DR405993

Overview
NameDR405993
Unique NameDR405993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length579
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:115..692. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.547e-23
Identity = 45/66 (68.18%), Postives = 54/66 (81.82%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACG 290
            MSDTCGNCDCAD++QCVKKGSSY AD +ET+ S ++  VVMD  AAE +G CKCGP+C+C NC CG
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAENDGKCKCGPSCSCTNCTCG 64          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3_MUSAC (Metallothionein-like protein type 3 OS=Musa acuminata PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 7.491e-19
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 3
Query:  102 TCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACGS 293
            TCGNCDC D+SQCVKKG+SY  D VET+ S+V  V+V   +AAE +G CKCG  CAC +C CG+
Sbjct:    3 TCGNCDCVDKSQCVKKGNSYGIDIVETEKSYVDEVIVA-AEAAEHDGKCKCGAACACTDCKCGN 65          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3_ACTDE (Metallothionein-like protein type 3 OS=Actinidia deliciosa GN=pKIWI503 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.718e-18
Identity = 43/65 (66.15%), Postives = 48/65 (73.85%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCAC 287
            MSD CGNCDCAD SQCVKKG+S   D VETD S++   VVM V AAE+ G CKCG +C CVNC C
Sbjct:    1 MSDKCGNCDCADSSQCVKKGNS--IDIVETDKSYIED-VVMGVPAAESGGKCKCGTSCPCVNCTC 62          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3_PRUAV (Metallothionein-like protein 1 OS=Prunus avium GN=MT1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 2.664e-16
Identity = 38/65 (58.46%), Postives = 45/65 (69.23%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCAC 287
            MS  C NCDC+D SQC KKG S+    VET+   + TV+ MD  AAE  GNCKCGP+CACV+C C
Sbjct:    1 MSSKCSNCDCSDSSQCTKKGYSFDLVIVETENRSMDTVI-MDAPAAENGGNCKCGPSCACVDCKC 64          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3_MALDO (Metallothionein-like protein type 3 OS=Malus domestica GN=MT2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.012e-15
Identity = 38/66 (57.58%), Postives = 45/66 (68.18%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACG 290
            MS  C NCDCAD +QCVKKG+SY    VET+   + TV V D  AAE +G CKCG  C+CV+C CG
Sbjct:    1 MSGKCDNCDCADSTQCVKKGNSYDLVIVETENRSMDTVFV-DAPAAEHDGKCKCGTGCSCVSCTCG 65          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSJ (Metallothionein-like protein 3A OS=Oryza sativa subsp. japonica GN=MT3A PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.012e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACG 290
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3A_ORYSI (Metallothionein-like protein 3A OS=Oryza sativa subsp. indica GN=MT3A PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.012e-15
Identity = 36/66 (54.55%), Postives = 43/66 (65.15%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACG 290
            MSD CGNCDCAD+SQCVKKG+SY    VE + S        +V A E  G CKCG +C+C +C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVEAEKSHFE-----EVAAGEENGGCKCGTSCSCTDCKCG 61          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSJ (Metallothionein-like protein 3B OS=Oryza sativa subsp. japonica GN=MT3B PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.757e-13
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACG 290
            MSD CGNCDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGNCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
BLAST of DR405993 vs. ExPASy Swiss-Prot
Match: MT3B_ORYSI (Metallothionein-like protein 3B OS=Oryza sativa subsp. indica GN=MT3B PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.048e-12
Identity = 32/66 (48.48%), Postives = 41/66 (62.12%), Query Frame = 3
Query:   93 MSDTCGNCDCADRSQCVKKGSSYAADFVETDLSFVSTVVVMDVQAAEAEGNCKCGPTCACVNCACG 290
            MSD CG+CDCAD+SQCVKKG+SY    V+ + S     +  +V   E +G CKC   C+C  C CG
Sbjct:    1 MSDKCGHCDCADKSQCVKKGTSYGVVIVDAEKSHFE--MAEEVGYEENDGKCKCTTGCSCAGCNCG 64          
The following BLAST results are available for this feature:
BLAST of DR405993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
MT3_CARPA6.547e-2368.18Metallothionein-like protein type 3 OS=Carica papa... [more]
MT3_MUSAC7.491e-1960.94Metallothionein-like protein type 3 OS=Musa acumin... [more]
MT3_ACTDE3.718e-1866.15Metallothionein-like protein type 3 OS=Actinidia d... [more]
MT3_PRUAV2.664e-1658.46Metallothionein-like protein 1 OS=Prunus avium GN=... [more]
MT3_MALDO1.012e-1557.58Metallothionein-like protein type 3 OS=Malus domes... [more]
MT3A_ORYSJ1.012e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3A_ORYSI1.012e-1554.55Metallothionein-like protein 3A OS=Oryza sativa su... [more]
MT3B_ORYSJ2.757e-1350.00Metallothionein-like protein 3B OS=Oryza sativa su... [more]
MT3B_ORYSI1.048e-1248.48Metallothionein-like protein 3B OS=Oryza sativa su... [more]
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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248G12 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405993 ID=DR405993; Name=DR405993; organism=Citrus sinensis; type=EST; length=579bp
GGGGATATCATCACAGCAAAGTAAAGCAAGTTTCGTACAATAAAGAGCCC
TCTATTTCCAGTNNNAAGTTCTAAGTTCTAAGCTCAATCAACATGTCGGA
CACCTGCGGCAACTGCGACTGCGCTGACAGGAGCCAGTGTGTGAAGAAGG
GAAGCAGCTATGCTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGC
ACCGTTGTTGTCATGGACGTTCAGGCTGCTGAGGCTGAAGGTAACTGCAA
GTGCGGCCCCACCTGCGCTTGTGTGAACTGCGCTTGTGGTAGTCACTAAT
AAGCAAACACATGCAGCAAAAAATAAGAAGCTGCAAGTGTGCCTAAATAT
TGTGGGGGCTAAGAATAATGTAAGGGTGATTAAAAAAAAAAAGAAAAATT
CTCTACTTCGTTTTTATGATGGTCTACTACTAGTGTGTGGAGTGATGTGC
GTGTTGTGTCACCCATCACTCGTAATGTTTTGTGTTTCCTTCTTCATAAT
CATGTAATATATGGCCATGGCCATGACCGTGGCCTTGTGTGGTTTAATCT
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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