSRRIKVSTTLSLGILSRSFPPSAGAFNSSYAYFLRPMLEFLAENKSPFMIDLYPYYAYRDSPNNVSLDYVLFESSSEVIDPNTGLLYKNM 238          

HSP 2 Score: 24.6386 bits (52), Expect = 7.331e-32
Identity = 10/11 (90.91%), Postives = 10/11 (90.91%), Query Frame = 3
Query:  816 YMNMFDAQVDA 848
            Y NMFDAQVDA
Sbjct:  235 YKNMFDAQVDA 245          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13A_HORVU (Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vulgare PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 3.848e-26
Identity = 72/207 (34.78%), Postives = 103/207 (49.76%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPA-LASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFHP-TRDELTPGTG 811
            IGV YG VA+NLPP     +L +S  +  +R+Y AD   + AL  +G+G+++     D+ A LA++ + A  W+  NV P+YPA  I  I  GNEV   + QN++                    G IKVST      +  + PPS+G F  Q  M  + + L   G+P   N YP+FAY+ +PR   L +  F P T     P TG
Sbjct:    2 IGVCYGVVANNLPPANEVVQLYRSNGLTGMRIYFADAKALSALRGSGIGLILDVGGNDVLASLAANASNAANWVRDNVRPYYPAVNIKYIAAGNEVWGGDTQNIVPAMRNLGAALKAPGL-----GTIKVSTSIRFDAVTNTFPPSNGVF-AQAYMTDVARLLASTGAPLLTNVYPYFAYKDNPRDIQLNYATFRPGTTTVRDPNTG 202          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: E13B_PHAVU (Glucan endo-1,3-beta-glucosidase, basic isoform OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.564e-26
Identity = 69/197 (35.03%), Postives = 108/197 (54.82%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVMISNDQNLISQ-XXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            IGV YG + +NLP       L +S +I+++RLY  + A ++AL N+G+ +++G  + D+  LA++ + A QW+  NVL F+P+ KI  I VGNEV      +  +Q                 L  +IKVST   M+++  S PPS GSF R D    +  I+ +L    +P  +N YP+F+Y  +PR  +L + LF
Sbjct:    2 IGVCYGMMGNNLPSANEVINLYRSNNIRRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNADTARQWVQRNVLNFWPSVKIKYIAVGNEVSPVGGSSWYAQYVLPAVQNVYQAVRAQGLHDQIKVSTAIDMTLIGNSYPPSQGSF-RGDVRSYLDPIIGYLLYASAPLHVNVYPYFSYSGNPRDISLPYALF 197          
BLAST of EY702108 vs. ExPASy Swiss-Prot
Match: GUB_NICPL (Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 1.462e-25
Identity = 65/197 (32.99%), Postives = 108/197 (54.82%), Query Frame = 2
Query:  197 IGVNYGQVADNLPPPAATAKLLQSTSIQKLRLYGADPAIIKALANTGVGIVIGASSGDIPALASDPNAATQWINSNVLPFYPASKIILITVGNEVM-ISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLF 775
            +GV YG + +NLPP +   +L +S +I+++RLY  + A ++AL  + + +++G  + D+  +A++P+ A  W+  NV  F+PA K   I VGNEV  ++   +L                   L   IKVS+   M+++  S PPS GSF R D    +  I+ F++   SP  +N YP+F+Y  +PR  +L + LF
Sbjct:   33 VGVCYGMLGNNLPPASQVVQLYKSKNIRRMRLYDPNQAALQALRGSNIEVMLGVPNSDLQNIAANPSNANNWVQRNVRNFWPAVKFRYIAVGNEVSPVTGTSSLTRYLLPAMRNIRNAISSAGLQNNIKVSSSVDMTLIGNSFPPSQGSF-RNDVRSFIDPIIGFVRRINSPLLVNIYPYFSYAGNPRDISLPYALF 228          
The following BLAST results are available for this feature:
BLAST of EY702108 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 47
Match NameE-valueIdentityDescription
E137_ARATH9.326e-8172.95Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis ... [more]
E1311_ARATH1.779e-3939.44Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis... [more]
E1310_ARATH1.117e-3338.03Glucan endo-1,3-beta-glucosidase 10 OS=Arabidopsis... [more]
E1312_ARATH2.363e-3334.27Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis... [more]
E1314_ARATH5.544e-3333.80Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis... [more]
E13B_WHEAT2.751e-3238.21Glucan endo-1,3-beta-glucosidase OS=Triticum aesti... [more]
E1313_ARATH7.331e-3232.39Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis... [more]
E13A_HORVU3.848e-2634.78Glucan endo-1,3-beta-glucosidase GI OS=Hordeum vul... [more]
E13B_PHAVU6.564e-2635.03Glucan endo-1,3-beta-glucosidase, basic isoform OS... [more]
GUB_NICPL1.462e-2532.99Lichenase OS=Nicotiana plumbaginifolia GN=GN1 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-B08-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702108 ID=EY702108; Name=EY702108; organism=Citrus sinensis; type=EST; length=930bp
ATGGACGCCTGCGGTACCGGTCCGGAATCCCTCCACAACCACGCGTCCGC
AAGCAACAATCACCACAACAAATTTCACTTTCTTCTCCATCTATTTCTCT
CTGTCCATGGCCAAGTCCAACCCCAACTCCTCACTCTTCCTCTTCGTCTC
TCTCCTCCTTTTTCAAGTTCTTCACTTCTCAAGTTCGCAGTCATTCATCG
GAGTGAACTACGGCCAAGTAGCGGATAACCTGCCCCCGCCGGCGGCTACA
GCGAAGCTTCTGCAATCGACTTCTATACAGAAATTGAGGCTCTACGGTGC
AGATCCGGCCATCATCAAAGCACTAGCAAACACTGGGGTTGGTATTGTAA
TTGGCGCTTCCAGTGGAGATATTCCGGCTCTCGCTTCTGATCCTAACGCC
GCTACTCAGTGGATCAACTCAAACGTGTTGCCTTTTTACCCCGCCAGCAA
AATAATTCTCATCACCGTTGGGAATGAGGTGATGATATCAAATGACCAAA
ATCTAATCAGTCAGCTTCTTCCGGCAATGGCAAATATGCAAAACGCTCTT
AACGCGGCCTCACTTGGTGGGAAAATTAAGGTGTCAACGGTTCATGCGAT
GTCCGTGTTGGCACAATCCGACCCGCCGTCCTCCGGGTCATTCATCCGCC
AAGACACTATGAGAGGGATTTTGCAGTTTCTTAAAGACCACGGCTCCCCT
TTTACCATCAACCCGTACCCGTTTTTCGCTTATCAAAGTGACCCGAGACC
CGAGACTCTTGCCTTCTGTTTGTTTCACCCAACGCGGGACGAGTTGACTC
CCGGAACGGGATCAATACATGAACATGTTCGACGCCCAGGTTGATGCTGG
ACATCAACCTTGAATGGCAGTGGGGTCAGGATGTCCAGATTGTGGGTGCA
AAAACAGGTGGCCTTACGCGGAAACCCGAT
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