EY659640

Overview
NameEY659640
Unique NameEY659640
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length518
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7601 contig Csv1_Contig7601:869..1386. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH6_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 6 OS=Arabidopsis thaliana GN=XTH6 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 2.380e-28
Identity = 50/68 (73.53%), Postives = 58/68 (85.29%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLA 210
            + FDIEGCP+PGP  C SNP NWWE   YQ+L A+EARRYRWVR+NHM+YDYCTD+SR+PVPPPEC A
Sbjct:  225 KDFDIEGCPVPGPTFCPSNPHNWWEGYAYQSLNAVEARRYRWVRVNHMVYDYCTDRSRFPVPPPECRA 292          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH7_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 7 OS=Arabidopsis thaliana GN=XTH7 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 6.924e-28
Identity = 49/70 (70.00%), Postives = 59/70 (84.29%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPANCASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPECLAGI 216
            + FDIEGCP+PGPA+C +N  NWWE + Y  L+ +EAR YRWVR+NHM+YDYCTDKSR+PVPPPEC AGI
Sbjct:  224 KDFDIEGCPVPGPADCPANSKNWWEGSAYHQLSPVEARSYRWVRVNHMVYDYCTDKSRFPVPPPECSAGI 293          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH1_SOLLC (Probable xyloglucan endotransglucosylase/hydrolase 1 OS=Solanum lycopersicum GN=XTH1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 9.706e-14
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 1
Query:   13 FDIEGCPLPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + +Y+YCTDK+RYPVPPPEC
Sbjct:  224 FHVDGCEAATPQEVQVCNTKGMKWWDQKAFQDLDALQYRRLRWVRQKYTVYNYCTDKARYPVPPPEC 290          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH5_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 5 OS=Arabidopsis thaliana GN=XTH5 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.291e-13
Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            RGF ++GC     A  C +    WW+   +Q L A + +R +WVR  + IY+YCTD+ R+PVPPPEC
Sbjct:  221 RGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPEC 287          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH_BRAOB (Xyloglucan endotransglucosylase/hydrolase OS=Brassica oleracea var. botrytis GN=XET16A PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.830e-12
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            RGF I+GC     A  CA+    WW+ N ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  223 RGFHIDGCQASVEAKYCATQGRMWWDQNEFRDLDAEQYRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 289          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH_WHEAT (Probable xyloglucan endotransglucosylase/hydrolase OS=Triticum aestivum GN=XTH PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.085e-12
Identity = 30/67 (44.78%), Postives = 37/67 (55.22%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            RGF ++GC     A  CA+    WW+   +Q L A + RR  WVR  H IY+YCTD  RY    PEC
Sbjct:  221 RGFHVDGCEASAEAKFCATQGARWWDQPEFQDLDAAQYRRLAWVRKEHTIYNYCTDHDRYAAMAPEC 287          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 9.085e-12
Identity = 29/67 (43.28%), Postives = 39/67 (58.21%), Query Frame = 1
Query:   13 FDIEGCPLPGPAN---CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            F ++GC    P     C +    WW+   +Q L A++ RR RWVR  + IY+YCTD+ RYP  PPEC
Sbjct:  223 FHVDGCEAATPQEVQVCNTKGMRWWDQKAFQDLDALQYRRLRWVRQKYTIYNYCTDRKRYPTLPPEC 289          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH4_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 4 OS=Arabidopsis thaliana GN=XTH4 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 29/67 (43.28%), Postives = 42/67 (62.69%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            +GF I+GC     A  CA+    WW+   ++ L A + RR +WVR+   IY+YCTD++R+PV P EC
Sbjct:  224 KGFHIDGCQASVEAKYCATQGRMWWDQKEFRDLDAEQWRRLKWVRMKWTIYNYCTDRTRFPVMPAEC 290          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTH3_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 3 OS=Arabidopsis thaliana GN=XTH3 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.643e-11
Identity = 32/70 (45.71%), Postives = 41/70 (58.57%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPAN----CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            R F + GC + G +N    C S+   WW A NYQ L+  E + Y  VR  +M YDYCTD+S+Y  PP EC
Sbjct:  221 RDFALSGCNIDGRSNNVGACESS-NYWWNAGNYQRLSGNEQKLYEHVRSKYMNYDYCTDRSKYQTPPREC 289          
BLAST of EY659640 vs. ExPASy Swiss-Prot
Match: XTHB_PHAAN (Probable xyloglucan endotransglucosylase/hydrolase protein B OS=Phaseolus angularis GN=XTHB PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.509e-11
Identity = 27/67 (40.30%), Postives = 41/67 (61.19%), Query Frame = 1
Query:    7 RGFDIEGCPLPGPAN-CASNPGNWWEANNYQALTAMEARRYRWVRLNHMIYDYCTDKSRYPVPPPEC 204
            +GF ++GC     +  CA+    WW+   ++ L + + RR +WVR    IY+YCTD++RYP  PPEC
Sbjct:  221 KGFHVDGCEASVNSRFCATQGKRWWDQTEFRDLDSFQWRRLKWVRQKFTIYNYCTDRTRYPQLPPEC 287          
The following BLAST results are available for this feature:
BLAST of EY659640 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
XTH6_ARATH2.380e-2873.53Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH7_ARATH6.924e-2870.00Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_SOLLC9.706e-1446.27Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH5_ARATH6.291e-1344.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_BRAOB1.830e-1246.27Xyloglucan endotransglucosylase/hydrolase OS=Brass... [more]
XTH_WHEAT9.085e-1244.78Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC9.085e-1243.28Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH4_ARATH2.643e-1143.28Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH3_ARATH2.643e-1145.71Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTHB_PHAAN4.509e-1140.30Probable xyloglucan endotransglucosylase/hydrolase... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659640 ID=EY659640; Name=EY659640; organism=Citrus sinensis; type=EST; length=518bp
CGGACGCGTGGGTTTGATATTGAGGGCTGCCCACTTCCTGGACCAGCAAA
CTGTGCCTCGAACCCAGGTAACTGGTGGGAGGCAAATAATTATCAAGCCC
TCACCGCCATGGAAGCAAGAAGATACAGATGGGTTCGTCTCAACCACATG
ATCTATGATTATTGCACTGATAAATCAAGATACCCAGTACCCCCACCGGA
ATGCCTTGCCGGCATATAAATTCAACCCGCCAATTAATTAAGCAGTTGGA
CGGTACTCCATATCCGTATCATATCATGTATATTACTTCACGTACACGTC
CTTTGTATTATTCCCTATTCGTGTGAAAAGACTTATACGCATATCAAGGG
AGGGGCGGGAGGGGAAATAAACATTGTGTGCATTTAAATGTAATTATGGG
AGTGGGAAATATGTGGGTTTTCTGCTCTGCTTGTACCATATATAAGTCTG
AATTTGATGCACAGTATTCTGTGCCAATAAAAGCTTCTTCATAATTGTGA
AAAAAAAAAAAAAAAAAA
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