EY702092

Overview
NameEY702092
Unique NameEY702092
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length952
Libraries
Library NameType
Sweet orange fruit, development stadium (2 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY702092 vs. ExPASy Swiss-Prot
Match: LUB1_SCHPO (Ubiquitin homeostasis protein lub1 OS=Schizosaccharomyces pombe GN=lub1 PE=1 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 9.851e-14
Identity = 20/56 (35.71%), Postives = 33/56 (58.93%), Query Frame = 1 
Query:  256 RPILDGMLYDYVFETDIRDERRTRKMPYNR*DNTYYADDKWFRKENLPFSYRKQIV 423
            + + +G  YDYVF+ D+ D +   K+PYN  +N Y A +++     LP SY  ++V
Sbjct:  371 KQLFEGKEYDYVFDVDVADGQAPLKLPYNATENPYQAANRFLELNQLPLSYTDEVV 426

HSP 2 Score: 48.9062 bits (115), Expect = 9.851e-14
Identity = 23/58 (39.66%), Postives = 31/58 (53.45%), Query Frame = 3 
Query:   60 ASEKVGFLKMGDXPALEALQSPGTNVGQTKVVPEGDNGVGYSWDMKEQKWDKHGDVVD 233
            +S++VG +K G  P LE L  PG   G   +V   ++   Y W  KE +W K G VVD
Sbjct:  307 SSQEVGDIKKGSLPGLEILSKPGKADGDVVMVRVNNDVEAYQWSQKENEWKKIGQVVD 364
The following BLAST results are available for this feature:
BLAST of EY702092 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LUB1_SCHPO9.851e-1435.71Ubiquitin homeostasis protein lub1 OS=Schizosaccha... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-701-001-A01-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY702092 ID=EY702092; Name=EY702092; organism=Citrus sinensis; type=EST; length=952bp
TTTGAGAAAANAAACAATGGTAGCCTGCTGTACCGGTCCGGATTCCCGTG
CAAAAAAGCGCGTCCGAGAAGGTGGGTTTCCTGAAAATGGGGGATTNACC
TGCGCTTGAGGCTTTACAGAGTCCAGGAACCAATGTTGGCCAGACCAAAG
TTGTTCCAGAAGGGGACAATGGTGTGGGATATTCATGGGATATGAAGGAA
CAGAAATGGGATAAACATGGCGATGTTGTTGATGGGCCAGATGATGGCTA
TGAACCGTCCTATTCTTGATGGAATGCTATATGACTATGTTTTTGAAACT
GATATTAGAGATGAGAGACGCACTCGGAAGATGCCATACAACAGATAAGA
TAATACATACTATGCTGATGATAAGTGGTTTCGCAAGGAGAACCTACCTT
TTTCTTATCGGAAACAAATTGTTGGAATGTATACTTACAAACACGCGGAC
AAAATAGATTCACTCTCCATACATCATTTCCACATCCCTACAATGGTGCA
AGGTGATTAAGAGCCCTGACTCCGCTATATGATGTTTGCGTAAACGAGCA
AAACCTTCATTCTGCGATATTCCGATATATATAAAGAAATTTGTGCATGG
CATAGCCTGAAATATTTCAATCACCTCCCGTTTTTAAATATTTCAAAGGA
CGGGTATGATAGAATTAGAAGATATTTAATTATATAAAAATATAGATTGT
AAGAGAAATTTTTGAGGGCCGCGCTCCCGCGGCTGCTTTCCTAGGTATCG
CACCCCGGAGGAGTGATGCCGGGCTCCGGAGGGGGCACCGACCTACGAAC
AAAAAGAAAAAAGAATATATGTTCACATTGTAATAAACAAAATAATTCTT
TATAAAAATTCTTATCCTCAATCTTATTAAGACAAATATATATAATAATA
AAATCATAATAAAAATAATACATAATAATATGTTATTAAATATAATAAAA
AA
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