DR908090

Overview
NameDR908090
Unique NameDR908090
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Citrus sinensis phloemcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10852 contig Csv1_Contig10852:23..748. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR908090 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.776e-28
Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 3
Query:   27 TAISFLLLTFSTKP-LVGLAD----PLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMHD-KTSIINEDVDLNVRFST--ETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCND 542
            TA+  LL  F++K    G+A+    P++D  G++++    YY++S+I               + CP  VVQ  SD + GT + FS  D K  ++    D+N+ F    +  C+  TVWR+D+YD S GKW++TT GV+G PG  TL +WFK E+ G     YK   CPSVC+SC +LC+D
Sbjct:    5 TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAG--VLGYKFRFCPSVCDSCTTLCSD 182          
BLAST of DR908090 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 111.694 bits (278), Expect = 4.148e-24
Identity = 62/175 (35.43%), Postives = 88/175 (50.29%), Query Frame = 3
Query:   45 LLTFSTKPLVGLAD----PLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNE--LCPLDVVQLSSDSERGTRLRFSMHD-KTSIINEDVDLNVRFSTETRCN--EPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCND 542
            LL  +  PL+  AD    P++D+ G K+    +YY+V  +              N   +CP  VVQ   + +    L F   + K  ++    DLN+ FS    C     TVWR+D YD S G++F+T GGV+GNPG +T+ +WFK E        YK+V CP+VC SC   C D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEF-CGSGFYKLVFCPTVCGSCKVKCGD 190          
BLAST of DR908090 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.597e-15
Identity = 52/153 (33.99%), Postives = 76/153 (49.67%), Query Frame = 3
Query:   87 PLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNEL-CPLDVVQLSSDSERGTRLRFSMHDKTSIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCND 542
            P+VD+ G  V    DY++VSAI              N+  CPL VVQ   D+          + K +I+ E VDLNV+F+    CNE T W+VD + P    W +T GG +G  G ++  + FK ++ G   + YK   CPS   + +  CN+
Sbjct:    5 PIVDIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQDPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITINCNETTAWKVDRF-PGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS-YKFHFCPSYPRTRLIPCNN 155          
BLAST of DR908090 vs. ExPASy Swiss-Prot
Match: DRTI_DELRE (Kunitz-type serine protease inhibitor DrTI OS=Delonix regia PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 6.213e-12
Identity = 46/177 (25.99%), Postives = 79/177 (44.63%), Query Frame = 3
Query:   81 ADPLVDVHGNKVEASRDYYLVSAIXXXXXXXXXXXXXXNELCPLDVVQLSSDSERGTRLRFSMHDKT-SIINEDVDLNVRFSTETRCNEPTVWRVDSYDPSRGKWFITTGGVEGNPGAQTLKNWFKFERIGRDRAMYKIVHCPSVCESCVSLCNDGWGF*RSCLDVWLSLMGARLLL 608
            A+ + D+ G  V    +YY+VSAI                +CP+ ++Q  SD + G  +RFS  +++   I  D +L + F  +  C E + W +       G+  +  GG E +P  + ++ +FK E++G     YK+V CP                  SC D+ ++  G R L+
Sbjct:    3 AEKVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFSSPEESQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVRGFFKIEKLG--SLAYKLVFCPKSSSG-------------SCSDIGINYEGRRSLV 161          
The following BLAST results are available for this feature:
BLAST of DR908090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ASP_THECC2.776e-2838.3321 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
MIRA_RICDU4.148e-2435.43Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
LSPI_CARPA4.597e-1533.99Latex serine proteinase inhibitor OS=Carica papaya... [more]
DRTI_DELRE6.213e-1225.99Kunitz-type serine protease inhibitor DrTI OS=Delo... [more]
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Properties
Property NameValue
Genbank descriptionUSDA-FP_16218 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-13_C08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR908090 ID=DR908090; Name=DR908090; organism=Citrus sinensis; type=EST; length=728bp
ATAACAAAATGAGTACTCCTTTTGTAACTGCAATCTCCTTCCTTCTCCTT
ACCTTTTCCACAAAACCGCTTGTGGGACTCGCTGATCCTTTGGTTGATGT
CCATGGCAACAAGGTCGAAGCATCCCGAGACTACTATTTGGTCTCAGCAA
TTCGAGGAGCAGGCGGTGGCGGCCTCACCCTCTTCAGGGGCAGAAACGAA
CTCTGCCCACTTGATGTTGTCCAACTAAGTTCCGACTCAGAAAGAGGAAC
CCGTTTAAGATTCTCAATGCATGATAAAACTAGTATTATCAATGAAGATG
TGGATCTGAACGTGAGATTCTCCACAGAGACTCGCTGCAACGAACCAACA
GTATGGAGAGTCGACAGCTATGATCCATCGAGAGGAAAATGGTTTATAAC
AACTGGTGGTGTTGAAGGAAACCCTGGAGCTCAAACTTTGAAAAACTGGT
TTAAGTTTGAGAGAATTGGAAGAGATCGAGCTATGTACAAGATTGTTCAC
TGTCCTTCCGTTTGCGAATCCTGTGTATCTTTATGCAATGATGGTTGGGG
TTTCTAACGATCATGCCTCGACGTTTGGCTCTCACTAATGGGCGCGCGCT
TGCTGTTGTTCTAGTCCCTGGTAACGAGAGATCAGCCTCATGTGCGTCTT
GAATGCCCTTGTATCATTACTCTAAATAATGGATCGGGCTAGCTCCTTGA
CGCTTATAACATAAACAAAAATGTCATT
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