DR405904

Overview
NameDR405904
Unique NameDR405904
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length721
Libraries
Library NameType
Mature Juice Sac from Navel Orange in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6303 contig Csv1_Contig6303:1..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH30_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana GN=XTH30 PE=2 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 2.063e-76
Identity = 127/172 (73.84%), Postives = 153/172 (88.95%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWDA 721
            +SF+E  S LFGD NL+RSPD  +VRLLL+R++GSGF+SS +Y HGF+S+MIKLP+D+TAG+ VAFYTSNGDVF KTHDELD EFLGN+ GKPWRFQTN YGNGST RGREERY+LWFDP+K+FHRYSILWT + IIF+VD+VPIREV+R+ AMG D+P+KPM+LY TIWDA
Sbjct:   30 LSFEESLSPLFGDANLVRSPDDLSVRLLLDRYTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFYTSNGDVFEKTHDELDIEFLGNIKGKPWRFQTNLYGNGSTHRGREERYRLWFDPSKEFHRYSILWTPHKIIFWVDDVPIREVIRNDAMGADYPAKPMALYATIWDA 201          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH29_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana GN=XTH29 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.597e-76
Identity = 127/172 (73.84%), Postives = 150/172 (87.21%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWDA 721
            I FDEG SHLFG+GNLIRSPD ++VRLLL++++GSGF+SS +Y HGFFS++IKLP  +TAG+ VAFYTSNGDVF K HDELD EFLGN+ GKPWRFQTN YGNGST RGREERY+LWFDP+K+FHRYSILWT   IIF+VD+VPIRE++R + M GD+P KPMSLY TIWDA
Sbjct:   38 IFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPGAYTAGIVVAFYTSNGDVFVKDHDELDIEFLGNLEGKPWRFQTNMYGNGSTNRGREERYRLWFDPSKEFHRYSILWTPTKIIFWVDDVPIREILRKEEMNGDYPQKPMSLYATIWDA 209          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH28_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana GN=XTH28 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.584e-68
Identity = 117/171 (68.42%), Postives = 143/171 (83.63%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWD 718
            I FDEGY+ LFGD NLI   DGK+VRL L+  +GSGFVS+ +Y HGFFS+ IKLP+D++AG+ +AFY SNGD++ K HDE+DFEFLGN+ G+ WR QTN YGNGST  GREERY LWFDPT+ FH+YSILW+ ++IIFYVD VPIREV R+ +MGGDFP+KPMSLY+TIWD
Sbjct:   29 IQFDEGYTQLFGDQNLIVHRDGKSVRLTLDERTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFYLSNGDLYEKNHDEIDFEFLGNIRGREWRIQTNIYGNGSTHLGREERYNLWFDPTEDFHQYSILWSLSHIIFYVDNVPIREVKRTASMGGDFPAKPMSLYSTIWD 199          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH27_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana GN=XTH27 PE=2 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.653e-67
Identity = 118/170 (69.41%), Postives = 137/170 (80.59%), Query Frame = 2
Query:  209 SFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWD 718
            SF+E Y+ LFGD NL    DGK+VRL L+  +GSGFVS+  Y HGFFSA IKLPSD+TAG+ VAFY SNGD++ K HDE+DFEFLGN+  K WR QTN YGNGST  GREERY LWFDPT+ FH+YSILW+ ++IIF+VD VPIREV R+  MGG FPSKPMSLYTTIWD
Sbjct:   30 SFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPSDYTAGVVVAFYMSNGDMYEKNHDEIDFEFLGNIREKEWRVQTNIYGNGSTHSGREERYNLWFDPTEDFHQYSILWSDSHIIFFVDNVPIREVKRTAEMGGHFPSKPMSLYTTIWD 199          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH33_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 33 OS=Arabidopsis thaliana GN=XTH33 PE=2 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 2.720e-44
