DR405910

Overview
NameDR405910
Unique NameDR405910
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length645
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:56..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 4.159e-67
Identity = 119/148 (80.41%), Postives = 133/148 (89.86%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQRGL+GE+I RFEKKGF+LKGLKL++V+R FAEKH EDLSSK FF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPA S PGTIRGD AI  GRN+IHGSDSVESA+KEIALWFPDGP+NWQSS+HPW+YE
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAASEPGTIRGDFAIDIGRNVIHGSDSVESARKEIALWFPDGPVNWQSSVHPWVYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 6.005e-66
Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            ME TFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVD+ FAEKH  DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G  NW SSLHPWIYE
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESAKKEIALWFPEGVANWSSSLHPWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.338e-65
Identity = 120/148 (81.08%), Postives = 131/148 (88.51%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKH  DLS+KPFF  L++YI SGPVVAM+WEG+GVV TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHSWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 1.747e-65
Identity = 120/148 (81.08%), Postives = 129/148 (87.16%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQ GLVGEII RFEKKGFSLKGLKL+TVDR FAEKH  DLSSKPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+SAPGTIRGD AI  GRN+IHGSD+VESA+K I LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESAPGTIRGDFAIDIGRNVIHGSDAVESARKVIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 248.44 bits (633), Expect = 2.282e-65
Identity = 119/148 (80.41%), Postives = 128/148 (86.49%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKH  DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR IIGATNP  S PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G +NWQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVESATKEIALWFPEGVVNWQSSLHSWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 3.892e-65
Identity = 118/148 (79.73%), Postives = 130/148 (87.84%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQRGLVGEII RFEKKGF+LKGLKL+TVD+ FAEKH  DLS+KPFF  L+EYI SGPVVAM+WEG+ VV TGR IIGATNPA+S PGTIRGD AI  GRN+IHGSD+VESA+KEI LWFP+G  NW SSLHPWIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESPPGTIRGDFAIDIGRNVIHGSDAVESAKKEIGLWFPEGVANWSSSLHPWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.083e-65
Identity = 119/148 (80.41%), Postives = 131/148 (88.51%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLKGLKL+TVDR FAEKH  DLS+KPFF  L+EYI SGPVV+M+WEG+GV+ TGR IIGATNP +SAPGTIRGD AI  GRN+IHGSD+VESA+KEIALWFP+G   WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESAPGTIRGDYAIDIGRNVIHGSDAVESARKEIALWFPEGVAEWQSSLHCWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 8.671e-65
Identity = 117/148 (79.05%), Postives = 128/148 (86.49%), Query Frame = 2
Query:   77 MEQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            MEQTFIMIKPDGVQRGLVGEII RFEKKGFSLK LK + VDRPFAEKH  DLS+KPFF  L+EYI SGPVVAM+WEG+GVV TGR +IGATNP  S PGTIRGD AI  GRN+IHGSD+V+SA KEIALWFPDG ++WQSSLH WIYE
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLASEPGTIRGDFAIDIGRNVIHGSDAVDSATKEIALWFPDGVVHWQSSLHSWIYE 148          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.479e-64
Identity = 119/147 (80.95%), Postives = 128/147 (87.07%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            EQTFIMIKPDGVQRGL+GEII RFEKKGF LKGLKL+TVDRPFAEKH  DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+GP N QSS H WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGPANCQSSQHSWIYE 149          
BLAST of DR405910 vs. ExPASy Swiss-Prot
Match: NDK1_PEA (Nucleoside diphosphate kinase 1 OS=Pisum sativum GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 3.643e-63
Identity = 116/147 (78.91%), Postives = 126/147 (85.71%), Query Frame = 2
Query:   80 EQTFIMIKPDGVQRGLVGEIIIRFEKKGFSLKGLKLMTVDRPFAEKHCEDLSSKPFFGSLIEYITSGPVVAMIWEGEGVVKTGRTIIGATNPAQSAPGTIRGDLAIVTGRNIIHGSDSVESAQKEIALWFPDGPINWQSSLHPWIYE 520
            EQTFIMIKPDGVQRGLVGEII RFEKKGF LKGLK + V+R FAEKH  DLS+KPFF  L++YI SGPVVAMIWEG+ VV TGR IIGATNPAQS PGTIRGD AI  GRN+IHGSD+VESA KEIALWFP+G  NW+SSLH WIYE
Sbjct:    3 EQTFIMIKPDGVQRGLVGEIISRFEKKGFYLKGLKFVNVERAFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQSEPGTIRGDFAIDIGRNVIHGSDAVESANKEIALWFPEGAANWESSLHSWIYE 149          
The following BLAST results are available for this feature:
BLAST of DR405910 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDK1_ARATH4.159e-6780.41Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]
NDKB_FLABI6.005e-6681.08Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK1_TOBAC1.338e-6581.08Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDKA_FLABI1.747e-6581.08Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_MESCR2.282e-6580.41Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK_HELAN3.892e-6579.73Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK_CAPAN5.083e-6580.41Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SPIOL8.671e-6579.05Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK1_SOYBN1.479e-6480.95Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDK1_PEA3.643e-6378.91Nucleoside diphosphate kinase 1 OS=Pisum sativum G... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248C13 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248C13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405910 ID=DR405910; Name=DR405910; organism=Citrus sinensis; type=EST; length=645bp
GGGGATTCTCTCGCATGTGTGCTGTGCTATTTCACTCAATTCTCAAAACA
AGTTGGTTTCTCTGAATCTCAAAGAAATGGAACAAACTTTCATCATGATC
AAGCCCGATGGGGTCCAAAGAGGCCTTGTTGGTGAAATCATCATCAGATT
TGAGAAGAAGGGTTTCTCTTTGAAGGGTTTGAAGCTTATGACTGTGGACC
GCCCTTTTGCTGAGAAGCACTGTGAGGATTTGTCATCGAAGCCTTTCTTT
GGTTCTCTGATTGAGTACATTACCTCTGGTCCTGTTGTTGCTATGATTTG
GGAGGGTGAAGGTGTTGTTAAGACTGGCCGCACTATTATTGGAGCCACCA
ACCCTGCGCAGTCTGCTCCTGGAACCATCCGTGGTGATTTGGCTATCGTG
ACGGGCAGGAATATTATCCATGGAAGTGACTCAGTTGAGAGTGCCCAGAA
AGAAATCGCCTTGTGGTTCCCTGATGGCCCTATTAACTGGCAGAGCAGCC
TTCACCCTTGGATCTATGAGTAAACTAATGTTTGGTTGAGGAGCCTAATT
GTTCCTGCAGTTAGACTTATCCCTATCCCTATCCCTATTTCCTTATTTAT
GGTTACTCCTTGTTGGTGAACTGTTATGAAGTATTGAGTTAAATT
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