EY659616

Overview
NameEY659616
Unique NameEY659616
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length448
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY659616 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.410e-16
Identity = 37/66 (56.06%), Postives = 48/66 (72.73%), Query Frame = 3
Query:  111 MSDTCGNCDCADRSQCVIEGNSYADDFLQTDLSFVISFVVMDVQAADAESNCPCRPTCA*VNCTCG 308
            MSDTCGNCDCAD++QCV +G+SY  D ++T+ S  I  VVMD  AA+ +  C C P+C+  NCTCG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKS--IMTVVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of EY659616 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 3.251e-13
Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 3
Query:  111 MSDTCGNCDCADRSQCVIEGNSYADDFLQTDLSFVISFVVMDVQAADAESNCPCRPTCA*VNCTC 305
            MSD CGNCDCAD SQCV +GNS   D ++TD S+ I  VVM V AA++   C C  +C  VNCTC
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNSI--DIVETDKSY-IEDVVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of EY659616 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.613e-12
Identity = 30/64 (46.88%), Postives = 43/64 (67.19%), Query Frame = 3
Query:  120 TCGNCDCADRSQCVIEGNSYADDFLQTDLSFVISFVVMDVQAADAESNCPCRPTCA*VNCTCGS 311
            TCGNCDC D+SQCV +GNSY  D ++T+ S+V   V++  +AA+ +  C C   CA  +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYV-DEVIVAAEAAEHDGKCKCGAACACTDCKCGN 65          
The following BLAST results are available for this feature:
BLAST of EY659616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MT3_CARPA1.410e-1656.06Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_ACTDE3.251e-1356.92Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_MUSAC1.613e-1246.88Metallothionein-like protein type 3 OS=Musa acumin... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C1-101-013-B08-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY659616 ID=EY659616; Name=EY659616; organism=Citrus sinensis; type=EST; length=448bp
TGGTNACGCCTCCCAGCCTCCGGTNCCGGNATTACCGCCTCGACCCACGC
GTCCGCAATATTTTTCCCTCTATTTCCAGTTTTAAGCTCCAAGTTCTAAG
CTCAATCAACATGTCGGACACCTGCGGCAACTGCGACTGCGCTGACAGGA
GCCAGTGTGTGATAGAAGGAAACAGCTATGCTGATGACTTCCTCCAGACT
GACTTGAGCTTTGTCATCTCCTTTGTTGTCATGGACGTTCAGGCTGCTGA
TGCTGAAAGTAACTGCCCGTGCAGGCCCACCTGCGCTTGAGTGAACTGCA
CTTGTGGCAGTCACTAATGAGCAAACGCATGCACCACAAAATAAGATGCT
GCAAATGTGCCTAAATATTGTGGGGGACAAGAATAATGGAAGGGTGATTA
ATATTCTCCAAATGATGATACTCACCATAACTTACACAAGGGAGGTCG
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