DR406115

Overview
NameDR406115
Unique NameDR406115
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length340
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.468e-14
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 2
Query:   68 FIILQIALYSFTFINAFTFNIQNNCAYTVWAAASPGGGKQLEPKSSWTTDVNPGSNKPARIWARTKCTF 274
            F  L    Y     +A TF+I N C YTVWAAASPGGG++L+   SW+ +VNPG+ + ARIW RT C F
Sbjct:   10 FAFLYFGQYFVAVTHAATFDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQ-ARIWGRTNCNF 77          
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.498e-14
Identity = 36/69 (52.17%), Postives = 44/69 (63.77%), Query Frame = 2
Query:   68 FIILQIALYSFTFINAFTFNIQNNCAYTVWAAASPGGGKQLEPKSSWTTDVNPGSNKPARIWARTKCTF 274
            +  L    Y     +A TF+I N C YTVWAAASPGGG+QL    SW+ +VNPG+ + ARIW RT C F
Sbjct:   10 YAFLCFGQYFVAVTHAATFDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQ-ARIWGRTNCNF 77          
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 3.564e-13
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 2
Query:   86 ALYSFTFINAFTFNIQNNCAYTVWAAASPGGGKQLEPKSSWTTDVNPGSNKPARIWARTKCTFGSA 283
            AL   +   A TF I N C+YTVWAAASPGGG++L+   SW  DV  G+ K ARIW RT C F S+
Sbjct:   13 ALLLISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGT-KMARIWGRTNCNFDSS 77          
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.017e-12
Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 2
Query:   92 YSFTFINAFTFNIQNNCAYTVWAAASPGGGKQLEPKSSWTTDVNPGS-NKPARIWARTKCTFGSA 283
            + FT     TFNI NNC +TVWAAA PGGGK+L+   +W   +NPG+  K AR+W RT C F  A
Sbjct:   17 FLFTCARGATFNIINNCPFTVWAAAVPGGGKRLDRGQNWI--INPGAGTKGARVWPRTGCNFDGA 79          
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.336e-11
Identity = 31/73 (42.47%), Postives = 47/73 (64.38%), Query Frame = 2
Query:   68 FIILQIALYSFTFINAFTFNIQNNCAYTVWAAASP-GGGKQLEPKSSWTTDVNPGSNKPARIWARTKCTFGSA 283
            F+   +AL ++T+  A T  ++NNC YTVWAA++P GGG++L+   +W  +  P   K AR+W RT C F +A
Sbjct:    8 FVFFLLALVTYTY--AATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINA-PRGTKMARVWGRTNCNFNAA 77          
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: THM2_THADA (Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.357e-11
Identity = 37/76 (48.68%), Postives = 44/76 (57.89%), Query Frame = 2
Query:   65 PFIILQIALYSFTFINAFTFNIQNNCAYTVWAAASPG------GGKQLEPKSSWTTDVNPGSNKPARIWARTKCTF 274
            PF++L       T   A TF I N C+YTVWAAAS G      GG+QL    SWT +V PG+ K  +IWART C F
Sbjct:   12 PFLLL------LTLSRAATFEIVNRCSYTVWAAASKGDAALDAGGRQLNSGESWTINVEPGT-KGGKIWARTDCYF 80          
BLAST of DR406115 vs. ExPASy Swiss-Prot
Match: OLPA_TOBAC (Osmotin-like protein OS=Nicotiana tabacum GN=OLPA PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.431e-11
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 2
Query:   62 LPFIILQIALYSFTFINAFTFNIQNNCAYTVWAAASP-GGGKQLEPKSSWTTDVNPGSNKPARIWARTKCTFGSA 283
            L F +L    Y++    +  F + NNC YTVWAAA+P GGG++LE   SW     PG+ K ARIW RT C F  A
Sbjct:    8 LVFFLLAFVTYTYA---SGVFEVHNNCPYTVWAAATPVGGGRRLERGQSWWFWAPPGT-KMARIWGRTNCNFDGA 78          
The following BLAST results are available for this feature:
BLAST of DR406115 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PRR1_TOBAC2.468e-1452.17Pathogenesis-related protein R major form OS=Nicot... [more]
PRR2_TOBAC5.498e-1452.17Pathogenesis-related protein R minor form OS=Nicot... [more]
OSL3_ARATH3.564e-1354.55Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
TLP_ACTDE3.017e-1252.31Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
OSMO_TOBAC3.336e-1142.47Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
THM2_THADA4.357e-1148.68Thaumatin-2 OS=Thaumatococcus daniellii PE=2 SV=1[more]
OLPA_TOBAC7.431e-1146.67Osmotin-like protein OS=Nicotiana tabacum GN=OLPA ... [more]
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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248M10 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248M10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR406115 ID=DR406115; Name=DR406115; organism=Citrus sinensis; type=EST; length=340bp
CGGCCGGGGAGAAGCAACTGAAGCATNNNNAGCTTCATCAACTTTAAAGC
CATNNNTTTAATTACCCTTCATAATTCTCCAGATTGCTCTCTACTCCTTC
ACCTTCATCAATGCATTCACCTTTAACATCCAAAACAACTGCGCCTACAC
TGTCTGGGCCGCAGCCTCACCCGGCGGGGGCAAGCAGCTGGAACCGAAAT
CATCCTGGACTACTGATGTGAATCCCGGAAGCAATAAGCCAGCTCGCATA
TGGGCTCGAACCAAGTGCACATTCGGCAGCGCCTGCAAGGTTGTGTTCTG
TCCTTAAGGCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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