Identity = 79/171 (46.20%), Postives = 112/171 (65.50%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWD 718
            I+ + G+S  FG  N+    +G   +L L++ SG+G VS   Y++GFFSA +KLP+   +G+ VAFY SN + +PK+HDE+D E LG      W  QTN Y NGST  GREE++  WFDPT+ FH Y+++W S++ +F VD +P+R+     A    +PSKPMSLY T+WD
Sbjct:   41 IAIENGFSRRFGAHNI--QVNGSLAKLTLDKSSGAGLVSKNKYHYGFFSARLKLPAGFASGVVVAFYLSNAETYPKSHDEIDIELLGRSRRDDWTIQTNVYANGSTRTGREEKFYFWFDPTQAFHDYTLIWNSHHTVFLVDNIPVRQFPNRGAFTSAYPSKPMSLYVTVWD 209          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH2_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 2 OS=Arabidopsis thaliana GN=XTH2 PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.308e-38
Identity = 83/172 (48.26%), Postives = 105/172 (61.05%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFY-TSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWD 718
            I FD  Y   +G  ++++   GK V+L ++  SGSGF S   Y  GFF   IKLP   +AG+  AFY TS GD    THDE+DFEFLGN  GKP   QTN + NG    GRE+++  WFDPT  FH Y ILW    I+FYVD+VPIR     K  G ++PSKPM L  ++W+
Sbjct:   30 IDFDVNYVVTWGQDHILKLNQGKEVQLSMDYSSGSGFESKSHYGSGFFQMRIKLPPRDSAGVVTAFYLTSKGD----THDEVDFEFLGNRQGKPIAIQTNVFSNGQG--GREQKFVPWFDPTTSFHTYGILWNPYQIVFYVDKVPIRVFKNIKKSGVNYPSKPMQLVASLWN 195          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH32_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 32 OS=Arabidopsis thaliana GN=XTH32 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 2.726e-36
Identity = 79/175 (45.14%), Postives = 108/175 (61.71%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGS---TARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWDA 721
            ++F +G+ +L+G  +  +  D   + + L+R SGSGF S K +  G+F A IKL   +TAG+  + Y SN +  P  HDE+D EFLG   GKP+  QTN Y  GS      GRE +++LWFDPTK FH Y+ILW+   IIF VD++PIR   +  A    FP +PM LY +IWDA
Sbjct:   41 LNFYKGFRNLWGPQH--QRMDQNALTIWLDRTSGSGFKSVKPFRSGYFGANIKLQPGYTAGVITSLYLSNNEAHPGFHDEVDIEFLGTTFGKPYTLQTNVYIRGSGDGKIIGREMKFRLWFDPTKDFHHYAILWSPREIIFLVDDIPIRRYPKKSA--STFPLRPMWLYGSIWDA 211          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH1_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana GN=XTH1 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.036e-35
Identity = 76/172 (44.19%), Postives = 105/172 (61.05%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFY-TSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWD 718
            + FD+ Y   +G  N+++   GK V+L L+  SGSGF S   Y  GFF   IK+P   T+G+  AFY TS G+    THDE+DFEFLGN  GK    QTN + NG     RE++  LWFDP+K FH Y+ILW    I+ YVD +P+R    + + G ++PSKPM +  ++W+
Sbjct:   37 VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTSGVVTAFYLTSKGN----THDEVDFEFLGNKEGK-LAVQTNVFTNGKG--NREQKLALWFDPSKDFHTYAILWNPYQIVLYVDNIPVRVFKNTTSQGMNYPSKPMQVVVSLWN 201          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH31_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 31 OS=Arabidopsis thaliana GN=XTH31 PE=2 SV=2)

HSP 1 Score: 148.673 bits (374), Expect = 3.014e-35
Identity = 79/173 (45.66%), Postives = 103/173 (59.54%), Query Frame = 2
Query:  212 FDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTAR---GREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFPSKPMSLYTTIWDA 721
            FD  +  L+G  +  R  D   V L L++ +GSGF S + Y  G+F A IKL    TAG+  + Y SN    P  HDE+D EFLG   GKP+  QTN +  GS  R   GRE ++ LWFDPT+ FH Y+ILW  N I+F+VD+VPIR   R       FP++PM +Y +IWDA
Sbjct:   39 FDREFRTLWGSQHQRREQDV--VTLWLDKSTGSGFKSLRPYRSGYFGASIKLQPGFTAGVDTSLYLSNNQEHPGDHDEVDIEFLGTTPGKPYSLQTNVFVRGSGDRNVIGREMKFTLWFDPTQDFHHYAILWNPNQIVFFVDDVPIRTYNRKNE--AIFPTRPMWVYGSIWDA 207          
BLAST of DR405904 vs. ExPASy Swiss-Prot
Match: XTH_TOBAC (Probable xyloglucan endotransglucosylase/hydrolase protein OS=Nicotiana tabacum GN=XTH PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33
Identity = 74/173 (42.77%), Postives = 105/173 (60.69%), Query Frame = 2
Query:  206 ISFDEGYSHLFGDGNLIRSPDGKNVRLLLNRFSGSGFVSSKLYNHGFFSAMIKLPSDHTAGLCVAFYTSNGDVFPKTHDELDFEFLGNVAGKPWRFQTNFYGNGSTARGREERYQLWFDPTKQFHRYSILWTSNNIIFYVDEVPIREVVRSKAMGGDFP-SKPMSLYTTIWDA 721
            + F + Y   +   ++     G  V L+L+R SG+GF S K Y  G FS  +KL    +AG+  AFY S+ +     HDE+DFEFLGN  G+P+  QTN +  G     RE+R  LWFDPTK +H YS+LW +  I+ +VD+VPIR    SK +G  FP ++PM +Y+++WDA
Sbjct:   30 VPFWKNYEPSWASHHIKYLSGGSTVDLVLDRSSGAGFQSKKSYLFGHFSMKLKLVGGDSAGVVTAFYLSSNNA---EHDEIDFEFLGNRTGQPYILQTNVFTGGKG--DREQRIYLWFDPTKGYHSYSVLWNTFQIVIFVDDVPIRAFKNSKDLGVKFPFNQPMKIYSSLWDA 197          
The following BLAST results are available for this feature:
BLAST of DR405904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
XTH30_ARATH2.063e-7673.84Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH29_ARATH4.597e-7673.84Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH28_ARATH1.584e-6868.42Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH27_ARATH6.653e-6769.41Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH33_ARATH2.720e-4446.20Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH2_ARATH1.308e-3848.26Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH32_ARATH2.726e-3645.14Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH1_ARATH1.036e-3544.19Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH31_ARATH3.014e-3545.66Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH_TOBAC1.654e-3342.77Probable xyloglucan endotransglucosylase/hydrolase... [more]

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Properties
Property NameValue
Genbank descriptionCSAJ-PNP1248C05 Mature Juice Sac from Navel Orange in pTriplEx2 vector Citrus sinensis cDNA clone CSAJ-PNP1248C05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR405904 ID=DR405904; Name=DR405904; organism=Citrus sinensis; type=EST; length=721bp
GGGGAACACACACCGTAACAAATTTTATTTATAGAAACCAAAAATAATAA
TGGATTGGTTTCTTTGCTCTCAATCAAAAAAATCATCAGCACCCTTCACT
CTAATTCTAATTCTGTTGTGTTGCTGCTCATCACCATCACTTGTGTTCAC
ATTCACAAACGCAGCGTCGTCGTTGTCGTCATCATCTGCTTTCAACCTCG
CCACCATCTCTTTCGATGAAGGCTACTCTCATCTTTTCGGCGACGGCAAT
CTCATTCGCTCCCCCGACGGCAAGAACGTTCGTCTCCTCCTCAACCGCTT
CTCCGGGTCCGGTTTTGTTTCGTCAAAGTTGTACAATCACGGGTTCTTTA
GCGCCATGATCAAGTTGCCATCGGATCACACGGCTGGCTTATGTGTTGCA
TTCTATACGTCAAACGGAGACGTGTTCCCAAAAACACACGACGAATTAGA
CTTTGAGTTTCTAGGAAACGTGGCTGGAAAACCGTGGAGGTTCCAAACAA
ATTTCTATGGAAATGGGAGCACGGCACGTGGCAGAGAAGAGAGATACCAG
CTTTGGTTTGATCCCACGAAGCAATTTCATAGATATAGCATTCTTTGGAC
AAGCAACAACATTATATTCTATGTGGATGAAGTACCGATAAGGGAAGTCG
TGCGCTCAAAGGCAATGGGTGGTGATTTCCCATCAAAGCCAATGTCATTG
TACACAACAATTTGGGATGCC
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